RNA–Protein interactions for RNA: ENST00000490653.1

PRPF4B-208, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 2

Gene PRPF4B, Length 581 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-208ENST00000490653 ERBB4Q15303 1308 aa9.54□□□□□ -0.88
PRPF4B-208ENST00000490653 HCLS1P14317 486 aaPredicted RBP9.53□□□□□ -0.88
PRPF4B-208ENST00000490653 VEGFBP49765 207 aa9.53□□□□□ -0.88
PRPF4B-208ENST00000490653 TCIRG1Q13488 830 aa9.53□□□□□ -0.88
PRPF4B-208ENST00000490653 PPP1R18Q6NYC8 613 aa9.53□□□□□ -0.88
PRPF4B-208ENST00000490653 NLRP10Q86W26 655 aa9.53□□□□□ -0.88
PRPF4B-208ENST00000490653 TSPYL6Q8N831 410 aa9.53□□□□□ -0.88
PRPF4B-208ENST00000490653 TAF1DQ9H5J8 278 aaPredicted RBP9.53□□□□□ -0.88
PRPF4B-208ENST00000490653 PHAXQ9H814 394 aaKnown RBP9.53□□□□□ -0.88
PRPF4B-208ENST00000490653 SALL2Q9Y467 1007 aaPredicted RBP9.53□□□□□ -0.88
PRPF4B-208ENST00000490653 ATP5J2-PTCD1G3V325 749 aa9.52□□□□□ -0.89
PRPF4B-208ENST00000490653 CRY2Q49AN0 593 aa9.52□□□□□ -0.89
PRPF4B-208ENST00000490653 SLC10A5Q5PT55 438 aa9.52□□□□□ -0.89
PRPF4B-208ENST00000490653 HDGFL1Q5TGJ6 251 aa9.52□□□□□ -0.89
PRPF4B-208ENST00000490653 TRAF7Q6Q0C0 670 aa9.52□□□□□ -0.89
PRPF4B-208ENST00000490653 NUDT18Q6ZVK8 323 aa9.52□□□□□ -0.89
PRPF4B-208ENST00000490653 UTP14AQ9BVJ6 771 aaKnown RBP9.52□□□□□ -0.89
PRPF4B-208ENST00000490653 NYXQ9GZU5 481 aa9.52□□□□□ -0.89
PRPF4B-208ENST00000490653 TAOK3Q9H2K8 898 aa9.52□□□□□ -0.89
PRPF4B-208ENST00000490653 V9GY48 417 aaPredicted RBP9.52□□□□□ -0.89
PRPF4B-208ENST00000490653 ALDH1B1P30837 517 aa9.51□□□□□ -0.89
PRPF4B-208ENST00000490653 HOXA10P31260 410 aaPredicted RBP9.51□□□□□ -0.89
PRPF4B-208ENST00000490653 CCDC93Q567U6 631 aa9.51□□□□□ -0.89
PRPF4B-208ENST00000490653 RTL5Q5HYW3 569 aaPredicted RBP9.51□□□□□ -0.89
PRPF4B-208ENST00000490653 PPP1R42Q7Z4L9 355 aa9.51□□□□□ -0.89
PRPF4B-208ENST00000490653 ZNF516Q92618 1163 aa9.51□□□□□ -0.89
PRPF4B-208ENST00000490653 JARID2Q92833 1246 aaPredicted RBP9.51□□□□□ -0.89
PRPF4B-208ENST00000490653 TSR2Q969E8 191 aaKnown RBP9.51□□□□□ -0.89
PRPF4B-208ENST00000490653 DICER1Q9UPY3 1922 aaKnown RBP9.5□□□□□ -0.89
PRPF4B-208ENST00000490653 NRG2O14511 850 aaPredicted RBP9.5□□□□□ -0.89
PRPF4B-208ENST00000490653 HSPA8P11142 646 aaKnown RBP9.5□□□□□ -0.89
PRPF4B-208ENST00000490653 FKBP4Q02790 459 aaKnown RBP eCLIP9.5□□□□□ -0.89
PRPF4B-208ENST00000490653 PARP10Q53GL7 1025 aa9.5□□□□□ -0.89
PRPF4B-208ENST00000490653 TTC13Q8NBP0 860 aa9.5□□□□□ -0.89
PRPF4B-208ENST00000490653 NLRP3Q96P20 1036 aa9.5□□□□□ -0.89
PRPF4B-208ENST00000490653 ISCA1Q9BUE6 129 aa9.5□□□□□ -0.89
PRPF4B-208ENST00000490653 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.5□□□□□ -0.89
PRPF4B-208ENST00000490653 IFT57Q9NWB7 429 aa9.5□□□□□ -0.89
PRPF4B-208ENST00000490653 TAF1P21675 1872 aa9.5□□□□□ -0.89
PRPF4B-208ENST00000490653 LTBP1Q14766 1721 aa9.5□□□□□ -0.89
PRPF4B-208ENST00000490653 LBX1P52954 281 aa9.49□□□□□ -0.89
PRPF4B-208ENST00000490653 GNAI1P63096 354 aa9.49□□□□□ -0.89
PRPF4B-208ENST00000490653 PLBD2Q8NHP8 589 aa9.49□□□□□ -0.89
PRPF4B-208ENST00000490653 RPGRQ92834 1020 aaKnown RBP9.49□□□□□ -0.89
PRPF4B-208ENST00000490653 FAM89AQ96GI7 184 aa9.49□□□□□ -0.89
PRPF4B-208ENST00000490653 RBM17Q96I25 401 aaKnown RBP9.49□□□□□ -0.89
PRPF4B-208ENST00000490653 CRAMP1Q96RY5 1269 aa9.49□□□□□ -0.89
PRPF4B-208ENST00000490653 MRS2Q9HD23 443 aa9.49□□□□□ -0.89
PRPF4B-208ENST00000490653 PRDM10Q9NQV6 1147 aa9.49□□□□□ -0.89
PRPF4B-208ENST00000490653 DBF4Q9UBU7 674 aaPredicted RBP9.49□□□□□ -0.89
PRPF4B-208ENST00000490653 TRMT112Q9UI30 125 aaKnown RBP9.49□□□□□ -0.89
PRPF4B-208ENST00000490653 ARFGEF2Q9Y6D5 1785 aa9.49□□□□□ -0.89
PRPF4B-208ENST00000490653 RNF40O75150 1001 aa9.48□□□□□ -0.89
PRPF4B-208ENST00000490653 HOXB7P09629 217 aa9.48□□□□□ -0.89
PRPF4B-208ENST00000490653 IARSP41252 1262 aaKnown RBP9.48□□□□□ -0.89
PRPF4B-208ENST00000490653 SOGA3Q5TF21 947 aa9.48□□□□□ -0.89
PRPF4B-208ENST00000490653 MAP1SQ66K74 1059 aaPredicted RBP9.48□□□□□ -0.89
PRPF4B-208ENST00000490653 G2E3Q7L622 706 aa9.48□□□□□ -0.89
PRPF4B-208ENST00000490653 LDHDQ86WU2 507 aa9.48□□□□□ -0.89
PRPF4B-208ENST00000490653 WWC1Q8IX03 1113 aa9.48□□□□□ -0.89
PRPF4B-208ENST00000490653 RTKN2Q8IZC4 609 aa9.48□□□□□ -0.89
PRPF4B-208ENST00000490653 WDR70Q9NW82 654 aa9.48□□□□□ -0.89
PRPF4B-208ENST00000490653 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.48□□□□□ -0.89
PRPF4B-208ENST00000490653 ABCC4O15439 1325 aa9.48□□□□□ -0.89
PRPF4B-208ENST00000490653 RASSF10A6NK89 507 aa9.47□□□□□ -0.89
PRPF4B-208ENST00000490653 FZD9O00144 591 aa9.47□□□□□ -0.89
PRPF4B-208ENST00000490653 PPEF1O14829 653 aaPredicted RBP9.47□□□□□ -0.89
PRPF4B-208ENST00000490653 ANP32CO43423 234 aa9.47□□□□□ -0.89
PRPF4B-208ENST00000490653 HSP90AB3PQ58FF7 597 aa9.47□□□□□ -0.89
PRPF4B-208ENST00000490653 RIC3Q7Z5B4 369 aa9.47□□□□□ -0.89
PRPF4B-208ENST00000490653 MYD88Q99836 296 aa9.47□□□□□ -0.89
PRPF4B-208ENST00000490653 HYPKQ9NX55 129 aa9.47□□□□□ -0.89
PRPF4B-208ENST00000490653 COL4A1P02462 1669 aa9.47□□□□□ -0.89
PRPF4B-208ENST00000490653 RNF123Q5XPI4 1314 aa9.47□□□□□ -0.89
PRPF4B-208ENST00000490653 IBTKQ9P2D0 1353 aaPredicted RBP9.47□□□□□ -0.89
PRPF4B-208ENST00000490653 LAMB2P55268 1798 aa9.46□□□□□ -0.9
PRPF4B-208ENST00000490653 TMEM88BA6NKF7 163 aa9.46□□□□□ -0.9
PRPF4B-208ENST00000490653 CST9Q5W186 159 aa9.46□□□□□ -0.9
PRPF4B-208ENST00000490653 FAM9BQ8IZU0 186 aa9.46□□□□□ -0.9
PRPF4B-208ENST00000490653 CELF1Q92879 486 aaKnown RBP9.46□□□□□ -0.9
PRPF4B-208ENST00000490653 ABHD8Q96I13 439 aa9.46□□□□□ -0.9
PRPF4B-208ENST00000490653 NPDC1Q9NQX5 325 aaPredicted RBP9.46□□□□□ -0.9
PRPF4B-208ENST00000490653 ATP6V0A2Q9Y487 856 aa9.46□□□□□ -0.9
PRPF4B-208ENST00000490653 SH3TC1Q8TE82 1336 aa9.46□□□□□ -0.9
PRPF4B-208ENST00000490653 EPHX2P34913 555 aa9.45□□□□□ -0.9
PRPF4B-208ENST00000490653 CTCFP49711 727 aaPredicted RBP9.45□□□□□ -0.9
PRPF4B-208ENST00000490653 SCNN1DP51172 638 aa9.45□□□□□ -0.9
PRPF4B-208ENST00000490653 AOC3Q16853 763 aa9.45□□□□□ -0.9
PRPF4B-208ENST00000490653 CCDC27Q2M243 656 aa9.45□□□□□ -0.9
PRPF4B-208ENST00000490653 SWT1Q5T5J6 900 aaKnown RBP9.45□□□□□ -0.9
PRPF4B-208ENST00000490653 PADI6Q6TGC4 694 aa9.45□□□□□ -0.9
PRPF4B-208ENST00000490653 SP8Q8IXZ3 490 aa9.45□□□□□ -0.9
PRPF4B-208ENST00000490653 CNTROBQ8N137 903 aa9.45□□□□□ -0.9
PRPF4B-208ENST00000490653 NKX2-3Q8TAU0 364 aa9.45□□□□□ -0.9
PRPF4B-208ENST00000490653 PSMD1Q99460 953 aa9.45□□□□□ -0.9
PRPF4B-208ENST00000490653 SEC31BQ9NQW1 1179 aa9.45□□□□□ -0.9
PRPF4B-208ENST00000490653 GJA3Q9Y6H8 435 aa9.45□□□□□ -0.9
PRPF4B-208ENST00000490653 RIC1Q4ADV7 1423 aa9.45□□□□□ -0.9
PRPF4B-208ENST00000490653 THSD7BQ9C0I4 1608 aa9.45□□□□□ -0.9
PRPF4B-208ENST00000490653 ANKRD36CQ5JPF3 1778 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms