RNA–Protein interactions for RNA: ENST00000490751.1

LDB1-204, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-204ENST00000490751 ZNF594Q96JF6 807 aaPredicted RBP39.61■■■■□ 3.93
LDB1-204ENST00000490751 COA1Q9GZY4 146 aa39.61■■■■□ 3.93
LDB1-204ENST00000490751 HSPA1AP0DMV8 641 aaKnown RBP39.6■■■■□ 3.93
LDB1-204ENST00000490751 HSPA1BP0DMV9 641 aaKnown RBP39.6■■■■□ 3.93
LDB1-204ENST00000490751 VEGFBP49765 207 aa39.6■■■■□ 3.93
LDB1-204ENST00000490751 KIF4BQ2VIQ3 1234 aa39.6■■■■□ 3.93
LDB1-204ENST00000490751 DEFB115Q30KQ5 88 aa39.6■■■■□ 3.93
LDB1-204ENST00000490751 KAZALD1Q96I82 304 aa39.6■■■■□ 3.93
LDB1-204ENST00000490751 TAF5LO75529 589 aa39.58■■■■□ 3.93
LDB1-204ENST00000490751 CT47B1P0C2W7 299 aaPredicted RBP39.58■■■■□ 3.93
LDB1-204ENST00000490751 DIEXFQ68CQ4 756 aaKnown RBP39.58■■■■□ 3.93
LDB1-204ENST00000490751 HELBQ8NG08 1087 aaPredicted RBP39.58■■■■□ 3.93
LDB1-204ENST00000490751 GMLQ99445 158 aa39.58■■■■□ 3.93
LDB1-204ENST00000490751 POLR2AP24928 1970 aaKnown RBP39.57■■■■□ 3.92
LDB1-204ENST00000490751 SNAP23O00161 211 aa39.56■■■■□ 3.92
LDB1-204ENST00000490751 CELF2O95319 508 aaKnown RBP39.56■■■■□ 3.92
LDB1-204ENST00000490751 ZNF280AP59817 542 aaPredicted RBP39.56■■■■□ 3.92
LDB1-204ENST00000490751 LDHAL6AQ6ZMR3 332 aa39.56■■■■□ 3.92
LDB1-204ENST00000490751 FBXW7Q969H0 707 aa39.56■■■■□ 3.92
LDB1-204ENST00000490751 USP48Q86UV5 1035 aa39.55■■■■□ 3.92
LDB1-204ENST00000490751 MIER1Q8N108 512 aa39.55■■■■□ 3.92
LDB1-204ENST00000490751 CNNM1Q9NRU3 951 aa39.55■■■■□ 3.92
LDB1-204ENST00000490751 USP17L8P0C7I0 530 aa39.54■■■■□ 3.92
LDB1-204ENST00000490751 DACT2Q5SW24 774 aa39.54■■■■□ 3.92
LDB1-204ENST00000490751 BICC1Q9H694 974 aaKnown RBP39.54■■■■□ 3.92
LDB1-204ENST00000490751 ZNF408Q9H9D4 720 aa39.53■■■■□ 3.92
LDB1-204ENST00000490751 IRS2Q9Y4H2 1338 aa39.52■■■■□ 3.92
LDB1-204ENST00000490751 STRIP1Q5VSL9 837 aa39.52■■■■□ 3.92
LDB1-204ENST00000490751 DCPSQ96C86 337 aaKnown RBP39.52■■■■□ 3.92
LDB1-204ENST00000490751 MXD3Q9BW11 206 aa39.52■■■■□ 3.92
LDB1-204ENST00000490751 TLL2Q9Y6L7 1015 aa39.52■■■■□ 3.92
LDB1-204ENST00000490751 KRT26Q7Z3Y9 468 aa39.51■■■■□ 3.92
LDB1-204ENST00000490751 RABL6Q3YEC7 729 aaPredicted RBP39.5■■■■□ 3.91
LDB1-204ENST00000490751 GGA3Q9NZ52 723 aa39.5■■■■□ 3.91
LDB1-204ENST00000490751 ASTN2O75129 1339 aaPredicted RBP39.49■■■■□ 3.91
LDB1-204ENST00000490751 MYO3BQ8WXR4 1341 aa39.49■■■■□ 3.91
LDB1-204ENST00000490751 WDR33Q9C0J8 1336 aaKnown RBP39.49■■■■□ 3.91
LDB1-204ENST00000490751 PLIN1O60240 522 aa39.49■■■■□ 3.91
LDB1-204ENST00000490751 DLK2Q6UY11 383 aa39.49■■■■□ 3.91
LDB1-204ENST00000490751 C15orf52Q6ZUT6 534 aaKnown RBP39.49■■■■□ 3.91
LDB1-204ENST00000490751 PAXIP1Q6ZW49 1069 aaPredicted RBP39.49■■■■□ 3.91
LDB1-204ENST00000490751 USP44Q9H0E7 712 aa39.49■■■■□ 3.91
LDB1-204ENST00000490751 MYOZ2Q9NPC6 264 aa39.49■■■■□ 3.91
LDB1-204ENST00000490751 ANKRD44Q8N8A2 993 aa39.48■■■■□ 3.91
LDB1-204ENST00000490751 CD209Q9NNX6 404 aa39.48■■■■□ 3.91
LDB1-204ENST00000490751 ADM5C9JUS6 153 aa39.47■■■■□ 3.91
LDB1-204ENST00000490751 TTLL5Q6EMB2 1281 aa39.47■■■■□ 3.91
LDB1-204ENST00000490751 NOB1Q9ULX3 412 aaKnown RBP39.47■■■■□ 3.91
LDB1-204ENST00000490751 SCARF1Q14162 830 aa39.46■■■■□ 3.91
LDB1-204ENST00000490751 SAPCD2Q86UD0 394 aa39.46■■■■□ 3.91
LDB1-204ENST00000490751 PUS3Q9BZE2 481 aaKnown RBP39.46■■■■□ 3.91
LDB1-204ENST00000490751 BRPF1P55201 1214 aaPredicted RBP39.45■■■■□ 3.91
LDB1-204ENST00000490751 GTF2IP78347 998 aa39.45■■■■□ 3.91
LDB1-204ENST00000490751 CAPNS2Q96L46 248 aa39.45■■■■□ 3.91
LDB1-204ENST00000490751 CYP4F22Q6NT55 531 aa39.44■■■■□ 3.9
LDB1-204ENST00000490751 SULF1Q8IWU6 871 aa39.44■■■■□ 3.9
LDB1-204ENST00000490751 THSD7BQ9C0I4 1608 aa39.43■■■■□ 3.9
LDB1-204ENST00000490751 ECE1P42892 770 aa39.43■■■■□ 3.9
LDB1-204ENST00000490751 RARSP54136 660 aaKnown RBP39.43■■■■□ 3.9
LDB1-204ENST00000490751 ANGEL2Q5VTE6 544 aaKnown RBP39.43■■■■□ 3.9
LDB1-204ENST00000490751 ZNF804AQ7Z570 1209 aa39.43■■■■□ 3.9
LDB1-204ENST00000490751 GRM1Q13255 1194 aa39.42■■■■□ 3.9
LDB1-204ENST00000490751 OGFOD1Q8N543 542 aa39.42■■■■□ 3.9
LDB1-204ENST00000490751 API5Q9BZZ5 524 aaKnown RBP39.42■■■■□ 3.9
LDB1-204ENST00000490751 COL13A1Q5TAT6 717 aaPredicted RBP39.4■■■■□ 3.9
LDB1-204ENST00000490751 RIPOR2Q9Y4F9 1068 aa39.4■■■■□ 3.9
LDB1-204ENST00000490751 IL1R1P14778 569 aa39.38■■■■□ 3.89
LDB1-204ENST00000490751 UBE4AQ14139 1066 aa39.38■■■■□ 3.89
LDB1-204ENST00000490751 KIAA0825Q8IV33 1275 aa39.38■■■■□ 3.89
LDB1-204ENST00000490751 MROH5Q6ZUA9 1318 aa39.38■■■■□ 3.89
LDB1-204ENST00000490751 AIDAQ96BJ3 306 aa39.37■■■■□ 3.89
LDB1-204ENST00000490751 HHIPL1Q96JK4 782 aa39.37■■■■□ 3.89
LDB1-204ENST00000490751 WBP1LQ9NX94 342 aa39.37■■■■□ 3.89
LDB1-204ENST00000490751 FOXN1O15353 648 aa39.36■■■■□ 3.89
LDB1-204ENST00000490751 HNRNPUQ00839 825 aaKnown RBP eCLIP39.36■■■■□ 3.89
LDB1-204ENST00000490751 NBPF9Q3BBW0 867 aa39.36■■■■□ 3.89
LDB1-204ENST00000490751 IFFO2Q5TF58 517 aa39.36■■■■□ 3.89
LDB1-204ENST00000490751 KIF16BQ96L93 1317 aa39.36■■■■□ 3.89
LDB1-204ENST00000490751 PITPNM2Q9BZ72 1349 aa39.36■■■■□ 3.89
LDB1-204ENST00000490751 MMP14P50281 582 aa39.35■■■■□ 3.89
LDB1-204ENST00000490751 LRRC24Q50LG9 513 aa39.35■■■■□ 3.89
LDB1-204ENST00000490751 GBA2Q9HCG7 927 aaPredicted RBP39.35■■■■□ 3.89
LDB1-204ENST00000490751 HDAC9Q9UKV0 1011 aa39.35■■■■□ 3.89
LDB1-204ENST00000490751 KLHDC4Q8TBB5 520 aa39.34■■■■□ 3.89
LDB1-204ENST00000490751 CDCA5Q96FF9 252 aa39.34■■■■□ 3.89
LDB1-204ENST00000490751 WNT10BO00744 389 aa39.33■■■■□ 3.89
LDB1-204ENST00000490751 UBTFL1P0CB47 393 aaPredicted RBP39.33■■■■□ 3.89
LDB1-204ENST00000490751 HUNKP57058 714 aa39.33■■■■□ 3.89
LDB1-204ENST00000490751 CERS5Q8N5B7 392 aa39.33■■■■□ 3.89
LDB1-204ENST00000490751 MAP2K1Q02750 393 aaPredicted RBP39.32■■■■□ 3.89
LDB1-204ENST00000490751 METTL24Q5JXM2 366 aa39.32■■■■□ 3.89
LDB1-204ENST00000490751 C2orf69Q8N8R5 385 aa39.32■■■■□ 3.89
LDB1-204ENST00000490751 SASH1O94885 1247 aa39.31■■■■□ 3.88
LDB1-204ENST00000490751 GYG1P46976 350 aa39.31■■■■□ 3.88
LDB1-204ENST00000490751 AOC2O75106 756 aa39.3■■■■□ 3.88
LDB1-204ENST00000490751 SCAF8Q9UPN6 1271 aaKnown RBP39.3■■■■□ 3.88
LDB1-204ENST00000490751 JAG2Q9Y219 1238 aa39.3■■■■□ 3.88
LDB1-204ENST00000490751 ARHGAP45Q92619 1136 aa39.29■■■■□ 3.88
LDB1-204ENST00000490751 HIBADHP31937 336 aaKnown RBP39.28■■■■□ 3.88
LDB1-204ENST00000490751 RFX5P48382 616 aaPredicted RBP39.28■■■■□ 3.88
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms