RNA–Protein interactions for RNA: ENST00000489144.5

POLR2J3-205, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 2

Gene POLR2J3, Length 2,553 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-205ENST00000489144 GOLIM4O00461 696 aa21.7■■□□□ 1.06
POLR2J3-205ENST00000489144 CIAO1O76071 339 aa21.7■■□□□ 1.06
POLR2J3-205ENST00000489144 MAPK8IP2Q13387 824 aaPredicted RBP21.7■■□□□ 1.06
POLR2J3-205ENST00000489144 RC3H1Q5TC82 1133 aaKnown RBP21.7■■□□□ 1.06
POLR2J3-205ENST00000489144 ZNF710Q8N1W2 664 aa21.7■■□□□ 1.06
POLR2J3-205ENST00000489144 PROM2Q8N271 834 aa21.7■■□□□ 1.06
POLR2J3-205ENST00000489144 EVI5LQ96CN4 794 aa21.7■■□□□ 1.06
POLR2J3-205ENST00000489144 A0A0D9SFI3 127 aa21.69■■□□□ 1.06
POLR2J3-205ENST00000489144 GORABQ5T7V8 394 aa21.69■■□□□ 1.06
POLR2J3-205ENST00000489144 XAGE2Q96GT9 111 aa21.69■■□□□ 1.06
POLR2J3-205ENST00000489144 BCORQ6W2J9 1755 aa21.69■■□□□ 1.06
POLR2J3-205ENST00000489144 C4BP0C0L5 1744 aa21.69■■□□□ 1.06
POLR2J3-205ENST00000489144 SCARF1Q14162 830 aa21.69■■□□□ 1.06
POLR2J3-205ENST00000489144 TRAPPC3LQ5T215 181 aa21.69■■□□□ 1.06
POLR2J3-205ENST00000489144 RGS17Q9UGC6 210 aaPredicted RBP21.69■■□□□ 1.06
POLR2J3-205ENST00000489144 ZKSCAN5Q9Y2L8 839 aa21.69■■□□□ 1.06
POLR2J3-205ENST00000489144 NPHP1O15259 732 aa21.68■■□□□ 1.06
POLR2J3-205ENST00000489144 SGSM2O43147 1006 aa21.68■■□□□ 1.06
POLR2J3-205ENST00000489144 ATP5JP18859 108 aa21.68■■□□□ 1.06
POLR2J3-205ENST00000489144 SETDB2Q96T68 719 aa21.68■■□□□ 1.06
POLR2J3-205ENST00000489144 DDX60Q8IY21 1712 aaKnown RBP21.68■■□□□ 1.06
POLR2J3-205ENST00000489144 PTH1RQ03431 593 aa21.68■■□□□ 1.06
POLR2J3-205ENST00000489144 ZNF771Q7L3S4 317 aaPredicted RBP21.68■■□□□ 1.06
POLR2J3-205ENST00000489144 NBPF5PQ86XG9 351 aaPredicted RBP21.68■■□□□ 1.06
POLR2J3-205ENST00000489144 SEC62Q99442 399 aaKnown RBP21.68■■□□□ 1.06
POLR2J3-205ENST00000489144 RXRBP28702 533 aa21.67■■□□□ 1.06
POLR2J3-205ENST00000489144 FKBP4Q02790 459 aaKnown RBP eCLIP21.67■■□□□ 1.06
POLR2J3-205ENST00000489144 POTEAQ6S8J7 498 aa21.67■■□□□ 1.06
POLR2J3-205ENST00000489144 NOL8Q76FK4 1167 aaKnown RBP21.67■■□□□ 1.06
POLR2J3-205ENST00000489144 SPEF2Q9C093 1822 aa21.67■■□□□ 1.06
POLR2J3-205ENST00000489144 PTMSP20962 102 aa21.67■■□□□ 1.06
POLR2J3-205ENST00000489144 CLEC4GQ6UXB4 293 aa21.67■■□□□ 1.06
POLR2J3-205ENST00000489144 HSCBQ8IWL3 235 aa21.67■■□□□ 1.06
POLR2J3-205ENST00000489144 CCDC129Q6ZRS4 1044 aa21.66■■□□□ 1.06
POLR2J3-205ENST00000489144 CERS3Q8IU89 383 aa21.66■■□□□ 1.06
POLR2J3-205ENST00000489144 APBA3O96018 575 aa21.66■■□□□ 1.06
POLR2J3-205ENST00000489144 MPHOSPH8Q99549 860 aa21.66■■□□□ 1.06
POLR2J3-205ENST00000489144 ZNF831Q5JPB2 1677 aa21.66■■□□□ 1.06
POLR2J3-205ENST00000489144 IFIT1P09914 478 aaKnown RBP21.65■■□□□ 1.06
POLR2J3-205ENST00000489144 TXNRD1Q16881 649 aa21.65■■□□□ 1.06
POLR2J3-205ENST00000489144 ZNF589Q86UQ0 364 aaPredicted RBP21.65■■□□□ 1.06
POLR2J3-205ENST00000489144 CLGNO14967 610 aa21.65■■□□□ 1.06
POLR2J3-205ENST00000489144 CCDC152Q4G0S7 254 aa21.65■■□□□ 1.06
POLR2J3-205ENST00000489144 TTC39AQ5SRH9 613 aa21.64■■□□□ 1.06
POLR2J3-205ENST00000489144 HAUS7Q99871 368 aa21.64■■□□□ 1.06
POLR2J3-205ENST00000489144 UPF3BQ9BZI7 483 aaKnown RBP21.64■■□□□ 1.06
POLR2J3-205ENST00000489144 SCN7AQ01118 1682 aa21.64■■□□□ 1.05
POLR2J3-205ENST00000489144 LSG1Q9H089 658 aaKnown RBP21.64■■□□□ 1.05
POLR2J3-205ENST00000489144 C4AP0C0L4 1744 aa21.63■■□□□ 1.05
POLR2J3-205ENST00000489144 VGLL2Q8N8G2 317 aa21.63■■□□□ 1.05
POLR2J3-205ENST00000489144 NFIXQ14938 502 aa21.63■■□□□ 1.05
POLR2J3-205ENST00000489144 PAG1Q9NWQ8 432 aa21.63■■□□□ 1.05
POLR2J3-205ENST00000489144 PDLIM2Q96JY6 352 aa21.62■■□□□ 1.05
POLR2J3-205ENST00000489144 IGSF3O75054 1194 aa21.62■■□□□ 1.05
POLR2J3-205ENST00000489144 GTF2F1P35269 517 aaKnown RBP eCLIP21.62■■□□□ 1.05
POLR2J3-205ENST00000489144 CELF1Q92879 486 aaKnown RBP21.62■■□□□ 1.05
POLR2J3-205ENST00000489144 GPR108Q9NPR9 543 aa21.62■■□□□ 1.05
POLR2J3-205ENST00000489144 PDE8BO95263 885 aa21.61■■□□□ 1.05
POLR2J3-205ENST00000489144 CPA1P15085 419 aa21.61■■□□□ 1.05
POLR2J3-205ENST00000489144 ZNF827Q17R98 1081 aa21.61■■□□□ 1.05
POLR2J3-205ENST00000489144 RASEFQ8IZ41 740 aa21.61■■□□□ 1.05
POLR2J3-205ENST00000489144 ZAP70P43403 619 aa21.61■■□□□ 1.05
POLR2J3-205ENST00000489144 PHKA1P46020 1223 aa21.61■■□□□ 1.05
POLR2J3-205ENST00000489144 FBXO41Q8TF61 875 aa21.61■■□□□ 1.05
POLR2J3-205ENST00000489144 IQSEC3Q9UPP2 1182 aaPredicted RBP21.61■■□□□ 1.05
POLR2J3-205ENST00000489144 AKAP2Q9Y2D5 859 aa21.61■■□□□ 1.05
POLR2J3-205ENST00000489144 LARP6Q9BRS8 491 aaKnown RBP21.6■■□□□ 1.05
POLR2J3-205ENST00000489144 IGHMBP2P38935 993 aaKnown RBP21.6■■□□□ 1.05
POLR2J3-205ENST00000489144 COL9A3Q14050 684 aaPredicted RBP21.6■■□□□ 1.05
POLR2J3-205ENST00000489144 CCDC158Q5M9N0 1113 aa21.6■■□□□ 1.05
POLR2J3-205ENST00000489144 PRIMPOLQ96LW4 560 aa21.6■■□□□ 1.05
POLR2J3-205ENST00000489144 KCNG1Q9UIX4 513 aa21.6■■□□□ 1.05
POLR2J3-205ENST00000489144 NEK4P51957 841 aa21.59■■□□□ 1.05
POLR2J3-205ENST00000489144 PRPF40BQ6NWY9 871 aaKnown RBP21.59■■□□□ 1.05
POLR2J3-205ENST00000489144 GBP4Q96PP9 640 aa21.59■■□□□ 1.05
POLR2J3-205ENST00000489144 RAD50Q92878 1312 aa21.59■■□□□ 1.05
POLR2J3-205ENST00000489144 CCDC66A2RUB6 948 aa21.59■■□□□ 1.05
POLR2J3-205ENST00000489144 SPDYE4A6NLX3 237 aa21.59■■□□□ 1.05
POLR2J3-205ENST00000489144 PSEN1P49768 467 aa21.59■■□□□ 1.05
POLR2J3-205ENST00000489144 TAF6LQ9Y6J9 622 aa21.59■■□□□ 1.05
POLR2J3-205ENST00000489144 MCAMP43121 646 aa21.58■■□□□ 1.05
POLR2J3-205ENST00000489144 CHRNDQ07001 517 aa21.58■■□□□ 1.05
POLR2J3-205ENST00000489144 TFCP2L1Q9NZI6 479 aa21.58■■□□□ 1.05
POLR2J3-205ENST00000489144 GYS1P13807 737 aa21.58■■□□□ 1.04
POLR2J3-205ENST00000489144 HMGN5P82970 282 aaKnown RBP21.58■■□□□ 1.04
POLR2J3-205ENST00000489144 RABEP1Q15276 862 aa21.58■■□□□ 1.04
POLR2J3-205ENST00000489144 YY1AP1Q9H869 796 aa21.58■■□□□ 1.04
POLR2J3-205ENST00000489144 RUFY2Q8WXA3 655 aa21.57■■□□□ 1.04
POLR2J3-205ENST00000489144 TIGD1Q96MW7 591 aa21.57■■□□□ 1.04
POLR2J3-205ENST00000489144 DTNBO60941 627 aa21.57■■□□□ 1.04
POLR2J3-205ENST00000489144 TPTE2Q6XPS3 522 aa21.57■■□□□ 1.04
POLR2J3-205ENST00000489144 KBTBD3Q8NAB2 608 aa21.57■■□□□ 1.04
POLR2J3-205ENST00000489144 CASZ1Q86V15 1759 aa21.56■■□□□ 1.04
POLR2J3-205ENST00000489144 MCCP23508 829 aa21.56■■□□□ 1.04
POLR2J3-205ENST00000489144 FBXO3Q9UK99 471 aa21.56■■□□□ 1.04
POLR2J3-205ENST00000489144 UBR3Q6ZT12 1888 aa21.56■■□□□ 1.04
POLR2J3-205ENST00000489144 HSPA4P34932 840 aa21.56■■□□□ 1.04
POLR2J3-205ENST00000489144 PUM3Q15397 648 aaKnown RBP21.56■■□□□ 1.04
POLR2J3-205ENST00000489144 SLC27A3Q5K4L6 730 aa21.56■■□□□ 1.04
POLR2J3-205ENST00000489144 CCDC102BQ68D86 513 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms