RNA–Protein interactions for RNA: ENST00000487538.1

GTPBP1-211, Transcript of GTP binding protein 1, humanhuman

TSL 3

Gene GTPBP1, Length 358 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTPBP1-211ENST00000487538 PUM3Q15397 648 aaKnown RBP12.51□□□□□ -0.41
GTPBP1-211ENST00000487538 DDX46Q7L014 1031 aaKnown RBP12.51□□□□□ -0.41
GTPBP1-211ENST00000487538 NLGN1Q8N2Q7 840 aa12.51□□□□□ -0.41
GTPBP1-211ENST00000487538 SEC31BQ9NQW1 1179 aa12.51□□□□□ -0.41
GTPBP1-211ENST00000487538 PALD1Q9ULE6 856 aa12.51□□□□□ -0.41
GTPBP1-211ENST00000487538 CCDC171Q6TFL3 1326 aa12.51□□□□□ -0.41
GTPBP1-211ENST00000487538 ARAP2Q8WZ64 1704 aa12.51□□□□□ -0.41
GTPBP1-211ENST00000487538 ARFGEF1Q9Y6D6 1849 aa12.51□□□□□ -0.41
GTPBP1-211ENST00000487538 CD2BP2O95400 341 aaKnown RBP12.5□□□□□ -0.41
GTPBP1-211ENST00000487538 ZNF784Q8NCA9 323 aaPredicted RBP12.5□□□□□ -0.41
GTPBP1-211ENST00000487538 ZNF512BQ96KM6 892 aaPredicted RBP12.5□□□□□ -0.41
GTPBP1-211ENST00000487538 SLKQ9H2G2 1235 aaPredicted RBP12.5□□□□□ -0.41
GTPBP1-211ENST00000487538 NDUFB9Q9Y6M9 179 aa12.5□□□□□ -0.41
GTPBP1-211ENST00000487538 COL11A2P13942 1736 aaPredicted RBP12.5□□□□□ -0.41
GTPBP1-211ENST00000487538 CARMIL3Q8ND23 1372 aa12.49□□□□□ -0.41
GTPBP1-211ENST00000487538 SLC5A1P13866 664 aa12.49□□□□□ -0.41
GTPBP1-211ENST00000487538 PTH1RQ03431 593 aa12.49□□□□□ -0.41
GTPBP1-211ENST00000487538 LRRFIP1Q32MZ4 808 aaKnown RBP12.49□□□□□ -0.41
GTPBP1-211ENST00000487538 TPTE2Q6XPS3 522 aa12.49□□□□□ -0.41
GTPBP1-211ENST00000487538 LPIN2Q92539 896 aa12.49□□□□□ -0.41
GTPBP1-211ENST00000487538 ANTXR1Q9H6X2 564 aa12.49□□□□□ -0.41
GTPBP1-211ENST00000487538 ANKRD31Q8N7Z5 1873 aa12.48□□□□□ -0.41
GTPBP1-211ENST00000487538 POLRMTO00411 1230 aaKnown RBP12.48□□□□□ -0.41
GTPBP1-211ENST00000487538 UQCRFS1P1P0C7P4 283 aa12.48□□□□□ -0.41
GTPBP1-211ENST00000487538 FGFR2P21802 821 aa12.48□□□□□ -0.41
GTPBP1-211ENST00000487538 MCM2P49736 904 aa12.48□□□□□ -0.41
GTPBP1-211ENST00000487538 C3orf67Q6ZVT6 689 aa12.48□□□□□ -0.41
GTPBP1-211ENST00000487538 ANKRD18AQ8IVF6 992 aa12.48□□□□□ -0.41
GTPBP1-211ENST00000487538 SPRYD3Q8NCJ5 442 aa12.48□□□□□ -0.41
GTPBP1-211ENST00000487538 KCNB2Q92953 911 aa12.48□□□□□ -0.41
GTPBP1-211ENST00000487538 NLRP3Q96P20 1036 aa12.48□□□□□ -0.41
GTPBP1-211ENST00000487538 HSP90AA1P07900 732 aaKnown RBP12.47□□□□□ -0.41
GTPBP1-211ENST00000487538 KCNJ4P48050 445 aa12.47□□□□□ -0.41
GTPBP1-211ENST00000487538 NEK4P51957 841 aa12.47□□□□□ -0.41
GTPBP1-211ENST00000487538 FKBP4Q02790 459 aaKnown RBP eCLIP12.47□□□□□ -0.41
GTPBP1-211ENST00000487538 NFIXQ14938 502 aa12.47□□□□□ -0.41
GTPBP1-211ENST00000487538 MCMDC2Q4G0Z9 681 aa12.47□□□□□ -0.41
GTPBP1-211ENST00000487538 HELBQ8NG08 1087 aaPredicted RBP12.47□□□□□ -0.41
GTPBP1-211ENST00000487538 MAP4K1Q92918 833 aa12.47□□□□□ -0.41
GTPBP1-211ENST00000487538 HELLSQ9NRZ9 838 aa12.47□□□□□ -0.41
GTPBP1-211ENST00000487538 WWC3Q9ULE0 1092 aa12.47□□□□□ -0.41
GTPBP1-211ENST00000487538 RBM8AQ9Y5S9 174 aaKnown RBP12.47□□□□□ -0.41
GTPBP1-211ENST00000487538 SNX14Q9Y5W7 946 aa12.47□□□□□ -0.41
GTPBP1-211ENST00000487538 NPHP1O15259 732 aa12.46□□□□□ -0.41
GTPBP1-211ENST00000487538 RNF113AO15541 343 aaKnown RBP12.46□□□□□ -0.41
GTPBP1-211ENST00000487538 GRIN3BO60391 1043 aa12.46□□□□□ -0.41
GTPBP1-211ENST00000487538 TAF5LO75529 589 aa12.46□□□□□ -0.41
GTPBP1-211ENST00000487538 ZFYP08048 801 aaPredicted RBP12.46□□□□□ -0.41
GTPBP1-211ENST00000487538 ARID4AP29374 1257 aaPredicted RBP12.46□□□□□ -0.41
GTPBP1-211ENST00000487538 TM4SF1P30408 202 aa12.46□□□□□ -0.41
GTPBP1-211ENST00000487538 CHRNDQ07001 517 aa12.46□□□□□ -0.41
GTPBP1-211ENST00000487538 SCARF1Q14162 830 aa12.46□□□□□ -0.41
GTPBP1-211ENST00000487538 ZMYM1Q5SVZ6 1142 aa12.46□□□□□ -0.41
GTPBP1-211ENST00000487538 ZNF589Q86UQ0 364 aaPredicted RBP12.46□□□□□ -0.41
GTPBP1-211ENST00000487538 CHMP5Q9NZZ3 219 aa12.46□□□□□ -0.41
GTPBP1-211ENST00000487538 PARP3Q9Y6F1 533 aa12.46□□□□□ -0.41
GTPBP1-211ENST00000487538 COL4A1P02462 1669 aa12.45□□□□□ -0.42
GTPBP1-211ENST00000487538 ZKSCAN1P17029 563 aaPredicted RBP12.45□□□□□ -0.42
GTPBP1-211ENST00000487538 KCNA3P22001 575 aa12.45□□□□□ -0.42
GTPBP1-211ENST00000487538 MCAMP43121 646 aa12.45□□□□□ -0.42
GTPBP1-211ENST00000487538 ZAP70P43403 619 aa12.45□□□□□ -0.42
GTPBP1-211ENST00000487538 PHKA1P46020 1223 aa12.45□□□□□ -0.42
GTPBP1-211ENST00000487538 TGFB2P61812 414 aa12.45□□□□□ -0.42
GTPBP1-211ENST00000487538 NECTIN1Q15223 517 aa12.45□□□□□ -0.42
GTPBP1-211ENST00000487538 TTF1Q15361 905 aaPredicted RBP12.45□□□□□ -0.42
GTPBP1-211ENST00000487538 RNF20Q5VTR2 975 aa12.45□□□□□ -0.42
GTPBP1-211ENST00000487538 CREB3L3Q68CJ9 461 aa12.45□□□□□ -0.42
GTPBP1-211ENST00000487538 CCDC102BQ68D86 513 aa12.45□□□□□ -0.42
GTPBP1-211ENST00000487538 PRPF40BQ6NWY9 871 aaKnown RBP12.45□□□□□ -0.42
GTPBP1-211ENST00000487538 RASEFQ8IZ41 740 aa12.45□□□□□ -0.42
GTPBP1-211ENST00000487538 CNBD1Q8NA66 436 aa12.45□□□□□ -0.42
GTPBP1-211ENST00000487538 BSDC1Q9NW68 430 aaPredicted RBP12.45□□□□□ -0.42
GTPBP1-211ENST00000487538 CIZ1Q9ULV3 898 aaPredicted RBP12.45□□□□□ -0.42
GTPBP1-211ENST00000487538 TNRC6CQ9HCJ0 1690 aaKnown RBP12.45□□□□□ -0.42
GTPBP1-211ENST00000487538 DDIT3P35638 169 aa12.44□□□□□ -0.42
GTPBP1-211ENST00000487538 NBR1Q14596 966 aa12.44□□□□□ -0.42
GTPBP1-211ENST00000487538 ZSCAN25Q6NSZ9 544 aa12.44□□□□□ -0.42
GTPBP1-211ENST00000487538 TM6SF1Q9BZW5 370 aa12.44□□□□□ -0.42
GTPBP1-211ENST00000487538 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.44□□□□□ -0.42
GTPBP1-211ENST00000487538 HMG20BQ9P0W2 317 aa12.44□□□□□ -0.42
GTPBP1-211ENST00000487538 U3KPZ7 1027 aaPredicted RBP12.44□□□□□ -0.42
GTPBP1-211ENST00000487538 A0A1B0GUL6 1792 aa12.43□□□□□ -0.42
GTPBP1-211ENST00000487538 MAST3O60307 1309 aa12.43□□□□□ -0.42
GTPBP1-211ENST00000487538 A0A0G2JLW4 131 aa12.43□□□□□ -0.42
GTPBP1-211ENST00000487538 SLC27A2O14975 620 aa12.43□□□□□ -0.42
GTPBP1-211ENST00000487538 DPEP1P16444 411 aa12.43□□□□□ -0.42
GTPBP1-211ENST00000487538 RPS8P62241 208 aaKnown RBP12.43□□□□□ -0.42
GTPBP1-211ENST00000487538 PI16Q6UXB8 463 aa12.43□□□□□ -0.42
GTPBP1-211ENST00000487538 CCDC129Q6ZRS4 1044 aa12.43□□□□□ -0.42
GTPBP1-211ENST00000487538 CELF1Q92879 486 aaKnown RBP12.43□□□□□ -0.42
GTPBP1-211ENST00000487538 SEC62Q99442 399 aaKnown RBP12.43□□□□□ -0.42
GTPBP1-211ENST00000487538 UPF3BQ9BZI7 483 aaKnown RBP12.43□□□□□ -0.42
GTPBP1-211ENST00000487538 CHGBP05060 677 aa12.42□□□□□ -0.42
GTPBP1-211ENST00000487538 PSMA5P28066 241 aa12.42□□□□□ -0.42
GTPBP1-211ENST00000487538 ST5P78524 1137 aa12.42□□□□□ -0.42
GTPBP1-211ENST00000487538 UBE4AQ14139 1066 aa12.42□□□□□ -0.42
GTPBP1-211ENST00000487538 CCDC24Q8N4L8 307 aa12.42□□□□□ -0.42
GTPBP1-211ENST00000487538 SPATA5Q8NB90 893 aa12.42□□□□□ -0.42
GTPBP1-211ENST00000487538 APPBP2Q92624 585 aa12.42□□□□□ -0.42
GTPBP1-211ENST00000487538 JAKMIP1Q96N16 626 aaKnown RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms