RNA–Protein interactions for RNA: ENST00000488058.1

RNF38-208, Transcript of ring finger protein 38, humanhuman

TSL 3

Gene RNF38, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-208ENST00000488058 USP17L1Q7RTZ2 530 aa29.82■■■□□ 2.36
RNF38-208ENST00000488058 COA1Q9GZY4 146 aa29.82■■■□□ 2.36
RNF38-208ENST00000488058 TMEM88BA6NKF7 163 aa29.81■■■□□ 2.36
RNF38-208ENST00000488058 ANKRD44Q8N8A2 993 aa29.81■■■□□ 2.36
RNF38-208ENST00000488058 FMR1Q06787 632 aaKnown RBP eCLIP29.8■■■□□ 2.36
RNF38-208ENST00000488058 RABL6Q3YEC7 729 aaPredicted RBP29.8■■■□□ 2.36
RNF38-208ENST00000488058 MKRN1Q9UHC7 482 aaKnown RBP29.8■■■□□ 2.36
RNF38-208ENST00000488058 TRAF5O00463 557 aa29.79■■■□□ 2.36
RNF38-208ENST00000488058 AGBL3Q8NEM8 1001 aa29.79■■■□□ 2.36
RNF38-208ENST00000488058 PUS3Q9BZE2 481 aaKnown RBP29.79■■■□□ 2.36
RNF38-208ENST00000488058 EGFRP00533 1210 aa29.78■■■□□ 2.36
RNF38-208ENST00000488058 UBTFL1P0CB47 393 aaPredicted RBP29.77■■■□□ 2.36
RNF38-208ENST00000488058 ZC3H15Q8WU90 426 aaKnown RBP29.77■■■□□ 2.36
RNF38-208ENST00000488058 FRAT1Q92837 279 aaPredicted RBP29.77■■■□□ 2.36
RNF38-208ENST00000488058 GLIS2Q9BZE0 524 aaPredicted RBP29.77■■■□□ 2.36
RNF38-208ENST00000488058 BCAR3O75815 825 aa29.76■■■□□ 2.35
RNF38-208ENST00000488058 KIF4BQ2VIQ3 1234 aa29.76■■■□□ 2.35
RNF38-208ENST00000488058 MXD3Q9BW11 206 aa29.76■■■□□ 2.35
RNF38-208ENST00000488058 TRPM7Q96QT4 1865 aa29.76■■■□□ 2.35
RNF38-208ENST00000488058 PGAP2Q9UHJ9 254 aa29.75■■■□□ 2.35
RNF38-208ENST00000488058 ZBED9Q6R2W3 1325 aa29.74■■■□□ 2.35
RNF38-208ENST00000488058 ZNF609O15014 1411 aa29.74■■■□□ 2.35
RNF38-208ENST00000488058 ZNF646O15015 1829 aaPredicted RBP29.74■■■□□ 2.35
RNF38-208ENST00000488058 KLHDC4Q8TBB5 520 aa29.74■■■□□ 2.35
RNF38-208ENST00000488058 ARHGAP45Q92619 1136 aa29.74■■■□□ 2.35
RNF38-208ENST00000488058 CD209Q9NNX6 404 aa29.74■■■□□ 2.35
RNF38-208ENST00000488058 ABT1Q9ULW3 272 aaKnown RBP29.74■■■□□ 2.35
RNF38-208ENST00000488058 IPO8O15397 1037 aaKnown RBP29.73■■■□□ 2.35
RNF38-208ENST00000488058 USP17L8P0C7I0 530 aa29.73■■■□□ 2.35
RNF38-208ENST00000488058 DACT2Q5SW24 774 aa29.73■■■□□ 2.35
RNF38-208ENST00000488058 STRIP1Q5VSL9 837 aa29.73■■■□□ 2.35
RNF38-208ENST00000488058 ZNF804AQ7Z570 1209 aa29.73■■■□□ 2.35
RNF38-208ENST00000488058 IRS2Q9Y4H2 1338 aa29.72■■■□□ 2.35
RNF38-208ENST00000488058 GTF2IP78347 998 aa29.72■■■□□ 2.35
RNF38-208ENST00000488058 LRRC24Q50LG9 513 aa29.72■■■□□ 2.35
RNF38-208ENST00000488058 TTLL5Q6EMB2 1281 aa29.72■■■□□ 2.35
RNF38-208ENST00000488058 CDC37L1Q7L3B6 337 aa29.72■■■□□ 2.35
RNF38-208ENST00000488058 JMYQ8N9B5 988 aa29.72■■■□□ 2.35
RNF38-208ENST00000488058 GMLQ99445 158 aa29.72■■■□□ 2.35
RNF38-208ENST00000488058 MROH5Q6ZUA9 1318 aa29.71■■■□□ 2.35
RNF38-208ENST00000488058 ZNF280AP59817 542 aaPredicted RBP29.71■■■□□ 2.35
RNF38-208ENST00000488058 C15orf52Q6ZUT6 534 aaKnown RBP29.71■■■□□ 2.35
RNF38-208ENST00000488058 ZNF408Q9H9D4 720 aa29.71■■■□□ 2.35
RNF38-208ENST00000488058 RIPOR2Q9Y4F9 1068 aa29.71■■■□□ 2.35
RNF38-208ENST00000488058 CNTNAP1P78357 1384 aa29.7■■■□□ 2.35
RNF38-208ENST00000488058 METTL24Q5JXM2 366 aa29.7■■■□□ 2.35
RNF38-208ENST00000488058 USP48Q86UV5 1035 aa29.7■■■□□ 2.35
RNF38-208ENST00000488058 DCPSQ96C86 337 aaKnown RBP29.7■■■□□ 2.35
RNF38-208ENST00000488058 TNNQ9UQP3 1299 aa29.7■■■□□ 2.35
RNF38-208ENST00000488058 MYO3BQ8WXR4 1341 aa29.7■■■□□ 2.34
RNF38-208ENST00000488058 CLUAP1Q96AJ1 413 aa29.69■■■□□ 2.34
RNF38-208ENST00000488058 MEIS3Q99687 375 aa29.69■■■□□ 2.34
RNF38-208ENST00000488058 MYOZ2Q9NPC6 264 aa29.69■■■□□ 2.34
RNF38-208ENST00000488058 LRRFIP2Q9Y608 721 aaKnown RBP29.69■■■□□ 2.34
RNF38-208ENST00000488058 POLR2AP24928 1970 aaKnown RBP29.69■■■□□ 2.34
RNF38-208ENST00000488058 CELF2O95319 508 aaKnown RBP29.68■■■□□ 2.34
RNF38-208ENST00000488058 TRIM27P14373 513 aa29.68■■■□□ 2.34
RNF38-208ENST00000488058 UBE4AQ14139 1066 aa29.68■■■□□ 2.34
RNF38-208ENST00000488058 INTS3Q68E01 1043 aaKnown RBP29.68■■■□□ 2.34
RNF38-208ENST00000488058 ATF7IPQ6VMQ6 1270 aa29.68■■■□□ 2.34
RNF38-208ENST00000488058 GGA3Q9NZ52 723 aa29.68■■■□□ 2.34
RNF38-208ENST00000488058 HDAC5Q9UQL6 1122 aa29.68■■■□□ 2.34
RNF38-208ENST00000488058 ASTN2O75129 1339 aaPredicted RBP29.68■■■□□ 2.34
RNF38-208ENST00000488058 CST9Q5W186 159 aa29.67■■■□□ 2.34
RNF38-208ENST00000488058 KRT26Q7Z3Y9 468 aa29.67■■■□□ 2.34
RNF38-208ENST00000488058 OGFOD1Q8N543 542 aa29.67■■■□□ 2.34
RNF38-208ENST00000488058 SCARF1Q14162 830 aa29.66■■■□□ 2.34
RNF38-208ENST00000488058 DEFB115Q30KQ5 88 aa29.66■■■□□ 2.34
RNF38-208ENST00000488058 DLK2Q6UY11 383 aa29.66■■■□□ 2.34
RNF38-208ENST00000488058 ADM5C9JUS6 153 aa29.65■■■□□ 2.34
RNF38-208ENST00000488058 GYG1P46976 350 aa29.65■■■□□ 2.34
RNF38-208ENST00000488058 ZKSCAN2Q63HK3 967 aa29.65■■■□□ 2.34
RNF38-208ENST00000488058 PAXIP1Q6ZW49 1069 aaPredicted RBP29.65■■■□□ 2.34
RNF38-208ENST00000488058 KIAA0825Q8IV33 1275 aa29.65■■■□□ 2.34
RNF38-208ENST00000488058 JAG2Q9Y219 1238 aa29.65■■■□□ 2.34
RNF38-208ENST00000488058 IL1R1P14778 569 aa29.64■■■□□ 2.34
RNF38-208ENST00000488058 RFX5P48382 616 aaPredicted RBP29.64■■■□□ 2.34
RNF38-208ENST00000488058 ANGEL2Q5VTE6 544 aaKnown RBP29.64■■■□□ 2.34
RNF38-208ENST00000488058 RASSF10A6NK89 507 aa29.63■■■□□ 2.33
RNF38-208ENST00000488058 VEGFBP49765 207 aa29.63■■■□□ 2.33
RNF38-208ENST00000488058 SULF1Q8IWU6 871 aa29.63■■■□□ 2.33
RNF38-208ENST00000488058 HDAC9Q9UKV0 1011 aa29.63■■■□□ 2.33
RNF38-208ENST00000488058 EYA2O00167 538 aa29.62■■■□□ 2.33
RNF38-208ENST00000488058 PDE8BO95263 885 aa29.62■■■□□ 2.33
RNF38-208ENST00000488058 GNAI3P08754 354 aa29.62■■■□□ 2.33
RNF38-208ENST00000488058 HIBADHP31937 336 aaKnown RBP29.62■■■□□ 2.33
RNF38-208ENST00000488058 PTPN12Q05209 780 aaKnown RBP29.62■■■□□ 2.33
RNF38-208ENST00000488058 SIL1Q9H173 461 aa29.62■■■□□ 2.33
RNF38-208ENST00000488058 GRM1Q13255 1194 aa29.61■■■□□ 2.33
RNF38-208ENST00000488058 F8W031 263 aaPredicted RBP29.6■■■□□ 2.33
RNF38-208ENST00000488058 VPS37DQ86XT2 251 aa29.6■■■□□ 2.33
RNF38-208ENST00000488058 CERS5Q8N5B7 392 aa29.6■■■□□ 2.33
RNF38-208ENST00000488058 VGLL2Q8N8G2 317 aa29.6■■■□□ 2.33
RNF38-208ENST00000488058 FAM84BQ96KN1 310 aaPredicted RBP29.6■■■□□ 2.33
RNF38-208ENST00000488058 TLL2Q9Y6L7 1015 aa29.6■■■□□ 2.33
RNF38-208ENST00000488058 SASH1O94885 1247 aa29.59■■■□□ 2.33
RNF38-208ENST00000488058 NBPF9Q3BBW0 867 aa29.59■■■□□ 2.33
RNF38-208ENST00000488058 CAVIN4Q5BKX8 364 aa29.58■■■□□ 2.33
RNF38-208ENST00000488058 TMEM57Q8N5G2 664 aa29.58■■■□□ 2.33
RNF38-208ENST00000488058 IQSEC3Q9UPP2 1182 aaPredicted RBP29.58■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms