RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 USTQ9Y2C2 406 aa5.56□□□□□ -1.52
SNRNP40-206ENST00000489853 CDK13Q14004 1512 aaKnown RBP5.55□□□□□ -1.52
SNRNP40-206ENST00000489853 GOLGA8CPA6NN73 597 aa5.55□□□□□ -1.52
SNRNP40-206ENST00000489853 C21orf2O43822 256 aa5.55□□□□□ -1.52
SNRNP40-206ENST00000489853 F13A1P00488 732 aa5.55□□□□□ -1.52
SNRNP40-206ENST00000489853 GJA5P36382 358 aa5.55□□□□□ -1.52
SNRNP40-206ENST00000489853 SSR1P43307 286 aaKnown RBP5.55□□□□□ -1.52
SNRNP40-206ENST00000489853 KCNJ6P48051 423 aa5.55□□□□□ -1.52
SNRNP40-206ENST00000489853 EIF5P55010 431 aaKnown RBP5.55□□□□□ -1.52
SNRNP40-206ENST00000489853 GSDMDP57764 484 aa5.55□□□□□ -1.52
SNRNP40-206ENST00000489853 FOXD4L6Q3SYB3 417 aaPredicted RBP5.55□□□□□ -1.52
SNRNP40-206ENST00000489853 IFFO2Q5TF58 517 aa5.55□□□□□ -1.52
SNRNP40-206ENST00000489853 PRPF38BQ5VTL8 546 aaKnown RBP5.55□□□□□ -1.52
SNRNP40-206ENST00000489853 JAKMIP3Q5VZ66 844 aa5.55□□□□□ -1.52
SNRNP40-206ENST00000489853 CC2D1AQ6P1N0 951 aaPredicted RBP5.55□□□□□ -1.52
SNRNP40-206ENST00000489853 FOXD4L3Q6VB84 417 aaPredicted RBP5.55□□□□□ -1.52
SNRNP40-206ENST00000489853 GPR161Q8N6U8 529 aaKnown RBP5.55□□□□□ -1.52
SNRNP40-206ENST00000489853 JMYQ8N9B5 988 aa5.55□□□□□ -1.52
SNRNP40-206ENST00000489853 TSR2Q969E8 191 aaKnown RBP5.55□□□□□ -1.52
SNRNP40-206ENST00000489853 PLCD4Q9BRC7 762 aa5.55□□□□□ -1.52
SNRNP40-206ENST00000489853 CARD14Q9BXL6 1004 aa5.55□□□□□ -1.52
SNRNP40-206ENST00000489853 NUP62CLQ9H1M0 184 aa5.55□□□□□ -1.52
SNRNP40-206ENST00000489853 A1CFQ9NQ94 594 aaKnown RBP5.55□□□□□ -1.52
SNRNP40-206ENST00000489853 SH3BP1Q9Y3L3 701 aa5.55□□□□□ -1.52
SNRNP40-206ENST00000489853 MED14O60244 1454 aa5.55□□□□□ -1.52
SNRNP40-206ENST00000489853 MYOM2P54296 1465 aa5.55□□□□□ -1.52
SNRNP40-206ENST00000489853 PIK3R4Q99570 1358 aa5.55□□□□□ -1.52
SNRNP40-206ENST00000489853 CCDC69A6NI79 296 aa5.54□□□□□ -1.52
SNRNP40-206ENST00000489853 CCP110O43303 1012 aa5.54□□□□□ -1.52
SNRNP40-206ENST00000489853 EPB41L2O43491 1005 aaKnown RBP5.54□□□□□ -1.52
SNRNP40-206ENST00000489853 STX6O43752 255 aa5.54□□□□□ -1.52
SNRNP40-206ENST00000489853 TADA3O75528 432 aa5.54□□□□□ -1.52
SNRNP40-206ENST00000489853 SASH3O75995 380 aa5.54□□□□□ -1.52
SNRNP40-206ENST00000489853 SMC2O95347 1197 aa5.54□□□□□ -1.52
SNRNP40-206ENST00000489853 ERCC3P19447 782 aa5.54□□□□□ -1.52
SNRNP40-206ENST00000489853 GCGRP47871 477 aa5.54□□□□□ -1.52
SNRNP40-206ENST00000489853 CCZ1BP86790 482 aa5.54□□□□□ -1.52
SNRNP40-206ENST00000489853 CCZ1P86791 482 aaPredicted RBP5.54□□□□□ -1.52
SNRNP40-206ENST00000489853 ZKSCAN8Q15776 578 aaPredicted RBP5.54□□□□□ -1.52
SNRNP40-206ENST00000489853 NBPF9Q3BBW0 867 aa5.54□□□□□ -1.52
SNRNP40-206ENST00000489853 ANO6Q4KMQ2 910 aa5.54□□□□□ -1.52
SNRNP40-206ENST00000489853 NBPF10Q6P3W6 841 aaKnown RBP5.54□□□□□ -1.52
SNRNP40-206ENST00000489853 RBM43Q6ZSC3 357 aaKnown RBP5.54□□□□□ -1.52
SNRNP40-206ENST00000489853 FAM43BQ6ZT52 329 aaPredicted RBP5.54□□□□□ -1.52
SNRNP40-206ENST00000489853 TADA2BQ86TJ2 420 aa5.54□□□□□ -1.52
SNRNP40-206ENST00000489853 MORC1Q86VD1 984 aa5.54□□□□□ -1.52
SNRNP40-206ENST00000489853 ERC1Q8IUD2 1116 aa5.54□□□□□ -1.52
SNRNP40-206ENST00000489853 UTP14AQ9BVJ6 771 aaKnown RBP5.54□□□□□ -1.52
SNRNP40-206ENST00000489853 ARFGAP3Q9NP61 516 aa5.54□□□□□ -1.52
SNRNP40-206ENST00000489853 TRMT1Q9NXH9 659 aaKnown RBP5.54□□□□□ -1.52
SNRNP40-206ENST00000489853 RGS12O14924 1447 aa5.54□□□□□ -1.52
SNRNP40-206ENST00000489853 TCHHQ07283 1943 aa5.54□□□□□ -1.52
SNRNP40-206ENST00000489853 IQGAP2Q13576 1575 aa5.54□□□□□ -1.52
SNRNP40-206ENST00000489853 KLHL33A6NCF5 533 aa5.54□□□□□ -1.52
SNRNP40-206ENST00000489853 NBPF26B4DH59 902 aa5.54□□□□□ -1.52
SNRNP40-206ENST00000489853 MAP2K7O14733 419 aa5.54□□□□□ -1.52
SNRNP40-206ENST00000489853 SEC31AO94979 1220 aaKnown RBP5.54□□□□□ -1.52
SNRNP40-206ENST00000489853 LIG1P18858 919 aa5.54□□□□□ -1.52
SNRNP40-206ENST00000489853 ZNF165P49910 485 aa5.54□□□□□ -1.52
SNRNP40-206ENST00000489853 MNAT1P51948 309 aa5.54□□□□□ -1.52
SNRNP40-206ENST00000489853 NR6A1Q15406 480 aa5.54□□□□□ -1.52
SNRNP40-206ENST00000489853 WASHC4Q2M389 1173 aa5.54□□□□□ -1.52
SNRNP40-206ENST00000489853 LRRFIP1Q32MZ4 808 aaKnown RBP5.54□□□□□ -1.52
SNRNP40-206ENST00000489853 NBPF11Q86T75 865 aa5.54□□□□□ -1.52
SNRNP40-206ENST00000489853 FUT8Q9BYC5 575 aa5.54□□□□□ -1.52
SNRNP40-206ENST00000489853 VRTNQ9H8Y1 702 aa5.54□□□□□ -1.52
SNRNP40-206ENST00000489853 PTPRMP28827 1452 aa5.54□□□□□ -1.52
SNRNP40-206ENST00000489853 ADAMTSL3P82987 1691 aa5.54□□□□□ -1.52
SNRNP40-206ENST00000489853 KIF24Q5T7B8 1368 aa5.53□□□□□ -1.52
SNRNP40-206ENST00000489853 PHLPP2Q6ZVD8 1323 aa5.53□□□□□ -1.52
SNRNP40-206ENST00000489853 LMTK3Q96Q04 1460 aa5.53□□□□□ -1.52
SNRNP40-206ENST00000489853 SHANK2Q9UPX8 1470 aa5.53□□□□□ -1.52
SNRNP40-206ENST00000489853 PPP1R3GB7ZBB8 358 aa5.53□□□□□ -1.52
SNRNP40-206ENST00000489853 PIK3CDO00329 1044 aa5.53□□□□□ -1.52
SNRNP40-206ENST00000489853 FIBPO43427 364 aa5.53□□□□□ -1.52
SNRNP40-206ENST00000489853 PPFIA4O75335 1185 aa5.53□□□□□ -1.52
SNRNP40-206ENST00000489853 TSPY4P0CV99 314 aa5.53□□□□□ -1.52
SNRNP40-206ENST00000489853 TSPY10P0CW01 314 aa5.53□□□□□ -1.52
SNRNP40-206ENST00000489853 SYT1P21579 422 aa5.53□□□□□ -1.52
SNRNP40-206ENST00000489853 ETF1P62495 437 aaKnown RBP5.53□□□□□ -1.52
SNRNP40-206ENST00000489853 PPP2R5AQ15172 486 aa5.53□□□□□ -1.52
SNRNP40-206ENST00000489853 MAP9Q49MG5 647 aa5.53□□□□□ -1.52
SNRNP40-206ENST00000489853 NBPF3Q9H094 633 aa5.53□□□□□ -1.52
SNRNP40-206ENST00000489853 TNMDQ9H2S6 317 aa5.53□□□□□ -1.52
SNRNP40-206ENST00000489853 PDRG1Q9NUG6 133 aa5.53□□□□□ -1.52
SNRNP40-206ENST00000489853 DDX19AQ9NUU7 478 aaKnown RBP5.53□□□□□ -1.52
SNRNP40-206ENST00000489853 IMPACTQ9P2X3 320 aa5.53□□□□□ -1.52
SNRNP40-206ENST00000489853 MAFBQ9Y5Q3 323 aaPredicted RBP5.53□□□□□ -1.52
SNRNP40-206ENST00000489853 CD109Q6YHK3 1445 aa5.53□□□□□ -1.52
SNRNP40-206ENST00000489853 TTC41PQ6P2S7 1318 aa5.53□□□□□ -1.52
SNRNP40-206ENST00000489853 CROCC2H7BZ55 1655 aa5.53□□□□□ -1.52
SNRNP40-206ENST00000489853 SHPRHQ149N8 1683 aa5.53□□□□□ -1.52
SNRNP40-206ENST00000489853 PLA2R1Q13018 1463 aa5.52□□□□□ -1.52
SNRNP40-206ENST00000489853 A0A0G2JS52 829 aa5.52□□□□□ -1.53
SNRNP40-206ENST00000489853 H0YHG0 523 aa5.52□□□□□ -1.53
SNRNP40-206ENST00000489853 GOLGA6L19H0YKK7 550 aa5.52□□□□□ -1.53
SNRNP40-206ENST00000489853 C6orf229H3BNL8 230 aa5.52□□□□□ -1.53
SNRNP40-206ENST00000489853 SRGAP3O43295 1099 aa5.52□□□□□ -1.53
SNRNP40-206ENST00000489853 RAPGEF3O95398 923 aa5.52□□□□□ -1.53
SNRNP40-206ENST00000489853 HNRNPH1P31943 449 aaKnown RBP5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms