RNA–Protein interactions for RNA: ENST00000490476.1

SSX2IP-208, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 3

Gene SSX2IP, Length 716 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-208ENST00000490476 TTC39BQ5VTQ0 682 aaPredicted RBP7.56□□□□□ -1.2
SSX2IP-208ENST00000490476 NLRP8Q86W28 1048 aa7.56□□□□□ -1.2
SSX2IP-208ENST00000490476 C1orf127Q8N9H9 656 aa7.56□□□□□ -1.2
SSX2IP-208ENST00000490476 CNTN3Q9P232 1028 aa7.56□□□□□ -1.2
SSX2IP-208ENST00000490476 KCNH4Q9UQ05 1017 aa7.56□□□□□ -1.2
SSX2IP-208ENST00000490476 EP400Q96L91 3159 aa7.55□□□□□ -1.2
SSX2IP-208ENST00000490476 DCDC2BA2VCK2 349 aa7.55□□□□□ -1.2
SSX2IP-208ENST00000490476 EREGO14944 169 aa7.55□□□□□ -1.2
SSX2IP-208ENST00000490476 KHNYNO15037 678 aaKnown RBP7.55□□□□□ -1.2
SSX2IP-208ENST00000490476 ATXN7O15265 892 aaPredicted RBP7.55□□□□□ -1.2
SSX2IP-208ENST00000490476 GADD45BO75293 160 aaPredicted RBP7.55□□□□□ -1.2
SSX2IP-208ENST00000490476 WFS1O76024 890 aa7.55□□□□□ -1.2
SSX2IP-208ENST00000490476 NLRP13Q86W25 1043 aa7.55□□□□□ -1.2
SSX2IP-208ENST00000490476 NPHS2Q9NP85 383 aa7.55□□□□□ -1.2
SSX2IP-208ENST00000490476 ABI2Q9NYB9 513 aaPredicted RBP7.55□□□□□ -1.2
SSX2IP-208ENST00000490476 MYO3AQ8NEV4 1616 aa7.55□□□□□ -1.2
SSX2IP-208ENST00000490476 SNRPBP14678 240 aaKnown RBP7.54□□□□□ -1.2
SSX2IP-208ENST00000490476 ZNF76P36508 570 aa7.54□□□□□ -1.2
SSX2IP-208ENST00000490476 C1QTNF8P60827 252 aa7.54□□□□□ -1.2
SSX2IP-208ENST00000490476 NFX1Q12986 1120 aaKnown RBP7.54□□□□□ -1.2
SSX2IP-208ENST00000490476 RNF34Q969K3 372 aa7.54□□□□□ -1.2
SSX2IP-208ENST00000490476 FRMD6Q96NE9 622 aa7.54□□□□□ -1.2
SSX2IP-208ENST00000490476 DENND4BO75064 1496 aaPredicted RBP7.54□□□□□ -1.2
SSX2IP-208ENST00000490476 RAPGEF2Q9Y4G8 1499 aa7.54□□□□□ -1.2
SSX2IP-208ENST00000490476 ABCA8O94911 1581 aa7.54□□□□□ -1.2
SSX2IP-208ENST00000490476 VWDEQ8N2E2 1590 aa7.54□□□□□ -1.2
SSX2IP-208ENST00000490476 CTSHP09668 335 aa7.53□□□□□ -1.2
SSX2IP-208ENST00000490476 CES1P23141 567 aa7.53□□□□□ -1.2
SSX2IP-208ENST00000490476 TARSP26639 723 aaKnown RBP7.53□□□□□ -1.2
SSX2IP-208ENST00000490476 RXRBP28702 533 aa7.53□□□□□ -1.2
SSX2IP-208ENST00000490476 ZC3H6P61129 1189 aaKnown RBP7.53□□□□□ -1.2
SSX2IP-208ENST00000490476 PTSQ03393 145 aa7.53□□□□□ -1.2
SSX2IP-208ENST00000490476 SAMD5Q5TGI4 173 aa7.53□□□□□ -1.2
SSX2IP-208ENST00000490476 ZNF772Q68DY9 489 aaPredicted RBP7.53□□□□□ -1.2
SSX2IP-208ENST00000490476 FIGNL1Q6PIW4 674 aa7.53□□□□□ -1.2
SSX2IP-208ENST00000490476 NT5DC4Q86YG4 428 aa7.53□□□□□ -1.2
SSX2IP-208ENST00000490476 OSBPL7Q9BZF2 842 aa7.53□□□□□ -1.2
SSX2IP-208ENST00000490476 NUCKS1Q9H1E3 243 aaKnown RBP7.53□□□□□ -1.2
SSX2IP-208ENST00000490476 CHRDQ9H2X0 955 aa7.53□□□□□ -1.2
SSX2IP-208ENST00000490476 KANSL3Q9P2N6 904 aa7.53□□□□□ -1.2
SSX2IP-208ENST00000490476 STRCP1A6NGW2 1772 aa7.53□□□□□ -1.2
SSX2IP-208ENST00000490476 RGS12O14924 1447 aa7.52□□□□□ -1.2
SSX2IP-208ENST00000490476 FHOD3Q2V2M9 1422 aa7.52□□□□□ -1.2
SSX2IP-208ENST00000490476 KDM5CP41229 1560 aa7.52□□□□□ -1.21
SSX2IP-208ENST00000490476 CYP2E1P05181 493 aaPredicted RBP7.52□□□□□ -1.21
SSX2IP-208ENST00000490476 FANCCQ00597 558 aa7.52□□□□□ -1.21
SSX2IP-208ENST00000490476 GRIN2CQ14957 1233 aa7.52□□□□□ -1.21
SSX2IP-208ENST00000490476 NAALADL2Q58DX5 795 aa7.52□□□□□ -1.21
SSX2IP-208ENST00000490476 NXPE4Q6UWF7 544 aa7.52□□□□□ -1.21
SSX2IP-208ENST00000490476 CRELD1Q96HD1 420 aa7.52□□□□□ -1.21
SSX2IP-208ENST00000490476 PNMA5Q96PV4 448 aa7.52□□□□□ -1.21
SSX2IP-208ENST00000490476 C12orf49Q9H741 205 aa7.52□□□□□ -1.21
SSX2IP-208ENST00000490476 PCDHGC4Q9Y5F7 938 aa7.52□□□□□ -1.21
SSX2IP-208ENST00000490476 MAGI2Q86UL8 1455 aa7.51□□□□□ -1.21
SSX2IP-208ENST00000490476 WIPF1O43516 503 aa7.51□□□□□ -1.21
SSX2IP-208ENST00000490476 EGFRP00533 1210 aa7.51□□□□□ -1.21
SSX2IP-208ENST00000490476 THBS1P07996 1170 aa7.51□□□□□ -1.21
SSX2IP-208ENST00000490476 RARAP10276 462 aa7.51□□□□□ -1.21
SSX2IP-208ENST00000490476 CCINQ13939 588 aa7.51□□□□□ -1.21
SSX2IP-208ENST00000490476 METTL16Q86W50 562 aaKnown RBP7.51□□□□□ -1.21
SSX2IP-208ENST00000490476 GALNT12Q8IXK2 581 aa7.51□□□□□ -1.21
SSX2IP-208ENST00000490476 BCO2Q9BYV7 579 aa7.51□□□□□ -1.21
SSX2IP-208ENST00000490476 STRN4Q9NRL3 753 aa7.51□□□□□ -1.21
SSX2IP-208ENST00000490476 PPP1R1BQ9UD71 204 aaPredicted RBP7.51□□□□□ -1.21
SSX2IP-208ENST00000490476 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.51□□□□□ -1.21
SSX2IP-208ENST00000490476 HECW1Q76N89 1606 aa7.51□□□□□ -1.21
SSX2IP-208ENST00000490476 CDK13Q14004 1512 aaKnown RBP7.51□□□□□ -1.21
SSX2IP-208ENST00000490476 ROBO1Q9Y6N7 1651 aa7.51□□□□□ -1.21
SSX2IP-208ENST00000490476 NEURL4Q96JN8 1562 aa7.5□□□□□ -1.21
SSX2IP-208ENST00000490476 CFAP74Q9C0B2 1584 aa7.5□□□□□ -1.21
SSX2IP-208ENST00000490476 CEP170BQ9Y4F5 1589 aaPredicted RBP7.5□□□□□ -1.21
SSX2IP-208ENST00000490476 TERTO14746 1132 aaKnown RBP7.5□□□□□ -1.21
SSX2IP-208ENST00000490476 FAM157BP0CG42 384 aa7.5□□□□□ -1.21
SSX2IP-208ENST00000490476 MAPTP10636 758 aaKnown RBP7.5□□□□□ -1.21
SSX2IP-208ENST00000490476 DBN1Q16643 649 aa7.5□□□□□ -1.21
SSX2IP-208ENST00000490476 RAB44Q7Z6P3 723 aaPredicted RBP7.5□□□□□ -1.21
SSX2IP-208ENST00000490476 CCDC155Q8N6L0 562 aa7.5□□□□□ -1.21
SSX2IP-208ENST00000490476 PMEPA1Q969W9 287 aa7.5□□□□□ -1.21
SSX2IP-208ENST00000490476 C8orf37Q96NL8 207 aa7.5□□□□□ -1.21
SSX2IP-208ENST00000490476 GSX2Q9BZM3 304 aa7.5□□□□□ -1.21
SSX2IP-208ENST00000490476 LATS2Q9NRM7 1088 aa7.5□□□□□ -1.21
SSX2IP-208ENST00000490476 METTL5Q9NRN9 209 aaKnown RBP7.5□□□□□ -1.21
SSX2IP-208ENST00000490476 CUEDC1Q9NWM3 386 aaPredicted RBP7.5□□□□□ -1.21
SSX2IP-208ENST00000490476 C9orf84Q5VXU9 1444 aa7.5□□□□□ -1.21
SSX2IP-208ENST00000490476 PHLPP1O60346 1717 aa7.49□□□□□ -1.21
SSX2IP-208ENST00000490476 SLC35F4A4IF30 521 aa7.49□□□□□ -1.21
SSX2IP-208ENST00000490476 PHF20L1A8MW92 1017 aa7.49□□□□□ -1.21
SSX2IP-208ENST00000490476 H7C1W4 665 aa7.49□□□□□ -1.21
SSX2IP-208ENST00000490476 GIPC1O14908 333 aa7.49□□□□□ -1.21
SSX2IP-208ENST00000490476 EFSO43281 561 aa7.49□□□□□ -1.21
SSX2IP-208ENST00000490476 MMP20O60882 483 aa7.49□□□□□ -1.21
SSX2IP-208ENST00000490476 USP17L7P0C7H9 530 aa7.49□□□□□ -1.21
SSX2IP-208ENST00000490476 NFKB1P19838 968 aa7.49□□□□□ -1.21
SSX2IP-208ENST00000490476 KCNQ4P56696 695 aa7.49□□□□□ -1.21
SSX2IP-208ENST00000490476 TNP2Q05952 138 aa7.49□□□□□ -1.21
SSX2IP-208ENST00000490476 RAD51AP2Q09MP3 1159 aa7.49□□□□□ -1.21
SSX2IP-208ENST00000490476 LBRQ14739 615 aaKnown RBP7.49□□□□□ -1.21
SSX2IP-208ENST00000490476 MEI1Q5TIA1 1274 aa7.49□□□□□ -1.21
SSX2IP-208ENST00000490476 ABHD17AQ96GS6 310 aa7.49□□□□□ -1.21
SSX2IP-208ENST00000490476 EHD4Q9H223 541 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms