RNA–Protein interactions for RNA: ENST00000488931.1

CASQ2-202, Transcript of calsequestrin 2, humanhuman

TSL 3

Gene CASQ2, Length 220 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ2-202ENST00000488931 ARHGAP39Q9C0H5 1083 aa13.72□□□□□ -0.21
CASQ2-202ENST00000488931 MANSC4A6NHS7 340 aaPredicted RBP13.71□□□□□ -0.21
CASQ2-202ENST00000488931 G3V3G9 751 aa13.71□□□□□ -0.21
CASQ2-202ENST00000488931 PER1O15534 1290 aaPredicted RBP13.71□□□□□ -0.21
CASQ2-202ENST00000488931 SP3Q02447 781 aa13.71□□□□□ -0.21
CASQ2-202ENST00000488931 DCAF8Q5TAQ9 597 aa13.71□□□□□ -0.21
CASQ2-202ENST00000488931 ARMC9Q7Z3E5 817 aa13.71□□□□□ -0.21
CASQ2-202ENST00000488931 FAM89AQ96GI7 184 aa13.71□□□□□ -0.21
CASQ2-202ENST00000488931 ZC3H12CQ9C0D7 883 aaKnown RBP13.71□□□□□ -0.21
CASQ2-202ENST00000488931 SEC31BQ9NQW1 1179 aa13.71□□□□□ -0.21
CASQ2-202ENST00000488931 LAMA2P24043 3122 aaKnown RBP13.7□□□□□ -0.22
CASQ2-202ENST00000488931 U2AF1L5P0DN76 240 aaPredicted RBP13.7□□□□□ -0.22
CASQ2-202ENST00000488931 NF2P35240 595 aa13.7□□□□□ -0.22
CASQ2-202ENST00000488931 U2AF1Q01081 240 aaKnown RBP eCLIP13.7□□□□□ -0.22
CASQ2-202ENST00000488931 MTFR1Q15390 333 aa13.7□□□□□ -0.22
CASQ2-202ENST00000488931 XAGE3Q8WTP9 111 aa13.7□□□□□ -0.22
CASQ2-202ENST00000488931 FBXW7Q969H0 707 aa13.7□□□□□ -0.22
CASQ2-202ENST00000488931 PRUNE2Q8WUY3 3088 aa13.7□□□□□ -0.22
CASQ2-202ENST00000488931 COPS6Q7L5N1 327 aa13.69□□□□□ -0.22
CASQ2-202ENST00000488931 SLC10A4Q96EP9 437 aa13.68□□□□□ -0.22
CASQ2-202ENST00000488931 ANKIB1Q9P2G1 1089 aa13.68□□□□□ -0.22
CASQ2-202ENST00000488931 PCDHAC2Q9Y5I4 1007 aa13.68□□□□□ -0.22
CASQ2-202ENST00000488931 USP17L3A6NCW0 530 aa13.67□□□□□ -0.22
CASQ2-202ENST00000488931 USP17L4A6NCW7 530 aa13.67□□□□□ -0.22
CASQ2-202ENST00000488931 ATP5J2-PTCD1G3V325 749 aa13.67□□□□□ -0.22
CASQ2-202ENST00000488931 SF3B3Q15393 1217 aaKnown RBP13.67□□□□□ -0.22
CASQ2-202ENST00000488931 USP17L1Q7RTZ2 530 aa13.67□□□□□ -0.22
CASQ2-202ENST00000488931 CNKSR2Q8WXI2 1034 aa13.67□□□□□ -0.22
CASQ2-202ENST00000488931 CCDC85AQ96PX6 553 aaPredicted RBP13.67□□□□□ -0.22
CASQ2-202ENST00000488931 GGA1Q9UJY5 639 aa13.67□□□□□ -0.22
CASQ2-202ENST00000488931 AOX1Q06278 1338 aa13.66□□□□□ -0.22
CASQ2-202ENST00000488931 ERBB4Q15303 1308 aa13.66□□□□□ -0.22
CASQ2-202ENST00000488931 RPS8P62241 208 aaKnown RBP13.66□□□□□ -0.22
CASQ2-202ENST00000488931 DACT2Q5SW24 774 aa13.66□□□□□ -0.22
CASQ2-202ENST00000488931 PODXL2Q9NZ53 605 aa13.66□□□□□ -0.22
CASQ2-202ENST00000488931 MYH3P11055 1940 aa13.66□□□□□ -0.22
CASQ2-202ENST00000488931 MGAMO43451 1857 aa13.65□□□□□ -0.22
CASQ2-202ENST00000488931 ZBTB7BO15156 539 aaPredicted RBP13.65□□□□□ -0.22
CASQ2-202ENST00000488931 HTATSF1O43719 755 aaKnown RBP13.65□□□□□ -0.22
CASQ2-202ENST00000488931 ZBTB48P10074 688 aaPredicted RBP13.65□□□□□ -0.22
CASQ2-202ENST00000488931 NBPF11Q86T75 865 aa13.65□□□□□ -0.22
CASQ2-202ENST00000488931 STAP2Q9UGK3 403 aa13.65□□□□□ -0.22
CASQ2-202ENST00000488931 KRT24Q2M2I5 525 aa13.64□□□□□ -0.23
CASQ2-202ENST00000488931 HSP90AB3PQ58FF7 597 aa13.64□□□□□ -0.23
CASQ2-202ENST00000488931 UBE2Q1Q7Z7E8 422 aa13.64□□□□□ -0.23
CASQ2-202ENST00000488931 DEFB123Q8N688 67 aa13.64□□□□□ -0.23
CASQ2-202ENST00000488931 A0A1B0GUL6 1792 aa13.63□□□□□ -0.23
CASQ2-202ENST00000488931 INHBEP58166 350 aa13.63□□□□□ -0.23
CASQ2-202ENST00000488931 APOBEC3FQ8IUX4 373 aaKnown RBP13.63□□□□□ -0.23
CASQ2-202ENST00000488931 KIAA0825Q8IV33 1275 aa13.63□□□□□ -0.23
CASQ2-202ENST00000488931 JARID2Q92833 1246 aaPredicted RBP13.63□□□□□ -0.23
CASQ2-202ENST00000488931 ELP3Q9H9T3 547 aa13.63□□□□□ -0.23
CASQ2-202ENST00000488931 ARAP2Q8WZ64 1704 aa13.62□□□□□ -0.23
CASQ2-202ENST00000488931 IRS4O14654 1257 aaPredicted RBP13.62□□□□□ -0.23
CASQ2-202ENST00000488931 KLRK1P26718 216 aa13.62□□□□□ -0.23
CASQ2-202ENST00000488931 CTGFP29279 349 aa13.62□□□□□ -0.23
CASQ2-202ENST00000488931 TAF1CQ15572 869 aaPredicted RBP13.62□□□□□ -0.23
CASQ2-202ENST00000488931 MAP3K11Q16584 847 aa13.62□□□□□ -0.23
CASQ2-202ENST00000488931 NBPF12Q5TAG4 269 aaPredicted RBP13.62□□□□□ -0.23
CASQ2-202ENST00000488931 TXNRD3Q86VQ6 643 aa13.62□□□□□ -0.23
CASQ2-202ENST00000488931 FAM43AQ8N2R8 423 aa13.62□□□□□ -0.23
CASQ2-202ENST00000488931 PNISRQ8TF01 805 aaKnown RBP13.62□□□□□ -0.23
CASQ2-202ENST00000488931 BRI3BPQ8WY22 251 aa13.62□□□□□ -0.23
CASQ2-202ENST00000488931 ZBED3Q96IU2 234 aaPredicted RBP13.62□□□□□ -0.23
CASQ2-202ENST00000488931 DEFB129Q9H1M3 183 aa13.62□□□□□ -0.23
CASQ2-202ENST00000488931 COL1A1P02452 1464 aaPredicted RBP13.61□□□□□ -0.23
CASQ2-202ENST00000488931 CLRN2A0PK11 232 aa13.61□□□□□ -0.23
CASQ2-202ENST00000488931 CDAN1Q8IWY9 1227 aa13.61□□□□□ -0.23
CASQ2-202ENST00000488931 OPTNQ96CV9 577 aa13.61□□□□□ -0.23
CASQ2-202ENST00000488931 MS4A4AQ96JQ5 239 aa13.61□□□□□ -0.23
CASQ2-202ENST00000488931 ISCA1Q9BUE6 129 aa13.61□□□□□ -0.23
CASQ2-202ENST00000488931 RAPGEFL1Q9UHV5 662 aa13.61□□□□□ -0.23
CASQ2-202ENST00000488931 TSPYL4Q9UJ04 414 aa13.61□□□□□ -0.23
CASQ2-202ENST00000488931 TESPA1A2RU30 521 aaPredicted RBP13.6□□□□□ -0.23
CASQ2-202ENST00000488931 OGFOD1Q8N543 542 aa13.6□□□□□ -0.23
CASQ2-202ENST00000488931 CFAP53Q96M91 514 aa13.6□□□□□ -0.23
CASQ2-202ENST00000488931 XDHP47989 1333 aa13.6□□□□□ -0.23
CASQ2-202ENST00000488931 USP2O75604 605 aaPredicted RBP13.59□□□□□ -0.23
CASQ2-202ENST00000488931 OTUD7BQ6GQQ9 843 aa13.59□□□□□ -0.23
CASQ2-202ENST00000488931 PODNQ7Z5L7 613 aa13.59□□□□□ -0.23
CASQ2-202ENST00000488931 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.59□□□□□ -0.23
CASQ2-202ENST00000488931 CHPF2Q9P2E5 772 aa13.59□□□□□ -0.23
CASQ2-202ENST00000488931 STXBP5LQ9Y2K9 1186 aa13.59□□□□□ -0.23
CASQ2-202ENST00000488931 MED23Q9ULK4 1368 aa13.58□□□□□ -0.23
CASQ2-202ENST00000488931 MUC3AQ02505 3323 aa13.58□□□□□ -0.24
CASQ2-202ENST00000488931 CCL15-CCL14A0A0B4J2E2 113 aa13.58□□□□□ -0.24
CASQ2-202ENST00000488931 CCL5P13501 91 aa13.58□□□□□ -0.24
CASQ2-202ENST00000488931 CCL15Q16663 113 aa13.58□□□□□ -0.24
CASQ2-202ENST00000488931 HTATIP2Q9BUP3 242 aa13.58□□□□□ -0.24
CASQ2-202ENST00000488931 MTMR10Q9NXD2 777 aa13.58□□□□□ -0.24
CASQ2-202ENST00000488931 NUDCQ9Y266 331 aa13.58□□□□□ -0.24
CASQ2-202ENST00000488931 FARP2O94887 1054 aaPredicted RBP13.57□□□□□ -0.24
CASQ2-202ENST00000488931 LACTBP83111 547 aaPredicted RBP13.57□□□□□ -0.24
CASQ2-202ENST00000488931 NR2E3Q9Y5X4 410 aa13.57□□□□□ -0.24
CASQ2-202ENST00000488931 A0A1W2PPC1 479 aa13.56□□□□□ -0.24
CASQ2-202ENST00000488931 F8W031 263 aaPredicted RBP13.56□□□□□ -0.24
CASQ2-202ENST00000488931 PPP1R12BO60237 982 aaPredicted RBP13.56□□□□□ -0.24
CASQ2-202ENST00000488931 ATP2B4P23634 1241 aa13.56□□□□□ -0.24
CASQ2-202ENST00000488931 GJA8P48165 433 aa13.56□□□□□ -0.24
CASQ2-202ENST00000488931 CERS5Q8N5B7 392 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms