RNA–Protein interactions for RNA: ENST00000489500.1

TNRC6B-208, Transcript of trinucleotide repeat containing 6B, humanhuman

TSL 2

Gene TNRC6B, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6B-208ENST00000489500 FSHRP23945 695 aa11.85□□□□□ -0.51
TNRC6B-208ENST00000489500 RFC4P35249 363 aa11.85□□□□□ -0.51
TNRC6B-208ENST00000489500 NR6A1Q15406 480 aa11.85□□□□□ -0.51
TNRC6B-208ENST00000489500 VASH1Q7L8A9 365 aaPredicted RBP11.85□□□□□ -0.51
TNRC6B-208ENST00000489500 MAP4K5Q9Y4K4 846 aa11.85□□□□□ -0.51
TNRC6B-208ENST00000489500 ITPK1Q13572 414 aa11.84□□□□□ -0.51
TNRC6B-208ENST00000489500 ERFEQ4G0M1 354 aa11.84□□□□□ -0.51
TNRC6B-208ENST00000489500 AEBP1Q8IUX7 1158 aa11.84□□□□□ -0.51
TNRC6B-208ENST00000489500 NFATC2IPQ8NCF5 419 aa11.84□□□□□ -0.51
TNRC6B-208ENST00000489500 GPKOWQ92917 476 aaPredicted RBP eCLIP11.84□□□□□ -0.51
TNRC6B-208ENST00000489500 CNTNAP4Q9C0A0 1308 aa11.84□□□□□ -0.51
TNRC6B-208ENST00000489500 COL5A3P25940 1745 aaPredicted RBP11.83□□□□□ -0.52
TNRC6B-208ENST00000489500 PTCD1O75127 700 aaKnown RBP11.83□□□□□ -0.52
TNRC6B-208ENST00000489500 AP1G2O75843 785 aa11.83□□□□□ -0.52
TNRC6B-208ENST00000489500 C6orf118Q5T5N4 469 aa11.83□□□□□ -0.52
TNRC6B-208ENST00000489500 ZNF784Q8NCA9 323 aaPredicted RBP11.83□□□□□ -0.52
TNRC6B-208ENST00000489500 NLGN2Q8NFZ4 835 aa11.83□□□□□ -0.52
TNRC6B-208ENST00000489500 FKBPLQ9UIM3 349 aa11.83□□□□□ -0.52
TNRC6B-208ENST00000489500 NUDCQ9Y266 331 aa11.83□□□□□ -0.52
TNRC6B-208ENST00000489500 U2SURPO15042 1029 aaKnown RBP11.82□□□□□ -0.52
TNRC6B-208ENST00000489500 RPS6KA4O75676 772 aa11.82□□□□□ -0.52
TNRC6B-208ENST00000489500 HMOX1P09601 288 aa11.82□□□□□ -0.52
TNRC6B-208ENST00000489500 CNGB1Q14028 1251 aaPredicted RBP11.82□□□□□ -0.52
TNRC6B-208ENST00000489500 KDM6AO15550 1401 aaPredicted RBP11.81□□□□□ -0.52
TNRC6B-208ENST00000489500 PDXDC2PQ6P474 469 aa11.81□□□□□ -0.52
TNRC6B-208ENST00000489500 TTC5Q8N0Z6 440 aa11.81□□□□□ -0.52
TNRC6B-208ENST00000489500 GAS2L2Q8NHY3 880 aa11.81□□□□□ -0.52
TNRC6B-208ENST00000489500 EPS8L1Q8TE68 723 aa11.81□□□□□ -0.52
TNRC6B-208ENST00000489500 SLC52A2Q9HAB3 445 aa11.81□□□□□ -0.52
TNRC6B-208ENST00000489500 CCDC87Q9NVE4 849 aa11.81□□□□□ -0.52
TNRC6B-208ENST00000489500 PARP3Q9Y6F1 533 aa11.81□□□□□ -0.52
TNRC6B-208ENST00000489500 RNMTO43148 476 aaKnown RBP11.8□□□□□ -0.52
TNRC6B-208ENST00000489500 NEFMP07197 916 aa11.8□□□□□ -0.52
TNRC6B-208ENST00000489500 MMP10P09238 476 aa11.8□□□□□ -0.52
TNRC6B-208ENST00000489500 ARHGAP9Q9BRR9 750 aa11.8□□□□□ -0.52
TNRC6B-208ENST00000489500 CRKLP46109 303 aaKnown RBP11.79□□□□□ -0.52
TNRC6B-208ENST00000489500 TGFB2P61812 414 aa11.79□□□□□ -0.52
TNRC6B-208ENST00000489500 TEFQ10587 303 aa11.79□□□□□ -0.52
TNRC6B-208ENST00000489500 NPM2Q86SE8 214 aaKnown RBP11.79□□□□□ -0.52
TNRC6B-208ENST00000489500 MEIOBQ8N635 442 aa11.79□□□□□ -0.52
TNRC6B-208ENST00000489500 OCSTAMPQ9BR26 566 aa11.79□□□□□ -0.52
TNRC6B-208ENST00000489500 MYH14Q7Z406 1995 aaKnown RBP11.79□□□□□ -0.52
TNRC6B-208ENST00000489500 GNAT3A8MTJ3 354 aa11.78□□□□□ -0.52
TNRC6B-208ENST00000489500 H3BM21 787 aa11.78□□□□□ -0.52
TNRC6B-208ENST00000489500 GIGYF1O75420 1035 aaPredicted RBP11.78□□□□□ -0.52
TNRC6B-208ENST00000489500 NPAS3Q8IXF0 933 aa11.78□□□□□ -0.52
TNRC6B-208ENST00000489500 CCDC116Q8IYX3 515 aa11.78□□□□□ -0.52
TNRC6B-208ENST00000489500 HMX1Q9NP08 348 aaPredicted RBP11.78□□□□□ -0.52
TNRC6B-208ENST00000489500 KIF13BQ9NQT8 1826 aa11.77□□□□□ -0.52
TNRC6B-208ENST00000489500 STARD3NLO95772 234 aa11.77□□□□□ -0.53
TNRC6B-208ENST00000489500 YBX3P16989 372 aaKnown RBP eCLIP11.77□□□□□ -0.53
TNRC6B-208ENST00000489500 GMPRP36959 345 aa11.77□□□□□ -0.53
TNRC6B-208ENST00000489500 MTHFSDQ2M296 383 aaKnown RBP11.77□□□□□ -0.53
TNRC6B-208ENST00000489500 LINC00528Q8N1L1 170 aa11.77□□□□□ -0.53
TNRC6B-208ENST00000489500 TEX13AQ9BXU3 409 aaPredicted RBP11.77□□□□□ -0.53
TNRC6B-208ENST00000489500 CICQ96RK0 1608 aaPredicted RBP11.77□□□□□ -0.53
TNRC6B-208ENST00000489500 ERBB4Q15303 1308 aa11.77□□□□□ -0.53
TNRC6B-208ENST00000489500 BMP2P12643 396 aa11.76□□□□□ -0.53
TNRC6B-208ENST00000489500 GYS1P13807 737 aa11.76□□□□□ -0.53
TNRC6B-208ENST00000489500 INSM1Q01101 510 aaPredicted RBP11.76□□□□□ -0.53
TNRC6B-208ENST00000489500 SMIM5Q71RC9 77 aa11.76□□□□□ -0.53
TNRC6B-208ENST00000489500 AMIGO3Q86WK7 504 aa11.76□□□□□ -0.53
TNRC6B-208ENST00000489500 RTF1Q92541 710 aaKnown RBP11.76□□□□□ -0.53
TNRC6B-208ENST00000489500 SLC4A9Q96Q91 983 aa11.76□□□□□ -0.53
TNRC6B-208ENST00000489500 LGR6Q9HBX8 967 aa11.76□□□□□ -0.53
TNRC6B-208ENST00000489500 C4AP0C0L4 1744 aa11.76□□□□□ -0.53
TNRC6B-208ENST00000489500 TJP1Q07157 1748 aa11.76□□□□□ -0.53
TNRC6B-208ENST00000489500 A0A087WZG4 1122 aa11.75□□□□□ -0.53
TNRC6B-208ENST00000489500 USP17L8P0C7I0 530 aa11.75□□□□□ -0.53
TNRC6B-208ENST00000489500 PPP1R26Q5T8A7 1209 aaPredicted RBP11.75□□□□□ -0.53
TNRC6B-208ENST00000489500 ZBTB33Q86T24 672 aa11.75□□□□□ -0.53
TNRC6B-208ENST00000489500 IRF7Q92985 503 aa11.75□□□□□ -0.53
TNRC6B-208ENST00000489500 MRC1P22897 1456 aa11.75□□□□□ -0.53
TNRC6B-208ENST00000489500 N4BP2Q86UW6 1770 aaPredicted RBP11.74□□□□□ -0.53
TNRC6B-208ENST00000489500 U2AF1L5P0DN76 240 aaPredicted RBP11.74□□□□□ -0.53
TNRC6B-208ENST00000489500 RFC5P40937 340 aa11.74□□□□□ -0.53
TNRC6B-208ENST00000489500 U2AF1Q01081 240 aaKnown RBP eCLIP11.74□□□□□ -0.53
TNRC6B-208ENST00000489500 DNAJC10Q8IXB1 793 aa11.74□□□□□ -0.53
TNRC6B-208ENST00000489500 KCTD15Q96SI1 283 aaPredicted RBP11.74□□□□□ -0.53
TNRC6B-208ENST00000489500 PNNQ9H307 717 aaKnown RBP11.74□□□□□ -0.53
TNRC6B-208ENST00000489500 USP42Q9H9J4 1324 aaKnown RBP11.74□□□□□ -0.53
TNRC6B-208ENST00000489500 MAN1A2O60476 641 aa11.73□□□□□ -0.53
TNRC6B-208ENST00000489500 UPP2O95045 317 aa11.73□□□□□ -0.53
TNRC6B-208ENST00000489500 CYP19A1P11511 503 aaPredicted RBP11.73□□□□□ -0.53
TNRC6B-208ENST00000489500 C1QTNF8P60827 252 aa11.73□□□□□ -0.53
TNRC6B-208ENST00000489500 CBLBQ13191 982 aa11.73□□□□□ -0.53
TNRC6B-208ENST00000489500 SLC39A6Q13433 755 aa11.73□□□□□ -0.53
TNRC6B-208ENST00000489500 INTS5Q6P9B9 1019 aaKnown RBP11.73□□□□□ -0.53
TNRC6B-208ENST00000489500 SLC10A4Q96EP9 437 aa11.73□□□□□ -0.53
TNRC6B-208ENST00000489500 ADAMTS7Q9UKP4 1686 aa11.73□□□□□ -0.53
TNRC6B-208ENST00000489500 ZC3H4Q9UPT8 1303 aaKnown RBP11.73□□□□□ -0.53
TNRC6B-208ENST00000489500 BCS1LQ9Y276 419 aa11.73□□□□□ -0.53
TNRC6B-208ENST00000489500 PRKAR2BP31323 418 aa11.72□□□□□ -0.53
TNRC6B-208ENST00000489500 ADAM32Q8TC27 787 aa11.72□□□□□ -0.53
TNRC6B-208ENST00000489500 FMNL2Q96PY5 1086 aa11.72□□□□□ -0.53
TNRC6B-208ENST00000489500 PIM2Q9P1W9 311 aa11.72□□□□□ -0.53
TNRC6B-208ENST00000489500 STK17AQ9UEE5 414 aa11.72□□□□□ -0.53
TNRC6B-208ENST00000489500 UBR2Q8IWV8 1755 aa11.72□□□□□ -0.53
TNRC6B-208ENST00000489500 COL3A1P02461 1466 aaPredicted RBP11.71□□□□□ -0.53
TNRC6B-208ENST00000489500 C10orf71Q711Q0 1435 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms