RNA–Protein interactions for RNA: ENST00000490447.6

YIPF3-208, Transcript of Yip1 domain family member 3, humanhuman

TSL 2

Gene YIPF3, Length 1,321 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-208ENST00000490447 NCBP3Q53F19 620 aaKnown RBP22.71■■□□□ 1.23
YIPF3-208ENST00000490447 OGFOD1Q8N543 542 aa22.71■■□□□ 1.23
YIPF3-208ENST00000490447 GMLQ99445 158 aa22.71■■□□□ 1.23
YIPF3-208ENST00000490447 MPHOSPH8Q99549 860 aa22.71■■□□□ 1.23
YIPF3-208ENST00000490447 MYO3BQ8WXR4 1341 aa22.7■■□□□ 1.23
YIPF3-208ENST00000490447 ITGA6P23229 1130 aa22.7■■□□□ 1.22
YIPF3-208ENST00000490447 KIF23Q02241 960 aaPredicted RBP22.7■■□□□ 1.22
YIPF3-208ENST00000490447 DNAAF4Q8WXU2 420 aa22.7■■□□□ 1.22
YIPF3-208ENST00000490447 COA1Q9GZY4 146 aa22.7■■□□□ 1.22
YIPF3-208ENST00000490447 LEMD3Q9Y2U8 911 aa22.7■■□□□ 1.22
YIPF3-208ENST00000490447 MYH3P11055 1940 aa22.7■■□□□ 1.22
YIPF3-208ENST00000490447 FANCIQ9NVI1 1328 aa22.7■■□□□ 1.22
YIPF3-208ENST00000490447 WTIPA6NIX2 430 aaPredicted RBP22.69■■□□□ 1.22
YIPF3-208ENST00000490447 SLC10A3P09131 477 aa22.69■■□□□ 1.22
YIPF3-208ENST00000490447 FKBP1BP68106 108 aa22.69■■□□□ 1.22
YIPF3-208ENST00000490447 PLA2G12BQ9BX93 195 aa22.69■■□□□ 1.22
YIPF3-208ENST00000490447 MCOLN1Q9GZU1 580 aa22.69■■□□□ 1.22
YIPF3-208ENST00000490447 ANKRD2Q9GZV1 360 aa22.69■■□□□ 1.22
YIPF3-208ENST00000490447 SAGE1Q9NXZ1 904 aa22.69■■□□□ 1.22
YIPF3-208ENST00000490447 PSME4Q14997 1843 aa22.69■■□□□ 1.22
YIPF3-208ENST00000490447 ANP32CO43423 234 aa22.68■■□□□ 1.22
YIPF3-208ENST00000490447 KCNJ4P48050 445 aa22.68■■□□□ 1.22
YIPF3-208ENST00000490447 FAM161AQ3B820 660 aa22.68■■□□□ 1.22
YIPF3-208ENST00000490447 STRIP1Q5VSL9 837 aa22.68■■□□□ 1.22
YIPF3-208ENST00000490447 LINS1Q8NG48 757 aa22.68■■□□□ 1.22
YIPF3-208ENST00000490447 SALL2Q9Y467 1007 aaPredicted RBP22.68■■□□□ 1.22
YIPF3-208ENST00000490447 POLR2AP24928 1970 aaKnown RBP22.68■■□□□ 1.22
YIPF3-208ENST00000490447 SPEF2Q9C093 1822 aa22.68■■□□□ 1.22
YIPF3-208ENST00000490447 DGKZQ13574 1117 aa22.67■■□□□ 1.22
YIPF3-208ENST00000490447 DACT2Q5SW24 774 aa22.67■■□□□ 1.22
YIPF3-208ENST00000490447 ZNF804BA4D1E1 1349 aa22.67■■□□□ 1.22
YIPF3-208ENST00000490447 NBPF9Q3BBW0 867 aa22.65■■□□□ 1.22
YIPF3-208ENST00000490447 WDR63Q8IWG1 891 aa22.65■■□□□ 1.22
YIPF3-208ENST00000490447 REM2Q8IYK8 340 aaPredicted RBP22.65■■□□□ 1.22
YIPF3-208ENST00000490447 MXD3Q9BW11 206 aa22.65■■□□□ 1.22
YIPF3-208ENST00000490447 ANKRD18BA2A2Z9 1011 aa22.64■■□□□ 1.22
YIPF3-208ENST00000490447 TRPA1O75762 1119 aa22.64■■□□□ 1.22
YIPF3-208ENST00000490447 CSF1RP07333 972 aa22.64■■□□□ 1.22
YIPF3-208ENST00000490447 MMP14P50281 582 aa22.64■■□□□ 1.22
YIPF3-208ENST00000490447 TTLL5Q6EMB2 1281 aa22.64■■□□□ 1.22
YIPF3-208ENST00000490447 RNF186Q9NXI6 227 aa22.64■■□□□ 1.22
YIPF3-208ENST00000490447 HDAC9Q9UKV0 1011 aa22.64■■□□□ 1.22
YIPF3-208ENST00000490447 SCAF8Q9UPN6 1271 aaKnown RBP22.64■■□□□ 1.22
YIPF3-208ENST00000490447 PAPPA2Q9BXP8 1791 aa22.64■■□□□ 1.21
YIPF3-208ENST00000490447 NF2P35240 595 aa22.63■■□□□ 1.21
YIPF3-208ENST00000490447 CASP7P55210 303 aa22.63■■□□□ 1.21
YIPF3-208ENST00000490447 TTLL12Q14166 644 aaPredicted RBP22.63■■□□□ 1.21
YIPF3-208ENST00000490447 TXNRD3Q86VQ6 643 aa22.63■■□□□ 1.21
YIPF3-208ENST00000490447 RASAL3Q86YV0 1011 aa22.63■■□□□ 1.21
YIPF3-208ENST00000490447 WNT10BO00744 389 aa22.62■■□□□ 1.21
YIPF3-208ENST00000490447 VAMP4O75379 141 aa22.62■■□□□ 1.21
YIPF3-208ENST00000490447 EXOSC9Q06265 439 aaKnown RBP22.62■■□□□ 1.21
YIPF3-208ENST00000490447 CHRNDQ07001 517 aa22.62■■□□□ 1.21
YIPF3-208ENST00000490447 CSRNP1Q96S65 589 aa22.62■■□□□ 1.21
YIPF3-208ENST00000490447 CHMP3Q9Y3E7 222 aa22.62■■□□□ 1.21
YIPF3-208ENST00000490447 CASP8AP2Q9UKL3 1982 aa22.62■■□□□ 1.21
YIPF3-208ENST00000490447 MLLT1Q03111 559 aaPredicted RBP22.61■■□□□ 1.21
YIPF3-208ENST00000490447 SASH1O94885 1247 aa22.6■■□□□ 1.21
YIPF3-208ENST00000490447 KLRK1P26718 216 aa22.6■■□□□ 1.21
YIPF3-208ENST00000490447 GTF2IP78347 998 aa22.6■■□□□ 1.21
YIPF3-208ENST00000490447 IFIT5Q13325 482 aaKnown RBP22.6■■□□□ 1.21
YIPF3-208ENST00000490447 KIAA0825Q8IV33 1275 aa22.6■■□□□ 1.21
YIPF3-208ENST00000490447 PRAMEF18Q5VWM3 479 aa22.59■■□□□ 1.21
YIPF3-208ENST00000490447 MOB2Q70IA6 237 aa22.59■■□□□ 1.21
YIPF3-208ENST00000490447 ZEB1P37275 1124 aaPredicted RBP22.58■■□□□ 1.21
YIPF3-208ENST00000490447 APOBEC3FQ8IUX4 373 aaKnown RBP22.58■■□□□ 1.21
YIPF3-208ENST00000490447 F6X3S4 739 aa22.57■■□□□ 1.2
YIPF3-208ENST00000490447 UBE2Q2LH0YL09 131 aa22.57■■□□□ 1.2
YIPF3-208ENST00000490447 TAF7LQ5H9L4 462 aa22.57■■□□□ 1.2
YIPF3-208ENST00000490447 CD209Q9NNX6 404 aa22.57■■□□□ 1.2
YIPF3-208ENST00000490447 TAF5LO75529 589 aa22.57■■□□□ 1.2
YIPF3-208ENST00000490447 RGS19P49795 217 aa22.57■■□□□ 1.2
YIPF3-208ENST00000490447 BEND3Q5T5X7 828 aa22.57■■□□□ 1.2
YIPF3-208ENST00000490447 ZNF804AQ7Z570 1209 aa22.57■■□□□ 1.2
YIPF3-208ENST00000490447 CACNA1FO60840 1977 aa22.56■■□□□ 1.2
YIPF3-208ENST00000490447 FOXO4P98177 505 aa22.56■■□□□ 1.2
YIPF3-208ENST00000490447 CCDC57Q2TAC2 916 aa22.56■■□□□ 1.2
YIPF3-208ENST00000490447 HELBQ8NG08 1087 aaPredicted RBP22.56■■□□□ 1.2
YIPF3-208ENST00000490447 AKAP11Q9UKA4 1901 aa22.55■■□□□ 1.2
YIPF3-208ENST00000490447 ZNF646O15015 1829 aaPredicted RBP22.55■■□□□ 1.2
YIPF3-208ENST00000490447 LMBR1LQ6UX01 489 aa22.55■■□□□ 1.2
YIPF3-208ENST00000490447 ARMC9Q7Z3E5 817 aa22.55■■□□□ 1.2
YIPF3-208ENST00000490447 C9orf78Q9NZ63 289 aaPredicted RBP22.55■■□□□ 1.2
YIPF3-208ENST00000490447 ZNF316A6NFI3 1004 aaPredicted RBP22.54■■□□□ 1.2
YIPF3-208ENST00000490447 SNAP23O00161 211 aa22.54■■□□□ 1.2
YIPF3-208ENST00000490447 GRM8O00222 908 aa22.54■■□□□ 1.2
YIPF3-208ENST00000490447 DLGAP5Q15398 846 aa22.54■■□□□ 1.2
YIPF3-208ENST00000490447 C15orf52Q6ZUT6 534 aaKnown RBP22.54■■□□□ 1.2
YIPF3-208ENST00000490447 PRKG1Q13976 671 aa22.53■■□□□ 1.2
YIPF3-208ENST00000490447 LDHAL6AQ6ZMR3 332 aa22.53■■□□□ 1.2
YIPF3-208ENST00000490447 CTU1Q7Z7A3 348 aaKnown RBP22.53■■□□□ 1.2
YIPF3-208ENST00000490447 FAM9BQ8IZU0 186 aa22.53■■□□□ 1.2
YIPF3-208ENST00000490447 SPINK5Q9NQ38 1064 aaPredicted RBP22.53■■□□□ 1.2
YIPF3-208ENST00000490447 CNNM1Q9NRU3 951 aa22.53■■□□□ 1.2
YIPF3-208ENST00000490447 MYO1BO43795 1136 aa22.52■■□□□ 1.2
YIPF3-208ENST00000490447 SREBF2Q12772 1141 aa22.52■■□□□ 1.2
YIPF3-208ENST00000490447 SLC4A10Q6U841 1118 aa22.52■■□□□ 1.2
YIPF3-208ENST00000490447 COL1A1P02452 1464 aaPredicted RBP22.52■■□□□ 1.2
YIPF3-208ENST00000490447 F8W031 263 aaPredicted RBP22.51■■□□□ 1.19
YIPF3-208ENST00000490447 PLIN1O60240 522 aa22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms