RNA–Protein interactions for RNA: ENST00000489434.3

SFXN3-207, Transcript of sideroflexin 3, humanhuman

TSL 3

Gene SFXN3, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-207ENST00000489434 TSR2Q969E8 191 aaKnown RBP15.27■□□□□ 0.04
SFXN3-207ENST00000489434 FBXW7Q969H0 707 aa15.27■□□□□ 0.04
SFXN3-207ENST00000489434 MINPP1Q9UNW1 487 aa15.27■□□□□ 0.04
SFXN3-207ENST00000489434 NEURL1BA8MQ27 555 aa15.26■□□□□ 0.03
SFXN3-207ENST00000489434 SLC4A2P04920 1241 aa15.26■□□□□ 0.03
SFXN3-207ENST00000489434 MMP14P50281 582 aa15.26■□□□□ 0.03
SFXN3-207ENST00000489434 CCT4P50991 539 aaKnown RBP15.26■□□□□ 0.03
SFXN3-207ENST00000489434 CCDC27Q2M243 656 aa15.26■□□□□ 0.03
SFXN3-207ENST00000489434 CWF19L2Q2TBE0 894 aaKnown RBP15.26■□□□□ 0.03
SFXN3-207ENST00000489434 TWISTNBQ3B726 338 aaPredicted RBP15.26■□□□□ 0.03
SFXN3-207ENST00000489434 ANKRD2Q9GZV1 360 aa15.26■□□□□ 0.03
SFXN3-207ENST00000489434 RNF186Q9NXI6 227 aa15.26■□□□□ 0.03
SFXN3-207ENST00000489434 LEMD3Q9Y2U8 911 aa15.26■□□□□ 0.03
SFXN3-207ENST00000489434 SPEF2Q9C093 1822 aa15.25■□□□□ 0.03
SFXN3-207ENST00000489434 NF2P35240 595 aa15.25■□□□□ 0.03
SFXN3-207ENST00000489434 TTLL12Q14166 644 aaPredicted RBP15.25■□□□□ 0.03
SFXN3-207ENST00000489434 STRIP1Q5VSL9 837 aa15.25■□□□□ 0.03
SFXN3-207ENST00000489434 CSRNP1Q96S65 589 aa15.25■□□□□ 0.03
SFXN3-207ENST00000489434 MPHOSPH8Q99549 860 aa15.25■□□□□ 0.03
SFXN3-207ENST00000489434 COA1Q9GZY4 146 aa15.25■□□□□ 0.03
SFXN3-207ENST00000489434 MYH16Q9H6N6 1097 aa15.25■□□□□ 0.03
SFXN3-207ENST00000489434 PAPPA2Q9BXP8 1791 aa15.25■□□□□ 0.03
SFXN3-207ENST00000489434 H7C1W4 665 aa15.24■□□□□ 0.03
SFXN3-207ENST00000489434 KCNJ4P48050 445 aa15.24■□□□□ 0.03
SFXN3-207ENST00000489434 WWC1Q8IX03 1113 aa15.24■□□□□ 0.03
SFXN3-207ENST00000489434 PDE4DIPQ5VU43 2346 aa15.23■□□□□ 0.03
SFXN3-207ENST00000489434 IL16Q14005 1332 aa15.23■□□□□ 0.03
SFXN3-207ENST00000489434 FKBP5Q13451 457 aaPredicted RBP15.23■□□□□ 0.03
SFXN3-207ENST00000489434 DACT2Q5SW24 774 aa15.23■□□□□ 0.03
SFXN3-207ENST00000489434 RASAL3Q86YV0 1011 aa15.23■□□□□ 0.03
SFXN3-207ENST00000489434 HDAC9Q9UKV0 1011 aa15.23■□□□□ 0.03
SFXN3-207ENST00000489434 CACNA1FO60840 1977 aa15.23■□□□□ 0.03
SFXN3-207ENST00000489434 ZNF804BA4D1E1 1349 aa15.22■□□□□ 0.03
SFXN3-207ENST00000489434 WTIPA6NIX2 430 aaPredicted RBP15.22■□□□□ 0.03
SFXN3-207ENST00000489434 ITGA6P23229 1130 aa15.22■□□□□ 0.03
SFXN3-207ENST00000489434 FLIIQ13045 1269 aa15.22■□□□□ 0.03
SFXN3-207ENST00000489434 GCKRQ14397 625 aa15.22■□□□□ 0.03
SFXN3-207ENST00000489434 NBPF9Q3BBW0 867 aa15.22■□□□□ 0.03
SFXN3-207ENST00000489434 TTLL5Q6EMB2 1281 aa15.22■□□□□ 0.03
SFXN3-207ENST00000489434 PLA2G12BQ9BX93 195 aa15.22■□□□□ 0.03
SFXN3-207ENST00000489434 UBE2Q2LH0YL09 131 aa15.21■□□□□ 0.03
SFXN3-207ENST00000489434 WNT10BO00744 389 aa15.21■□□□□ 0.03
SFXN3-207ENST00000489434 G2E3Q7L622 706 aa15.21■□□□□ 0.03
SFXN3-207ENST00000489434 APOBEC3FQ8IUX4 373 aaKnown RBP15.21■□□□□ 0.03
SFXN3-207ENST00000489434 LINS1Q8NG48 757 aa15.21■□□□□ 0.03
SFXN3-207ENST00000489434 DNAAF4Q8WXU2 420 aa15.21■□□□□ 0.03
SFXN3-207ENST00000489434 NCBP3Q53F19 620 aaKnown RBP15.2■□□□□ 0.02
SFXN3-207ENST00000489434 CTU1Q7Z7A3 348 aaKnown RBP15.2■□□□□ 0.02
SFXN3-207ENST00000489434 MXD3Q9BW11 206 aa15.2■□□□□ 0.02
SFXN3-207ENST00000489434 ANKRD18BA2A2Z9 1011 aa15.19■□□□□ 0.02
SFXN3-207ENST00000489434 SASH1O94885 1247 aa15.19■□□□□ 0.02
SFXN3-207ENST00000489434 PRAMEF18Q5VWM3 479 aa15.19■□□□□ 0.02
SFXN3-207ENST00000489434 MOB2Q70IA6 237 aa15.19■□□□□ 0.02
SFXN3-207ENST00000489434 ARMC9Q7Z3E5 817 aa15.19■□□□□ 0.02
SFXN3-207ENST00000489434 TXNRD3Q86VQ6 643 aa15.19■□□□□ 0.02
SFXN3-207ENST00000489434 KIAA0825Q8IV33 1275 aa15.19■□□□□ 0.02
SFXN3-207ENST00000489434 SCAF8Q9UPN6 1271 aaKnown RBP15.19■□□□□ 0.02
SFXN3-207ENST00000489434 CSF1RP07333 972 aa15.18■□□□□ 0.02
SFXN3-207ENST00000489434 GTF2IP78347 998 aa15.18■□□□□ 0.02
SFXN3-207ENST00000489434 SREBF2Q12772 1141 aa15.18■□□□□ 0.02
SFXN3-207ENST00000489434 IFIT5Q13325 482 aaKnown RBP15.18■□□□□ 0.02
SFXN3-207ENST00000489434 TNRC18O15417 2968 aaPredicted RBP15.18■□□□□ 0.02
SFXN3-207ENST00000489434 CHRNDQ07001 517 aa15.17■□□□□ 0.02
SFXN3-207ENST00000489434 DLGAP5Q15398 846 aa15.17■□□□□ 0.02
SFXN3-207ENST00000489434 PKN2Q16513 984 aaKnown RBP15.17■□□□□ 0.02
SFXN3-207ENST00000489434 MRS2Q9HD23 443 aa15.17■□□□□ 0.02
SFXN3-207ENST00000489434 CHMP3Q9Y3E7 222 aa15.17■□□□□ 0.02
SFXN3-207ENST00000489434 FANCIQ9NVI1 1328 aa15.17■□□□□ 0.02
SFXN3-207ENST00000489434 CASP7P55210 303 aa15.16■□□□□ 0.02
SFXN3-207ENST00000489434 CCDC184Q52MB2 194 aa15.16■□□□□ 0.02
SFXN3-207ENST00000489434 ZNF804AQ7Z570 1209 aa15.16■□□□□ 0.02
SFXN3-207ENST00000489434 WDR63Q8IWG1 891 aa15.16■□□□□ 0.02
SFXN3-207ENST00000489434 MYO1BO43795 1136 aa15.15■□□□□ 0.02
SFXN3-207ENST00000489434 KLRK1P26718 216 aa15.15■□□□□ 0.02
SFXN3-207ENST00000489434 TM4SF4P48230 202 aa15.15■□□□□ 0.02
SFXN3-207ENST00000489434 TAF7LQ5H9L4 462 aa15.15■□□□□ 0.02
SFXN3-207ENST00000489434 CD209Q9NNX6 404 aa15.15■□□□□ 0.02
SFXN3-207ENST00000489434 ZNF646O15015 1829 aaPredicted RBP15.15■□□□□ 0.02
SFXN3-207ENST00000489434 COL1A1P02452 1464 aaPredicted RBP15.14■□□□□ 0.01
SFXN3-207ENST00000489434 SLC34A2O95436 690 aa15.14■□□□□ 0.01
SFXN3-207ENST00000489434 TBC1D8O95759 1140 aa15.14■□□□□ 0.01
SFXN3-207ENST00000489434 SOX10P56693 466 aa15.14■□□□□ 0.01
SFXN3-207ENST00000489434 PTPN12Q05209 780 aaKnown RBP15.14■□□□□ 0.01
SFXN3-207ENST00000489434 MKRN3Q13064 507 aaKnown RBP15.14■□□□□ 0.01
SFXN3-207ENST00000489434 PRKG1Q13976 671 aa15.14■□□□□ 0.01
SFXN3-207ENST00000489434 CCDC57Q2TAC2 916 aa15.14■□□□□ 0.01
SFXN3-207ENST00000489434 NOM1Q5C9Z4 860 aaKnown RBP15.14■□□□□ 0.01
SFXN3-207ENST00000489434 C15orf52Q6ZUT6 534 aaKnown RBP15.14■□□□□ 0.01
SFXN3-207ENST00000489434 ZNF296Q8WUU4 475 aaPredicted RBP15.14■□□□□ 0.01
SFXN3-207ENST00000489434 DEFB129Q9H1M3 183 aa15.14■□□□□ 0.01
SFXN3-207ENST00000489434 PPP1R12BO60237 982 aaPredicted RBP15.13■□□□□ 0.01
SFXN3-207ENST00000489434 VAMP4O75379 141 aa15.13■□□□□ 0.01
SFXN3-207ENST00000489434 TAF5LO75529 589 aa15.13■□□□□ 0.01
SFXN3-207ENST00000489434 EXOSC9Q06265 439 aaKnown RBP15.13■□□□□ 0.01
SFXN3-207ENST00000489434 HELBQ8NG08 1087 aaPredicted RBP15.13■□□□□ 0.01
SFXN3-207ENST00000489434 SLC10A4Q96EP9 437 aa15.13■□□□□ 0.01
SFXN3-207ENST00000489434 ZBED3Q96IU2 234 aaPredicted RBP15.13■□□□□ 0.01
SFXN3-207ENST00000489434 ANGEL1Q9UNK9 670 aaKnown RBP15.13■□□□□ 0.01
SFXN3-207ENST00000489434 SALL2Q9Y467 1007 aaPredicted RBP15.13■□□□□ 0.01
SFXN3-207ENST00000489434 PPP2R3BQ9Y5P8 575 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms