RNA–Protein interactions for RNA: ENST00000488935.5

ERGIC3-217, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-217ENST00000488935 SULF1Q8IWU6 871 aa20.36■□□□□ 0.85
ERGIC3-217ENST00000488935 HHIPL1Q96JK4 782 aa20.36■□□□□ 0.85
ERGIC3-217ENST00000488935 BSDC1Q9NW68 430 aaPredicted RBP20.36■□□□□ 0.85
ERGIC3-217ENST00000488935 VAMP4O75379 141 aa20.35■□□□□ 0.85
ERGIC3-217ENST00000488935 USP17L8P0C7I0 530 aa20.35■□□□□ 0.85
ERGIC3-217ENST00000488935 ITGA6P23229 1130 aa20.35■□□□□ 0.85
ERGIC3-217ENST00000488935 ZNF157P51786 506 aaPredicted RBP20.35■□□□□ 0.85
ERGIC3-217ENST00000488935 BRPF1P55201 1214 aaPredicted RBP20.35■□□□□ 0.85
ERGIC3-217ENST00000488935 ZNF280AP59817 542 aaPredicted RBP20.35■□□□□ 0.85
ERGIC3-217ENST00000488935 AGBL3Q8NEM8 1001 aa20.35■□□□□ 0.85
ERGIC3-217ENST00000488935 MYOZ2Q9NPC6 264 aa20.35■□□□□ 0.85
ERGIC3-217ENST00000488935 CASP7P55210 303 aa20.34■□□□□ 0.85
ERGIC3-217ENST00000488935 KIF23Q02241 960 aaPredicted RBP20.34■□□□□ 0.85
ERGIC3-217ENST00000488935 NBPF9Q3BBW0 867 aa20.34■□□□□ 0.85
ERGIC3-217ENST00000488935 DNAAF4Q8WXU2 420 aa20.34■□□□□ 0.85
ERGIC3-217ENST00000488935 CHMP4AQ9BY43 222 aa20.34■□□□□ 0.85
ERGIC3-217ENST00000488935 NOGQ13253 232 aa20.33■□□□□ 0.85
ERGIC3-217ENST00000488935 HELBQ8NG08 1087 aaPredicted RBP20.33■□□□□ 0.85
ERGIC3-217ENST00000488935 ZNF646O15015 1829 aaPredicted RBP20.32■□□□□ 0.84
ERGIC3-217ENST00000488935 IL16Q14005 1332 aa20.32■□□□□ 0.84
ERGIC3-217ENST00000488935 IGHMBP2P38935 993 aaKnown RBP20.32■□□□□ 0.84
ERGIC3-217ENST00000488935 DACT2Q5SW24 774 aa20.32■□□□□ 0.84
ERGIC3-217ENST00000488935 PODNQ7Z5L7 613 aa20.32■□□□□ 0.84
ERGIC3-217ENST00000488935 MCOLN1Q9GZU1 580 aa20.32■□□□□ 0.84
ERGIC3-217ENST00000488935 TAF5LO75529 589 aa20.31■□□□□ 0.84
ERGIC3-217ENST00000488935 FAM9BQ8IZU0 186 aa20.31■□□□□ 0.84
ERGIC3-217ENST00000488935 CHMP3Q9Y3E7 222 aa20.31■□□□□ 0.84
ERGIC3-217ENST00000488935 MED23Q9ULK4 1368 aa20.31■□□□□ 0.84
ERGIC3-217ENST00000488935 ANP32CO43423 234 aa20.3■□□□□ 0.84
ERGIC3-217ENST00000488935 SASH1O94885 1247 aa20.3■□□□□ 0.84
ERGIC3-217ENST00000488935 ZNF804BA4D1E1 1349 aa20.29■□□□□ 0.84
ERGIC3-217ENST00000488935 UBE2Q2LH0YL09 131 aa20.29■□□□□ 0.84
ERGIC3-217ENST00000488935 TRPA1O75762 1119 aa20.29■□□□□ 0.84
ERGIC3-217ENST00000488935 CSF1RP07333 972 aa20.29■□□□□ 0.84
ERGIC3-217ENST00000488935 CHRNDQ07001 517 aa20.29■□□□□ 0.84
ERGIC3-217ENST00000488935 DGKZQ13574 1117 aa20.29■□□□□ 0.84
ERGIC3-217ENST00000488935 MPHOSPH8Q99549 860 aa20.29■□□□□ 0.84
ERGIC3-217ENST00000488935 PLA2G12BQ9BX93 195 aa20.29■□□□□ 0.84
ERGIC3-217ENST00000488935 ZNF316A6NFI3 1004 aaPredicted RBP20.28■□□□□ 0.84
ERGIC3-217ENST00000488935 GTF2IP78347 998 aa20.28■□□□□ 0.84
ERGIC3-217ENST00000488935 FOXO4P98177 505 aa20.28■□□□□ 0.84
ERGIC3-217ENST00000488935 PRKG1Q13976 671 aa20.28■□□□□ 0.84
ERGIC3-217ENST00000488935 EPHA10Q5JZY3 1008 aa20.28■□□□□ 0.84
ERGIC3-217ENST00000488935 KIAA0825Q8IV33 1275 aa20.28■□□□□ 0.84
ERGIC3-217ENST00000488935 LINS1Q8NG48 757 aa20.28■□□□□ 0.84
ERGIC3-217ENST00000488935 ZNF594Q96JF6 807 aaPredicted RBP20.28■□□□□ 0.84
ERGIC3-217ENST00000488935 CSRNP1Q96S65 589 aa20.28■□□□□ 0.84
ERGIC3-217ENST00000488935 MYH16Q9H6N6 1097 aa20.28■□□□□ 0.84
ERGIC3-217ENST00000488935 RNF186Q9NXI6 227 aa20.28■□□□□ 0.84
ERGIC3-217ENST00000488935 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.28■□□□□ 0.84
ERGIC3-217ENST00000488935 JAG2Q9Y219 1238 aa20.28■□□□□ 0.84
ERGIC3-217ENST00000488935 PCDHAC2Q9Y5I4 1007 aa20.28■□□□□ 0.84
ERGIC3-217ENST00000488935 AKAP11Q9UKA4 1901 aa20.27■□□□□ 0.84
ERGIC3-217ENST00000488935 CACNA1FO60840 1977 aa20.27■□□□□ 0.84
ERGIC3-217ENST00000488935 CA12O43570 354 aa20.27■□□□□ 0.84
ERGIC3-217ENST00000488935 SLC10A3P09131 477 aa20.27■□□□□ 0.84
ERGIC3-217ENST00000488935 KCNJ4P48050 445 aa20.27■□□□□ 0.84
ERGIC3-217ENST00000488935 MKRN3Q13064 507 aaKnown RBP20.27■□□□□ 0.84
ERGIC3-217ENST00000488935 TTLL5Q6EMB2 1281 aa20.27■□□□□ 0.84
ERGIC3-217ENST00000488935 RASAL3Q86YV0 1011 aa20.27■□□□□ 0.84
ERGIC3-217ENST00000488935 WDR63Q8IWG1 891 aa20.27■□□□□ 0.84
ERGIC3-217ENST00000488935 CCDC102AQ96A19 550 aa20.27■□□□□ 0.84
ERGIC3-217ENST00000488935 COA1Q9GZY4 146 aa20.27■□□□□ 0.84
ERGIC3-217ENST00000488935 FZD1Q9UP38 647 aa20.27■□□□□ 0.84
ERGIC3-217ENST00000488935 LEMD3Q9Y2U8 911 aa20.27■□□□□ 0.84
ERGIC3-217ENST00000488935 WNT10BO00744 389 aa20.26■□□□□ 0.83
ERGIC3-217ENST00000488935 PLIN1O60240 522 aa20.26■□□□□ 0.83
ERGIC3-217ENST00000488935 BEND3Q5T5X7 828 aa20.26■□□□□ 0.83
ERGIC3-217ENST00000488935 ZNF609O15014 1411 aa20.26■□□□□ 0.83
ERGIC3-217ENST00000488935 ANKRD18BA2A2Z9 1011 aa20.25■□□□□ 0.83
ERGIC3-217ENST00000488935 TTLL12Q14166 644 aaPredicted RBP20.25■□□□□ 0.83
ERGIC3-217ENST00000488935 STRIP1Q5VSL9 837 aa20.25■□□□□ 0.83
ERGIC3-217ENST00000488935 F8W031 263 aaPredicted RBP20.24■□□□□ 0.83
ERGIC3-217ENST00000488935 LMBR1LQ6UX01 489 aa20.24■□□□□ 0.83
ERGIC3-217ENST00000488935 ANKRD2Q9GZV1 360 aa20.24■□□□□ 0.83
ERGIC3-217ENST00000488935 SLC4A10Q6U841 1118 aa20.23■□□□□ 0.83
ERGIC3-217ENST00000488935 OGFOD1Q8N543 542 aa20.23■□□□□ 0.83
ERGIC3-217ENST00000488935 CERS5Q8N5B7 392 aa20.23■□□□□ 0.83
ERGIC3-217ENST00000488935 CD209Q9NNX6 404 aa20.23■□□□□ 0.83
ERGIC3-217ENST00000488935 A0A1B0GUL6 1792 aa20.23■□□□□ 0.83
ERGIC3-217ENST00000488935 IFIT5Q13325 482 aaKnown RBP20.22■□□□□ 0.83
ERGIC3-217ENST00000488935 PITPNM2Q9BZ72 1349 aa20.22■□□□□ 0.83
ERGIC3-217ENST00000488935 IRS2Q9Y4H2 1338 aa20.22■□□□□ 0.83
ERGIC3-217ENST00000488935 PAPPA2Q9BXP8 1791 aa20.21■□□□□ 0.83
ERGIC3-217ENST00000488935 AOX1Q06278 1338 aa20.21■□□□□ 0.83
ERGIC3-217ENST00000488935 NCBP3Q53F19 620 aaKnown RBP20.2■□□□□ 0.82
ERGIC3-217ENST00000488935 GRM8O00222 908 aa20.19■□□□□ 0.82
ERGIC3-217ENST00000488935 TBC1D8O95759 1140 aa20.19■□□□□ 0.82
ERGIC3-217ENST00000488935 PTPN12Q05209 780 aaKnown RBP20.18■□□□□ 0.82
ERGIC3-217ENST00000488935 TAF7LQ5H9L4 462 aa20.18■□□□□ 0.82
ERGIC3-217ENST00000488935 SUCLG2Q96I99 432 aa20.18■□□□□ 0.82
ERGIC3-217ENST00000488935 ZBED3Q96IU2 234 aaPredicted RBP20.18■□□□□ 0.82
ERGIC3-217ENST00000488935 PUS3Q9BZE2 481 aaKnown RBP20.18■□□□□ 0.82
ERGIC3-217ENST00000488935 C9orf78Q9NZ63 289 aaPredicted RBP20.18■□□□□ 0.82
ERGIC3-217ENST00000488935 MYO3BQ8WXR4 1341 aa20.18■□□□□ 0.82
ERGIC3-217ENST00000488935 CLRN2A0PK11 232 aa20.17■□□□□ 0.82
ERGIC3-217ENST00000488935 LDHAL6AQ6ZMR3 332 aa20.17■□□□□ 0.82
ERGIC3-217ENST00000488935 CNNM1Q9NRU3 951 aa20.17■□□□□ 0.82
ERGIC3-217ENST00000488935 SAGE1Q9NXZ1 904 aa20.17■□□□□ 0.82
ERGIC3-217ENST00000488935 HDAC9Q9UKV0 1011 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms