RNA–Protein interactions for RNA: ENST00000490733.1

EPCAM-206, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 3

Gene EPCAM, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-206ENST00000490733 GNAT3A8MTJ3 354 aa6.34□□□□□ -1.39
EPCAM-206ENST00000490733 CYP27B1O15528 508 aa6.34□□□□□ -1.39
EPCAM-206ENST00000490733 NEFMP07197 916 aa6.34□□□□□ -1.39
EPCAM-206ENST00000490733 FBXO45P0C2W1 286 aa6.34□□□□□ -1.39
EPCAM-206ENST00000490733 ZNF853P0CG23 659 aa6.34□□□□□ -1.39
EPCAM-206ENST00000490733 TATP17735 454 aaPredicted RBP6.34□□□□□ -1.39
EPCAM-206ENST00000490733 CBLBQ13191 982 aa6.34□□□□□ -1.39
EPCAM-206ENST00000490733 PLEKHO1Q53GL0 409 aaPredicted RBP6.34□□□□□ -1.39
EPCAM-206ENST00000490733 C6orf118Q5T5N4 469 aa6.34□□□□□ -1.39
EPCAM-206ENST00000490733 DZIP3Q86Y13 1208 aaKnown RBP6.34□□□□□ -1.39
EPCAM-206ENST00000490733 UNC5CLQ8IV45 518 aa6.34□□□□□ -1.39
EPCAM-206ENST00000490733 LINC00528Q8N1L1 170 aa6.34□□□□□ -1.39
EPCAM-206ENST00000490733 FBXO41Q8TF61 875 aa6.34□□□□□ -1.39
EPCAM-206ENST00000490733 RAPGEF4Q8WZA2 1011 aa6.34□□□□□ -1.39
EPCAM-206ENST00000490733 NGLY1Q96IV0 654 aa6.34□□□□□ -1.39
EPCAM-206ENST00000490733 LGR6Q9HBX8 967 aa6.34□□□□□ -1.39
EPCAM-206ENST00000490733 USP35Q9P2H5 1018 aa6.34□□□□□ -1.39
EPCAM-206ENST00000490733 EP400Q96L91 3159 aa6.34□□□□□ -1.4
EPCAM-206ENST00000490733 ITGB4P16144 1822 aa6.34□□□□□ -1.4
EPCAM-206ENST00000490733 THSD7AQ9UPZ6 1657 aa6.33□□□□□ -1.4
EPCAM-206ENST00000490733 IL16Q14005 1332 aa6.33□□□□□ -1.4
EPCAM-206ENST00000490733 FANCIQ9NVI1 1328 aa6.33□□□□□ -1.4
EPCAM-206ENST00000490733 SOBPA7XYQ1 873 aa6.33□□□□□ -1.4
EPCAM-206ENST00000490733 E9PSI1 815 aa6.33□□□□□ -1.4
EPCAM-206ENST00000490733 SOCS7O14512 581 aa6.33□□□□□ -1.4
EPCAM-206ENST00000490733 HTATSF1O43719 755 aaKnown RBP6.33□□□□□ -1.4
EPCAM-206ENST00000490733 IL2RBP14784 551 aa6.33□□□□□ -1.4
EPCAM-206ENST00000490733 PHKG2P15735 406 aa6.33□□□□□ -1.4
EPCAM-206ENST00000490733 VPS72Q15906 364 aa6.33□□□□□ -1.4
EPCAM-206ENST00000490733 NBPF20Q3BBV1 942 aa6.33□□□□□ -1.4
EPCAM-206ENST00000490733 AMOTQ4VCS5 1084 aa6.33□□□□□ -1.4
EPCAM-206ENST00000490733 AKAP4Q5JQC9 854 aa6.33□□□□□ -1.4
EPCAM-206ENST00000490733 ZNF530Q6P9A1 599 aaPredicted RBP6.33□□□□□ -1.4
EPCAM-206ENST00000490733 TSR2Q969E8 191 aaKnown RBP6.33□□□□□ -1.4
EPCAM-206ENST00000490733 MRC1P22897 1456 aa6.33□□□□□ -1.4
EPCAM-206ENST00000490733 ATRNO75882 1429 aa6.33□□□□□ -1.4
EPCAM-206ENST00000490733 KAT6BQ8WYB5 2073 aa6.32□□□□□ -1.4
EPCAM-206ENST00000490733 AFF2P51816 1311 aa6.32□□□□□ -1.4
EPCAM-206ENST00000490733 CHL1O00533 1208 aa6.32□□□□□ -1.4
EPCAM-206ENST00000490733 RNMTO43148 476 aaKnown RBP6.32□□□□□ -1.4
EPCAM-206ENST00000490733 BMP2P12643 396 aa6.32□□□□□ -1.4
EPCAM-206ENST00000490733 RAB15P59190 212 aa6.32□□□□□ -1.4
EPCAM-206ENST00000490733 DHX9Q08211 1270 aaKnown RBP6.32□□□□□ -1.4
EPCAM-206ENST00000490733 LMOD3Q0VAK6 560 aa6.32□□□□□ -1.4
EPCAM-206ENST00000490733 MPRIPQ6WCQ1 1025 aa6.32□□□□□ -1.4
EPCAM-206ENST00000490733 Q6ZVU0 165 aa6.32□□□□□ -1.4
EPCAM-206ENST00000490733 ZCRB1Q8TBF4 217 aaKnown RBP6.32□□□□□ -1.4
EPCAM-206ENST00000490733 TMPRSS4Q9NRS4 437 aa6.32□□□□□ -1.4
EPCAM-206ENST00000490733 MBIPQ9NS73 344 aa6.32□□□□□ -1.4
EPCAM-206ENST00000490733 IFT57Q9NWB7 429 aa6.32□□□□□ -1.4
EPCAM-206ENST00000490733 PGPEP1Q9NXJ5 209 aa6.32□□□□□ -1.4
EPCAM-206ENST00000490733 USP21Q9UK80 565 aa6.32□□□□□ -1.4
EPCAM-206ENST00000490733 SPG7Q9UQ90 795 aa6.32□□□□□ -1.4
EPCAM-206ENST00000490733 NDUFB9Q9Y6M9 179 aa6.32□□□□□ -1.4
EPCAM-206ENST00000490733 TNS2Q63HR2 1409 aa6.32□□□□□ -1.4
EPCAM-206ENST00000490733 BRWD3Q6RI45 1802 aa6.32□□□□□ -1.4
EPCAM-206ENST00000490733 DOT1LQ8TEK3 1739 aa6.31□□□□□ -1.4
EPCAM-206ENST00000490733 KRTAP4-8A0A0G2JLE6 195 aa6.31□□□□□ -1.4
EPCAM-206ENST00000490733 ESPNB1AK53 854 aa6.31□□□□□ -1.4
EPCAM-206ENST00000490733 UPP2O95045 317 aa6.31□□□□□ -1.4
EPCAM-206ENST00000490733 C1orf141Q5JVX7 400 aa6.31□□□□□ -1.4
EPCAM-206ENST00000490733 MEX3CQ5U5Q3 659 aaKnown RBP6.31□□□□□ -1.4
EPCAM-206ENST00000490733 IFNL2Q8IZJ0 200 aa6.31□□□□□ -1.4
EPCAM-206ENST00000490733 RTF1Q92541 710 aaKnown RBP6.31□□□□□ -1.4
EPCAM-206ENST00000490733 MIS18AQ9NYP9 233 aa6.31□□□□□ -1.4
EPCAM-206ENST00000490733 THRAP3Q9Y2W1 955 aaKnown RBP6.31□□□□□ -1.4
EPCAM-206ENST00000490733 PCDHB9Q9Y5E1 797 aa6.31□□□□□ -1.4
EPCAM-206ENST00000490733 PAPPAQ13219 1627 aa6.31□□□□□ -1.4
EPCAM-206ENST00000490733 UBR2Q8IWV8 1755 aa6.31□□□□□ -1.4
EPCAM-206ENST00000490733 RNF123Q5XPI4 1314 aa6.3□□□□□ -1.4
EPCAM-206ENST00000490733 PCDH11XQ9BZA7 1347 aa6.3□□□□□ -1.4
EPCAM-206ENST00000490733 PCDH11YQ9BZA8 1340 aa6.3□□□□□ -1.4
EPCAM-206ENST00000490733 ERVH48-1M5A8F1 160 aa6.3□□□□□ -1.4
EPCAM-206ENST00000490733 GNAI1P63096 354 aa6.3□□□□□ -1.4
EPCAM-206ENST00000490733 EXOSC9Q06265 439 aaKnown RBP6.3□□□□□ -1.4
EPCAM-206ENST00000490733 NR1H3Q13133 447 aa6.3□□□□□ -1.4
EPCAM-206ENST00000490733 KRT24Q2M2I5 525 aa6.3□□□□□ -1.4
EPCAM-206ENST00000490733 TSPYL6Q8N831 410 aa6.3□□□□□ -1.4
EPCAM-206ENST00000490733 ZNF784Q8NCA9 323 aaPredicted RBP6.3□□□□□ -1.4
EPCAM-206ENST00000490733 TSEN34Q9BSV6 310 aaKnown RBP6.3□□□□□ -1.4
EPCAM-206ENST00000490733 MYH16Q9H6N6 1097 aa6.3□□□□□ -1.4
EPCAM-206ENST00000490733 PODXL2Q9NZ53 605 aa6.3□□□□□ -1.4
EPCAM-206ENST00000490733 LAS1LQ9Y4W2 734 aaKnown RBP6.3□□□□□ -1.4
EPCAM-206ENST00000490733 C5P01031 1676 aa6.3□□□□□ -1.4
EPCAM-206ENST00000490733 SBF2Q86WG5 1849 aa6.29□□□□□ -1.4
EPCAM-206ENST00000490733 KCNQ3O43525 872 aa6.29□□□□□ -1.4
EPCAM-206ENST00000490733 GIGYF1O75420 1035 aaPredicted RBP6.29□□□□□ -1.4
EPCAM-206ENST00000490733 VEGFBP49765 207 aa6.29□□□□□ -1.4
EPCAM-206ENST00000490733 CALD1Q05682 793 aaKnown RBP6.29□□□□□ -1.4
EPCAM-206ENST00000490733 TAF7Q15545 349 aaPredicted RBP6.29□□□□□ -1.4
EPCAM-206ENST00000490733 MARCH10Q8NA82 808 aaPredicted RBP6.29□□□□□ -1.4
EPCAM-206ENST00000490733 C8orf58Q8NAV2 365 aa6.29□□□□□ -1.4
EPCAM-206ENST00000490733 DDX54Q8TDD1 881 aaKnown RBP6.29□□□□□ -1.4
EPCAM-206ENST00000490733 DCAF5Q96JK2 942 aa6.29□□□□□ -1.4
EPCAM-206ENST00000490733 AGBL1Q96MI9 1066 aa6.29□□□□□ -1.4
EPCAM-206ENST00000490733 CDCA7Q9BWT1 371 aaPredicted RBP6.29□□□□□ -1.4
EPCAM-206ENST00000490733 RGS17Q9UGC6 210 aaPredicted RBP6.29□□□□□ -1.4
EPCAM-206ENST00000490733 RCAN3Q9UKA8 241 aa6.29□□□□□ -1.4
EPCAM-206ENST00000490733 TBC1D2BQ9UPU7 963 aa6.29□□□□□ -1.4
EPCAM-206ENST00000490733 CCDC9Q9Y3X0 531 aaKnown RBP6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms