RNA–Protein interactions for RNA: ENST00000487252.1

TRIM56-204, Transcript of tripartite motif containing 56, humanhuman

TSL 3

Gene TRIM56, Length 735 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-204ENST00000487252 HTATSF1O43719 755 aaKnown RBP15.57■□□□□ 0.08
TRIM56-204ENST00000487252 PRKAR2BP31323 418 aa15.57■□□□□ 0.08
TRIM56-204ENST00000487252 DCTN1Q14203 1278 aa15.57■□□□□ 0.08
TRIM56-204ENST00000487252 Q7L0L9 218 aa15.57■□□□□ 0.08
TRIM56-204ENST00000487252 RTF1Q92541 710 aaKnown RBP15.57■□□□□ 0.08
TRIM56-204ENST00000487252 CLMNQ96JQ2 1002 aa15.57■□□□□ 0.08
TRIM56-204ENST00000487252 EYSQ5T1H1 3165 aa15.57■□□□□ 0.08
TRIM56-204ENST00000487252 GJA5P36382 358 aa15.56■□□□□ 0.08
TRIM56-204ENST00000487252 EIF4A1P60842 406 aaKnown RBP15.56■□□□□ 0.08
TRIM56-204ENST00000487252 MIS18AQ9NYP9 233 aa15.56■□□□□ 0.08
TRIM56-204ENST00000487252 FZD1Q9UP38 647 aa15.56■□□□□ 0.08
TRIM56-204ENST00000487252 SSC5DA1L4H1 1573 aa15.56■□□□□ 0.08
TRIM56-204ENST00000487252 COL1A1P02452 1464 aaPredicted RBP15.55■□□□□ 0.08
TRIM56-204ENST00000487252 USP17L3A6NCW0 530 aa15.55■□□□□ 0.08
TRIM56-204ENST00000487252 USP17L4A6NCW7 530 aa15.55■□□□□ 0.08
TRIM56-204ENST00000487252 BMP8BP34820 402 aa15.55■□□□□ 0.08
TRIM56-204ENST00000487252 GJA8P48165 433 aa15.55■□□□□ 0.08
TRIM56-204ENST00000487252 PDIA6Q15084 440 aa15.55■□□□□ 0.08
TRIM56-204ENST00000487252 MTFR1Q15390 333 aa15.55■□□□□ 0.08
TRIM56-204ENST00000487252 USP17L1Q7RTZ2 530 aa15.55■□□□□ 0.08
TRIM56-204ENST00000487252 NKX2-3Q8TAU0 364 aa15.55■□□□□ 0.08
TRIM56-204ENST00000487252 TRMT112Q9UI30 125 aaKnown RBP15.55■□□□□ 0.08
TRIM56-204ENST00000487252 ZSWIM8A7E2V4 1837 aa15.54■□□□□ 0.08
TRIM56-204ENST00000487252 TTC28Q96AY4 2481 aa15.54■□□□□ 0.08
TRIM56-204ENST00000487252 PODNQ7Z5L7 613 aa15.54■□□□□ 0.08
TRIM56-204ENST00000487252 APOBEC3FQ8IUX4 373 aaKnown RBP15.54■□□□□ 0.08
TRIM56-204ENST00000487252 STAP2Q9UGK3 403 aa15.54■□□□□ 0.08
TRIM56-204ENST00000487252 LRIT3Q3SXY7 679 aa15.53■□□□□ 0.08
TRIM56-204ENST00000487252 HSP90AB3PQ58FF7 597 aa15.53■□□□□ 0.08
TRIM56-204ENST00000487252 ZBED3Q96IU2 234 aaPredicted RBP15.53■□□□□ 0.08
TRIM56-204ENST00000487252 MS4A4AQ96JQ5 239 aa15.53■□□□□ 0.08
TRIM56-204ENST00000487252 GDF15Q99988 308 aa15.53■□□□□ 0.08
TRIM56-204ENST00000487252 UFL1O94874 794 aa15.52■□□□□ 0.08
TRIM56-204ENST00000487252 GNRH1P01148 92 aa15.52■□□□□ 0.08
TRIM56-204ENST00000487252 GJB1P08034 283 aa15.52■□□□□ 0.08
TRIM56-204ENST00000487252 MMP14P50281 582 aa15.52■□□□□ 0.08
TRIM56-204ENST00000487252 RPS8P62241 208 aaKnown RBP15.52■□□□□ 0.08
TRIM56-204ENST00000487252 PRUNE2Q8WUY3 3088 aa15.51■□□□□ 0.07
TRIM56-204ENST00000487252 G3V3G9 751 aa15.51■□□□□ 0.07
TRIM56-204ENST00000487252 PRMT2P55345 433 aa15.51■□□□□ 0.07
TRIM56-204ENST00000487252 DACT2Q5SW24 774 aa15.51■□□□□ 0.07
TRIM56-204ENST00000487252 DCAF8Q5TAQ9 597 aa15.51■□□□□ 0.07
TRIM56-204ENST00000487252 THUMPD2Q9BTF0 503 aaKnown RBP15.51■□□□□ 0.07
TRIM56-204ENST00000487252 SASH1O94885 1247 aa15.5■□□□□ 0.07
TRIM56-204ENST00000487252 OGFOD1Q8N543 542 aa15.5■□□□□ 0.07
TRIM56-204ENST00000487252 PNISRQ8TF01 805 aaKnown RBP15.5■□□□□ 0.07
TRIM56-204ENST00000487252 ARHGAP39Q9C0H5 1083 aa15.5■□□□□ 0.07
TRIM56-204ENST00000487252 DEFB129Q9H1M3 183 aa15.5■□□□□ 0.07
TRIM56-204ENST00000487252 GGA1Q9UJY5 639 aa15.5■□□□□ 0.07
TRIM56-204ENST00000487252 ALPK3Q96L96 1907 aa15.5■□□□□ 0.07
TRIM56-204ENST00000487252 PPP1R12BO60237 982 aaPredicted RBP15.49■□□□□ 0.07
TRIM56-204ENST00000487252 COL9A1P20849 921 aa15.49■□□□□ 0.07
TRIM56-204ENST00000487252 LACTBP83111 547 aaPredicted RBP15.49■□□□□ 0.07
TRIM56-204ENST00000487252 PROSER3Q2NL68 480 aa15.49■□□□□ 0.07
TRIM56-204ENST00000487252 ZFYVE28Q9HCC9 887 aa15.49■□□□□ 0.07
TRIM56-204ENST00000487252 MYO3BQ8WXR4 1341 aa15.48■□□□□ 0.07
TRIM56-204ENST00000487252 OTOFQ9HC10 1997 aa15.48■□□□□ 0.07
TRIM56-204ENST00000487252 PER1O15534 1290 aaPredicted RBP15.48■□□□□ 0.07
TRIM56-204ENST00000487252 MXD3Q9BW11 206 aa15.48■□□□□ 0.07
TRIM56-204ENST00000487252 LAMA2P24043 3122 aaKnown RBP15.48■□□□□ 0.07
TRIM56-204ENST00000487252 EVI5O60447 810 aa15.47■□□□□ 0.07
TRIM56-204ENST00000487252 FARP2O94887 1054 aaPredicted RBP15.47■□□□□ 0.07
TRIM56-204ENST00000487252 TAF1CQ15572 869 aaPredicted RBP15.47■□□□□ 0.07
TRIM56-204ENST00000487252 BRI3BPQ8WY22 251 aa15.47■□□□□ 0.07
TRIM56-204ENST00000487252 ANKIB1Q9P2G1 1089 aa15.47■□□□□ 0.07
TRIM56-204ENST00000487252 PPP2R3BQ9Y5P8 575 aa15.47■□□□□ 0.07
TRIM56-204ENST00000487252 ECM29Q5VYK3 1845 aa15.46■□□□□ 0.07
TRIM56-204ENST00000487252 USP2O75604 605 aaPredicted RBP15.46■□□□□ 0.07
TRIM56-204ENST00000487252 CCL5P13501 91 aa15.46■□□□□ 0.07
TRIM56-204ENST00000487252 RPTORQ8N122 1335 aa15.45■□□□□ 0.06
TRIM56-204ENST00000487252 TLR2O60603 784 aa15.45■□□□□ 0.06
TRIM56-204ENST00000487252 BCAMP50895 628 aa15.45■□□□□ 0.06
TRIM56-204ENST00000487252 STRIP1Q5VSL9 837 aa15.45■□□□□ 0.06
TRIM56-204ENST00000487252 COPS6Q7L5N1 327 aa15.45■□□□□ 0.06
TRIM56-204ENST00000487252 ANKRD13AQ8IZ07 590 aa15.45■□□□□ 0.06
TRIM56-204ENST00000487252 FAM43AQ8N2R8 423 aa15.45■□□□□ 0.06
TRIM56-204ENST00000487252 U2AF1L4Q8WU68 220 aaKnown RBP15.45■□□□□ 0.06
TRIM56-204ENST00000487252 FAM89AQ96GI7 184 aa15.45■□□□□ 0.06
TRIM56-204ENST00000487252 DLG5Q8TDM6 1919 aa15.45■□□□□ 0.06
TRIM56-204ENST00000487252 ANXA1P04083 346 aa15.44■□□□□ 0.06
TRIM56-204ENST00000487252 IREB2P48200 963 aaKnown RBP15.44■□□□□ 0.06
TRIM56-204ENST00000487252 KIF22Q14807 665 aa15.44■□□□□ 0.06
TRIM56-204ENST00000487252 OPTNQ96CV9 577 aa15.44■□□□□ 0.06
TRIM56-204ENST00000487252 GUCD1Q96NT3 240 aa15.44■□□□□ 0.06
TRIM56-204ENST00000487252 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.44■□□□□ 0.06
TRIM56-204ENST00000487252 XDHP47989 1333 aa15.43■□□□□ 0.06
TRIM56-204ENST00000487252 CAPN2P17655 700 aa15.43■□□□□ 0.06
TRIM56-204ENST00000487252 CTGFP29279 349 aa15.43■□□□□ 0.06
TRIM56-204ENST00000487252 GRK4P32298 578 aa15.43■□□□□ 0.06
TRIM56-204ENST00000487252 PLA2G5P39877 138 aa15.43■□□□□ 0.06
TRIM56-204ENST00000487252 SUPT20HL1Q3ZLR7 823 aa15.43■□□□□ 0.06
TRIM56-204ENST00000487252 CC2D1BQ5T0F9 858 aaKnown RBP15.43■□□□□ 0.06
TRIM56-204ENST00000487252 FAM109BQ6ICB4 259 aaPredicted RBP15.43■□□□□ 0.06
TRIM56-204ENST00000487252 ISCA1Q9BUE6 129 aa15.43■□□□□ 0.06
TRIM56-204ENST00000487252 RNF208Q9H0X6 261 aa15.43■□□□□ 0.06
TRIM56-204ENST00000487252 SRRDQ9UH36 339 aa15.43■□□□□ 0.06
TRIM56-204ENST00000487252 MED23Q9ULK4 1368 aa15.43■□□□□ 0.06
TRIM56-204ENST00000487252 ZNF804BA4D1E1 1349 aa15.43■□□□□ 0.06
TRIM56-204ENST00000487252 CCL15-CCL14A0A0B4J2E2 113 aa15.42■□□□□ 0.06
TRIM56-204ENST00000487252 POTEB2H3BUK9 544 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms