RNA–Protein interactions for RNA: ENST00000488934.1

SF3A3-207, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 5

Gene SF3A3, Length 273 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-207ENST00000488934 KTN1Q86UP2 1357 aaKnown RBP7.11□□□□□ -1.27
SF3A3-207ENST00000488934 ST20-MTHFSA0A0A6YYL1 179 aa7.11□□□□□ -1.27
SF3A3-207ENST00000488934 A6NJY4 79 aa7.11□□□□□ -1.27
SF3A3-207ENST00000488934 TMEM229AB2RXF0 380 aa7.11□□□□□ -1.27
SF3A3-207ENST00000488934 PLA2G4AP47712 749 aa7.11□□□□□ -1.27
SF3A3-207ENST00000488934 EFHC2Q5JST6 749 aa7.11□□□□□ -1.27
SF3A3-207ENST00000488934 UNC5CLQ8IV45 518 aa7.11□□□□□ -1.27
SF3A3-207ENST00000488934 UCN2Q96RP3 112 aa7.11□□□□□ -1.27
SF3A3-207ENST00000488934 GPAMQ9HCL2 828 aa7.11□□□□□ -1.27
SF3A3-207ENST00000488934 PRDM11Q9NQV5 511 aa7.11□□□□□ -1.27
SF3A3-207ENST00000488934 TERF2IPQ9NYB0 399 aa7.11□□□□□ -1.27
SF3A3-207ENST00000488934 PHF24Q9UPV7 400 aa7.11□□□□□ -1.27
SF3A3-207ENST00000488934 SLIT3O75094 1523 aa7.11□□□□□ -1.27
SF3A3-207ENST00000488934 CPDO75976 1380 aa7.1□□□□□ -1.27
SF3A3-207ENST00000488934 USP19O94966 1318 aa7.1□□□□□ -1.27
SF3A3-207ENST00000488934 PALM3A6NDB9 673 aaPredicted RBP7.1□□□□□ -1.27
SF3A3-207ENST00000488934 CDK2AP1O14519 115 aa7.1□□□□□ -1.27
SF3A3-207ENST00000488934 STAU1O95793 577 aaKnown RBP7.1□□□□□ -1.27
SF3A3-207ENST00000488934 LARGE2Q8N3Y3 721 aa7.1□□□□□ -1.27
SF3A3-207ENST00000488934 KCNH5Q8NCM2 988 aa7.1□□□□□ -1.27
SF3A3-207ENST00000488934 TESK2Q96S53 571 aa7.1□□□□□ -1.27
SF3A3-207ENST00000488934 DNAAF2Q9NVR5 837 aaKnown RBP7.1□□□□□ -1.27
SF3A3-207ENST00000488934 CUEDC1Q9NWM3 386 aaPredicted RBP7.1□□□□□ -1.27
SF3A3-207ENST00000488934 MKRN1Q9UHC7 482 aaKnown RBP7.1□□□□□ -1.27
SF3A3-207ENST00000488934 ABCC6O95255 1503 aa7.1□□□□□ -1.27
SF3A3-207ENST00000488934 RGS12O14924 1447 aa7.1□□□□□ -1.27
SF3A3-207ENST00000488934 EDC4Q6P2E9 1401 aaKnown RBP7.1□□□□□ -1.27
SF3A3-207ENST00000488934 SSH2Q76I76 1423 aa7.1□□□□□ -1.27
SF3A3-207ENST00000488934 TATP17735 454 aaPredicted RBP7.09□□□□□ -1.27
SF3A3-207ENST00000488934 MSX1P28360 303 aa7.09□□□□□ -1.27
SF3A3-207ENST00000488934 MTFR1Q15390 333 aa7.09□□□□□ -1.27
SF3A3-207ENST00000488934 VPS72Q15906 364 aa7.09□□□□□ -1.27
SF3A3-207ENST00000488934 DBN1Q16643 649 aa7.09□□□□□ -1.27
SF3A3-207ENST00000488934 CCDC102BQ68D86 513 aa7.09□□□□□ -1.27
SF3A3-207ENST00000488934 TPCN2Q8NHX9 752 aa7.09□□□□□ -1.27
SF3A3-207ENST00000488934 TMC1Q8TDI8 760 aa7.09□□□□□ -1.27
SF3A3-207ENST00000488934 GTPBP3Q969Y2 492 aaKnown RBP7.09□□□□□ -1.27
SF3A3-207ENST00000488934 ZNF358Q9NW07 568 aa7.09□□□□□ -1.27
SF3A3-207ENST00000488934 CHMP3Q9Y3E7 222 aa7.09□□□□□ -1.27
SF3A3-207ENST00000488934 LMO7Q8WWI1 1683 aa7.09□□□□□ -1.27
SF3A3-207ENST00000488934 ANKRD36BQ8N2N9 1353 aa7.08□□□□□ -1.28
SF3A3-207ENST00000488934 KIAA0232Q92628 1395 aa7.08□□□□□ -1.28
SF3A3-207ENST00000488934 GLI3P10071 1580 aa7.08□□□□□ -1.28
SF3A3-207ENST00000488934 FAM83GA6ND36 823 aa7.08□□□□□ -1.28
SF3A3-207ENST00000488934 KRT76Q01546 638 aa7.08□□□□□ -1.28
SF3A3-207ENST00000488934 SRSF11Q05519 484 aaKnown RBP7.08□□□□□ -1.28
SF3A3-207ENST00000488934 FIGNL1Q6PIW4 674 aa7.08□□□□□ -1.28
SF3A3-207ENST00000488934 OGFOD1Q8N543 542 aa7.08□□□□□ -1.28
SF3A3-207ENST00000488934 AIDAQ96BJ3 306 aa7.08□□□□□ -1.28
SF3A3-207ENST00000488934 MBIPQ9NS73 344 aa7.08□□□□□ -1.28
SF3A3-207ENST00000488934 BTG4Q9NY30 223 aa7.08□□□□□ -1.28
SF3A3-207ENST00000488934 TFIP11Q9UBB9 837 aaKnown RBP7.08□□□□□ -1.28
SF3A3-207ENST00000488934 CCDC9Q9Y3X0 531 aaKnown RBP7.08□□□□□ -1.28
SF3A3-207ENST00000488934 MAFBQ9Y5Q3 323 aaPredicted RBP7.08□□□□□ -1.28
SF3A3-207ENST00000488934 CD163L1Q9NR16 1453 aa7.08□□□□□ -1.28
SF3A3-207ENST00000488934 KIF20BQ96Q89 1820 aa7.08□□□□□ -1.28
SF3A3-207ENST00000488934 A0A1W2PP64 1363 aa7.08□□□□□ -1.28
SF3A3-207ENST00000488934 TTC21BQ7Z4L5 1316 aa7.07□□□□□ -1.28
SF3A3-207ENST00000488934 MYOM1P52179 1685 aa7.07□□□□□ -1.28
SF3A3-207ENST00000488934 M0R2N6 131 aa7.07□□□□□ -1.28
SF3A3-207ENST00000488934 GCP02774 474 aa7.07□□□□□ -1.28
SF3A3-207ENST00000488934 RNFT1Q5M7Z0 435 aa7.07□□□□□ -1.28
SF3A3-207ENST00000488934 LARP1Q6PKG0 1096 aaKnown RBP7.07□□□□□ -1.28
SF3A3-207ENST00000488934 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.07□□□□□ -1.28
SF3A3-207ENST00000488934 PPP1R12CQ9BZL4 782 aa7.07□□□□□ -1.28
SF3A3-207ENST00000488934 ZDHHC3Q9NYG2 299 aa7.07□□□□□ -1.28
SF3A3-207ENST00000488934 SCHIP1Q9P0W5 487 aaPredicted RBP7.07□□□□□ -1.28
SF3A3-207ENST00000488934 LTN1O94822 1766 aa7.07□□□□□ -1.28
SF3A3-207ENST00000488934 USP31Q70CQ4 1352 aa7.07□□□□□ -1.28
SF3A3-207ENST00000488934 SLURP2P0DP57 97 aa7.06□□□□□ -1.28
SF3A3-207ENST00000488934 MX2P20592 715 aa7.06□□□□□ -1.28
SF3A3-207ENST00000488934 RASA1P20936 1047 aa7.06□□□□□ -1.28
SF3A3-207ENST00000488934 ZC3H6P61129 1189 aaKnown RBP7.06□□□□□ -1.28
SF3A3-207ENST00000488934 MAP3K10Q02779 954 aa7.06□□□□□ -1.28
SF3A3-207ENST00000488934 NUTM2GQ5VZR2 741 aa7.06□□□□□ -1.28
SF3A3-207ENST00000488934 SIX5Q8N196 739 aa7.06□□□□□ -1.28
SF3A3-207ENST00000488934 SVOPQ8N4V2 548 aa7.06□□□□□ -1.28
SF3A3-207ENST00000488934 CFHR5Q9BXR6 569 aa7.06□□□□□ -1.28
SF3A3-207ENST00000488934 SLC12A5Q9H2X9 1139 aa7.06□□□□□ -1.28
SF3A3-207ENST00000488934 CRISPLD1Q9H336 500 aa7.06□□□□□ -1.28
SF3A3-207ENST00000488934 RUBCNLQ9H714 662 aa7.06□□□□□ -1.28
SF3A3-207ENST00000488934 GJA3Q9Y6H8 435 aa7.06□□□□□ -1.28
SF3A3-207ENST00000488934 AATKQ6ZMQ8 1374 aa7.06□□□□□ -1.28
SF3A3-207ENST00000488934 FAM208AQ9UK61 1670 aaKnown RBP7.06□□□□□ -1.28
SF3A3-207ENST00000488934 BRWD3Q6RI45 1802 aa7.06□□□□□ -1.28
SF3A3-207ENST00000488934 GPR25O00155 361 aa7.05□□□□□ -1.28
SF3A3-207ENST00000488934 EVA1CP58658 441 aa7.05□□□□□ -1.28
SF3A3-207ENST00000488934 CLDN10P78369 228 aa7.05□□□□□ -1.28
SF3A3-207ENST00000488934 ARSJQ5FYB0 599 aaPredicted RBP7.05□□□□□ -1.28
SF3A3-207ENST00000488934 NLRP8Q86W28 1048 aa7.05□□□□□ -1.28
SF3A3-207ENST00000488934 ZNF594Q96JF6 807 aaPredicted RBP7.05□□□□□ -1.28
SF3A3-207ENST00000488934 ENAMQ9NRM1 1142 aa7.05□□□□□ -1.28
SF3A3-207ENST00000488934 ATXN7L1Q9ULK2 861 aaPredicted RBP7.05□□□□□ -1.28
SF3A3-207ENST00000488934 IQSEC3Q9UPP2 1182 aaPredicted RBP7.05□□□□□ -1.28
SF3A3-207ENST00000488934 THSD7AQ9UPZ6 1657 aa7.05□□□□□ -1.28
SF3A3-207ENST00000488934 CAMTA1Q9Y6Y1 1673 aa7.05□□□□□ -1.28
SF3A3-207ENST00000488934 NFAT5O94916 1531 aa7.05□□□□□ -1.28
SF3A3-207ENST00000488934 COL5A2P05997 1499 aaPredicted RBP7.04□□□□□ -1.28
SF3A3-207ENST00000488934 SPATA31A5Q5VU36 1347 aa7.04□□□□□ -1.28
SF3A3-207ENST00000488934 SPATA31A7Q8IWB4 1347 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms