RNA–Protein interactions for RNA: ENST00000487194.1

VAMP3-203, Transcript of vesicle associated membrane protein 3, humanhuman

TSL 4

Gene VAMP3, Length 274 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-203ENST00000487194 HELLSQ9NRZ9 838 aa7.42□□□□□ -1.22
VAMP3-203ENST00000487194 GNL3LQ9NVN8 582 aaKnown RBP7.42□□□□□ -1.22
VAMP3-203ENST00000487194 MINPP1Q9UNW1 487 aa7.42□□□□□ -1.22
VAMP3-203ENST00000487194 PARP3Q9Y6F1 533 aa7.42□□□□□ -1.22
VAMP3-203ENST00000487194 PNPLA7Q6ZV29 1317 aa7.42□□□□□ -1.22
VAMP3-203ENST00000487194 ARAP2Q8WZ64 1704 aa7.41□□□□□ -1.22
VAMP3-203ENST00000487194 ZBTB22O15209 634 aa7.41□□□□□ -1.22
VAMP3-203ENST00000487194 RNF113AO15541 343 aaKnown RBP7.41□□□□□ -1.22
VAMP3-203ENST00000487194 ST18O60284 1047 aa7.41□□□□□ -1.22
VAMP3-203ENST00000487194 BBOX1O75936 387 aa7.41□□□□□ -1.22
VAMP3-203ENST00000487194 HOXA10P31260 410 aaPredicted RBP7.41□□□□□ -1.22
VAMP3-203ENST00000487194 HSPA4P34932 840 aa7.41□□□□□ -1.22
VAMP3-203ENST00000487194 CAVIN4Q5BKX8 364 aa7.41□□□□□ -1.22
VAMP3-203ENST00000487194 RNF20Q5VTR2 975 aa7.41□□□□□ -1.22
VAMP3-203ENST00000487194 CCDC24Q8N4L8 307 aa7.41□□□□□ -1.22
VAMP3-203ENST00000487194 EDC3Q96F86 508 aaKnown RBP7.41□□□□□ -1.22
VAMP3-203ENST00000487194 FAM227BQ96M60 508 aa7.41□□□□□ -1.22
VAMP3-203ENST00000487194 KIF2CQ99661 725 aa7.41□□□□□ -1.22
VAMP3-203ENST00000487194 CCDC171Q6TFL3 1326 aa7.41□□□□□ -1.22
VAMP3-203ENST00000487194 MED23Q9ULK4 1368 aa7.41□□□□□ -1.22
VAMP3-203ENST00000487194 A0A0D9SFI3 127 aa7.4□□□□□ -1.22
VAMP3-203ENST00000487194 SEMA3EO15041 775 aa7.4□□□□□ -1.22
VAMP3-203ENST00000487194 PDE6BP35913 854 aa7.4□□□□□ -1.22
VAMP3-203ENST00000487194 MCAMP43121 646 aa7.4□□□□□ -1.22
VAMP3-203ENST00000487194 ZAP70P43403 619 aa7.4□□□□□ -1.22
VAMP3-203ENST00000487194 PHKA1P46020 1223 aa7.4□□□□□ -1.22
VAMP3-203ENST00000487194 ZMYM1Q5SVZ6 1142 aa7.4□□□□□ -1.22
VAMP3-203ENST00000487194 VPS37DQ86XT2 251 aa7.4□□□□□ -1.22
VAMP3-203ENST00000487194 SPATA5Q8NB90 893 aa7.4□□□□□ -1.22
VAMP3-203ENST00000487194 MAP4K1Q92918 833 aa7.4□□□□□ -1.22
VAMP3-203ENST00000487194 CRAMP1Q96RY5 1269 aa7.4□□□□□ -1.22
VAMP3-203ENST00000487194 TBC1D2Q9BYX2 928 aa7.4□□□□□ -1.22
VAMP3-203ENST00000487194 IL25Q9H293 177 aa7.4□□□□□ -1.22
VAMP3-203ENST00000487194 LEMD3Q9Y2U8 911 aa7.4□□□□□ -1.22
VAMP3-203ENST00000487194 NDUFB9Q9Y6M9 179 aa7.4□□□□□ -1.22
VAMP3-203ENST00000487194 TNRC6CQ9HCJ0 1690 aaKnown RBP7.4□□□□□ -1.23
VAMP3-203ENST00000487194 CASZ1Q86V15 1759 aa7.4□□□□□ -1.23
VAMP3-203ENST00000487194 QSER1Q2KHR3 1735 aa7.39□□□□□ -1.23
VAMP3-203ENST00000487194 ZNF804BA4D1E1 1349 aa7.39□□□□□ -1.23
VAMP3-203ENST00000487194 XDHP47989 1333 aa7.39□□□□□ -1.23
VAMP3-203ENST00000487194 PDS5AQ29RF7 1337 aaKnown RBP7.39□□□□□ -1.23
VAMP3-203ENST00000487194 IGSF3O75054 1194 aa7.39□□□□□ -1.23
VAMP3-203ENST00000487194 MMP10P09238 476 aa7.39□□□□□ -1.23
VAMP3-203ENST00000487194 ZKSCAN1P17029 563 aaPredicted RBP7.39□□□□□ -1.23
VAMP3-203ENST00000487194 ALDH1B1P30837 517 aa7.39□□□□□ -1.23
VAMP3-203ENST00000487194 MCM2P49736 904 aa7.39□□□□□ -1.23
VAMP3-203ENST00000487194 BCAMP50895 628 aa7.39□□□□□ -1.23
VAMP3-203ENST00000487194 MAP3K12Q12852 859 aa7.39□□□□□ -1.23
VAMP3-203ENST00000487194 SCARF1Q14162 830 aa7.39□□□□□ -1.23
VAMP3-203ENST00000487194 UBE3CQ15386 1083 aa7.39□□□□□ -1.23
VAMP3-203ENST00000487194 APPBP2Q92624 585 aa7.39□□□□□ -1.23
VAMP3-203ENST00000487194 KCNB2Q92953 911 aa7.39□□□□□ -1.23
VAMP3-203ENST00000487194 ANTXR1Q9H6X2 564 aa7.39□□□□□ -1.23
VAMP3-203ENST00000487194 HMG20BQ9P0W2 317 aa7.39□□□□□ -1.23
VAMP3-203ENST00000487194 ANKIB1Q9P2G1 1089 aa7.39□□□□□ -1.23
VAMP3-203ENST00000487194 DENND2AQ9ULE3 1009 aa7.39□□□□□ -1.23
VAMP3-203ENST00000487194 U3KPZ7 1027 aaPredicted RBP7.39□□□□□ -1.23
VAMP3-203ENST00000487194 NRXN2Q9P2S2 1712 aa7.38□□□□□ -1.23
VAMP3-203ENST00000487194 K7ELQ4 463 aaPredicted RBP7.38□□□□□ -1.23
VAMP3-203ENST00000487194 CYP2E1P05181 493 aaPredicted RBP7.38□□□□□ -1.23
VAMP3-203ENST00000487194 NPR1P16066 1061 aa7.38□□□□□ -1.23
VAMP3-203ENST00000487194 ATP2B4P23634 1241 aa7.38□□□□□ -1.23
VAMP3-203ENST00000487194 PSMA5P28066 241 aa7.38□□□□□ -1.23
VAMP3-203ENST00000487194 HIBADHP31937 336 aaKnown RBP7.38□□□□□ -1.23
VAMP3-203ENST00000487194 PTH1RQ03431 593 aa7.38□□□□□ -1.23
VAMP3-203ENST00000487194 RASGRF1Q13972 1273 aa7.38□□□□□ -1.23
VAMP3-203ENST00000487194 KRT32Q14532 448 aa7.38□□□□□ -1.23
VAMP3-203ENST00000487194 WASHC4Q2M389 1173 aa7.38□□□□□ -1.23
VAMP3-203ENST00000487194 SLC9C2Q5TAH2 1124 aa7.38□□□□□ -1.23
VAMP3-203ENST00000487194 TMED8Q6PL24 325 aaPredicted RBP7.38□□□□□ -1.23
VAMP3-203ENST00000487194 C15orf52Q6ZUT6 534 aaKnown RBP7.38□□□□□ -1.23
VAMP3-203ENST00000487194 FBXO33Q7Z6M2 555 aa7.38□□□□□ -1.23
VAMP3-203ENST00000487194 SLC16A10Q8TF71 515 aa7.38□□□□□ -1.23
VAMP3-203ENST00000487194 MASTLQ96GX5 879 aa7.38□□□□□ -1.23
VAMP3-203ENST00000487194 FAM84BQ96KN1 310 aaPredicted RBP7.38□□□□□ -1.23
VAMP3-203ENST00000487194 DSCC1Q9BVC3 393 aa7.38□□□□□ -1.23
VAMP3-203ENST00000487194 TM6SF1Q9BZW5 370 aa7.38□□□□□ -1.23
VAMP3-203ENST00000487194 TMX4Q9H1E5 349 aaPredicted RBP7.38□□□□□ -1.23
VAMP3-203ENST00000487194 ANO8Q9HCE9 1232 aaPredicted RBP7.38□□□□□ -1.23
VAMP3-203ENST00000487194 RBM8AQ9Y5S9 174 aaKnown RBP7.38□□□□□ -1.23
VAMP3-203ENST00000487194 SNX14Q9Y5W7 946 aa7.38□□□□□ -1.23
VAMP3-203ENST00000487194 AKAP11Q9UKA4 1901 aa7.38□□□□□ -1.23
VAMP3-203ENST00000487194 A0A1B0GUL6 1792 aa7.38□□□□□ -1.23
VAMP3-203ENST00000487194 MAST3O60307 1309 aa7.37□□□□□ -1.23
VAMP3-203ENST00000487194 SNAP23O00161 211 aa7.37□□□□□ -1.23
VAMP3-203ENST00000487194 FRAT2O75474 233 aaPredicted RBP7.37□□□□□ -1.23
VAMP3-203ENST00000487194 IDH1O75874 414 aaKnown RBP7.37□□□□□ -1.23
VAMP3-203ENST00000487194 SRGNP10124 158 aa7.37□□□□□ -1.23
VAMP3-203ENST00000487194 ADD2P35612 726 aa7.37□□□□□ -1.23
VAMP3-203ENST00000487194 GYG1P46976 350 aa7.37□□□□□ -1.23
VAMP3-203ENST00000487194 SLC4A3P48751 1232 aa7.37□□□□□ -1.23
VAMP3-203ENST00000487194 NEK4P51957 841 aa7.37□□□□□ -1.23
VAMP3-203ENST00000487194 NECTIN1Q15223 517 aa7.37□□□□□ -1.23
VAMP3-203ENST00000487194 TSGA10IPQ3SY00 556 aa7.37□□□□□ -1.23
VAMP3-203ENST00000487194 CREB3L3Q68CJ9 461 aa7.37□□□□□ -1.23
VAMP3-203ENST00000487194 PRPF40BQ6NWY9 871 aaKnown RBP7.37□□□□□ -1.23
VAMP3-203ENST00000487194 PI16Q6UXB8 463 aa7.37□□□□□ -1.23
VAMP3-203ENST00000487194 ZNF804AQ7Z570 1209 aa7.37□□□□□ -1.23
VAMP3-203ENST00000487194 DEFB132Q7Z7B7 95 aa7.37□□□□□ -1.23
VAMP3-203ENST00000487194 ZNF589Q86UQ0 364 aaPredicted RBP7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms