RNA–Protein interactions for RNA: ENST00000487118.1

NUDCD3-209, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 314 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-209ENST00000487118 MSL1Q68DK7 614 aa10.43□□□□□ -0.74
NUDCD3-209ENST00000487118 LPIN2Q92539 896 aa10.43□□□□□ -0.74
NUDCD3-209ENST00000487118 CELF1Q92879 486 aaKnown RBP10.43□□□□□ -0.74
NUDCD3-209ENST00000487118 SNRKQ9NRH2 765 aa10.43□□□□□ -0.74
NUDCD3-209ENST00000487118 RAD50Q92878 1312 aa10.42□□□□□ -0.74
NUDCD3-209ENST00000487118 KLRG2A4D1S0 409 aaPredicted RBP10.42□□□□□ -0.74
NUDCD3-209ENST00000487118 MSH5O43196 834 aa10.42□□□□□ -0.74
NUDCD3-209ENST00000487118 IFIT1P09914 478 aaKnown RBP10.42□□□□□ -0.74
NUDCD3-209ENST00000487118 SLC5A1P13866 664 aa10.42□□□□□ -0.74
NUDCD3-209ENST00000487118 POLD1P28340 1107 aa10.42□□□□□ -0.74
NUDCD3-209ENST00000487118 RPS8P62241 208 aaKnown RBP10.42□□□□□ -0.74
NUDCD3-209ENST00000487118 TTC39AQ5SRH9 613 aa10.42□□□□□ -0.74
NUDCD3-209ENST00000487118 DDX46Q7L014 1031 aaKnown RBP10.42□□□□□ -0.74
NUDCD3-209ENST00000487118 CCDC24Q8N4L8 307 aa10.42□□□□□ -0.74
NUDCD3-209ENST00000487118 KBTBD3Q8NAB2 608 aa10.42□□□□□ -0.74
NUDCD3-209ENST00000487118 RUFY2Q8WXA3 655 aa10.42□□□□□ -0.74
NUDCD3-209ENST00000487118 EDC3Q96F86 508 aaKnown RBP10.42□□□□□ -0.74
NUDCD3-209ENST00000487118 KIF2CQ99661 725 aa10.42□□□□□ -0.74
NUDCD3-209ENST00000487118 IL25Q9H293 177 aa10.42□□□□□ -0.74
NUDCD3-209ENST00000487118 DIAPH3Q9NSV4 1193 aa10.42□□□□□ -0.74
NUDCD3-209ENST00000487118 NPHP1O15259 732 aa10.41□□□□□ -0.74
NUDCD3-209ENST00000487118 UQCRFS1P1P0C7P4 283 aa10.41□□□□□ -0.74
NUDCD3-209ENST00000487118 ARID4AP29374 1257 aaPredicted RBP10.41□□□□□ -0.74
NUDCD3-209ENST00000487118 GRAPQ13588 217 aa10.41□□□□□ -0.74
NUDCD3-209ENST00000487118 UBE4AQ14139 1066 aa10.41□□□□□ -0.74
NUDCD3-209ENST00000487118 GORABQ5T7V8 394 aa10.41□□□□□ -0.74
NUDCD3-209ENST00000487118 HELBQ8NG08 1087 aaPredicted RBP10.41□□□□□ -0.74
NUDCD3-209ENST00000487118 GRAPLQ8TC17 118 aaPredicted RBP10.41□□□□□ -0.74
NUDCD3-209ENST00000487118 SLC16A10Q8TF71 515 aa10.41□□□□□ -0.74
NUDCD3-209ENST00000487118 IL17RAQ96F46 866 aa10.41□□□□□ -0.74
NUDCD3-209ENST00000487118 DNAJC2Q99543 621 aaKnown RBP10.41□□□□□ -0.74
NUDCD3-209ENST00000487118 FSD1Q9BTV5 496 aa10.41□□□□□ -0.74
NUDCD3-209ENST00000487118 PAG1Q9NWQ8 432 aa10.41□□□□□ -0.74
NUDCD3-209ENST00000487118 MINPP1Q9UNW1 487 aa10.41□□□□□ -0.74
NUDCD3-209ENST00000487118 TAF1P21675 1872 aa10.4□□□□□ -0.74
NUDCD3-209ENST00000487118 ANKRD31Q8N7Z5 1873 aa10.4□□□□□ -0.74
NUDCD3-209ENST00000487118 MED23Q9ULK4 1368 aa10.4□□□□□ -0.74
NUDCD3-209ENST00000487118 ZBTB22O15209 634 aa10.4□□□□□ -0.74
NUDCD3-209ENST00000487118 TAF5LO75529 589 aa10.4□□□□□ -0.74
NUDCD3-209ENST00000487118 HOXA10P31260 410 aaPredicted RBP10.4□□□□□ -0.74
NUDCD3-209ENST00000487118 NMIQ13287 307 aaPredicted RBP10.4□□□□□ -0.74
NUDCD3-209ENST00000487118 SCARF1Q14162 830 aa10.4□□□□□ -0.74
NUDCD3-209ENST00000487118 CCDC102BQ68D86 513 aa10.4□□□□□ -0.74
NUDCD3-209ENST00000487118 ANKRD2Q9GZV1 360 aa10.4□□□□□ -0.74
NUDCD3-209ENST00000487118 LSG1Q9H089 658 aaKnown RBP10.4□□□□□ -0.74
NUDCD3-209ENST00000487118 AKAP11Q9UKA4 1901 aa10.39□□□□□ -0.75
NUDCD3-209ENST00000487118 GOLIM4O00461 696 aa10.39□□□□□ -0.75
NUDCD3-209ENST00000487118 MCAMP43121 646 aa10.39□□□□□ -0.75
NUDCD3-209ENST00000487118 PHKA1P46020 1223 aa10.39□□□□□ -0.75
NUDCD3-209ENST00000487118 CWC27Q6UX04 472 aaKnown RBP10.39□□□□□ -0.75
NUDCD3-209ENST00000487118 FAM227BQ96M60 508 aa10.39□□□□□ -0.75
NUDCD3-209ENST00000487118 BRIP1Q9BX63 1249 aa10.39□□□□□ -0.75
NUDCD3-209ENST00000487118 ANO2Q9NQ90 1003 aa10.39□□□□□ -0.75
NUDCD3-209ENST00000487118 NDUFB9Q9Y6M9 179 aa10.39□□□□□ -0.75
NUDCD3-209ENST00000487118 ZNF804BA4D1E1 1349 aa10.38□□□□□ -0.75
NUDCD3-209ENST00000487118 A0A0D9SFI3 127 aa10.38□□□□□ -0.75
NUDCD3-209ENST00000487118 SNAP23O00161 211 aa10.38□□□□□ -0.75
NUDCD3-209ENST00000487118 MMP10P09238 476 aa10.38□□□□□ -0.75
NUDCD3-209ENST00000487118 ZAP70P43403 619 aa10.38□□□□□ -0.75
NUDCD3-209ENST00000487118 ANAPC15P60006 121 aa10.38□□□□□ -0.75
NUDCD3-209ENST00000487118 RPGRQ92834 1020 aaKnown RBP10.38□□□□□ -0.75
NUDCD3-209ENST00000487118 RBM17Q96I25 401 aaKnown RBP10.38□□□□□ -0.75
NUDCD3-209ENST00000487118 CRAMP1Q96RY5 1269 aa10.38□□□□□ -0.75
NUDCD3-209ENST00000487118 ANTXR1Q9H6X2 564 aa10.38□□□□□ -0.75
NUDCD3-209ENST00000487118 PARP3Q9Y6F1 533 aa10.38□□□□□ -0.75
NUDCD3-209ENST00000487118 LRRC37AA6NMS7 1700 aa10.38□□□□□ -0.75
NUDCD3-209ENST00000487118 IRS2Q9Y4H2 1338 aa10.37□□□□□ -0.75
NUDCD3-209ENST00000487118 CCDC85CA6NKD9 419 aa10.37□□□□□ -0.75
NUDCD3-209ENST00000487118 ZFYP08048 801 aaPredicted RBP10.37□□□□□ -0.75
NUDCD3-209ENST00000487118 MCCP23508 829 aa10.37□□□□□ -0.75
NUDCD3-209ENST00000487118 HSPA4P34932 840 aa10.37□□□□□ -0.75
NUDCD3-209ENST00000487118 FKBP4Q02790 459 aaKnown RBP eCLIP10.37□□□□□ -0.75
NUDCD3-209ENST00000487118 BECN1Q14457 450 aa10.37□□□□□ -0.75
NUDCD3-209ENST00000487118 RABEP1Q15276 862 aa10.37□□□□□ -0.75
NUDCD3-209ENST00000487118 TTF1Q15361 905 aaPredicted RBP10.37□□□□□ -0.75
NUDCD3-209ENST00000487118 LRRFIP1Q32MZ4 808 aaKnown RBP10.37□□□□□ -0.75
NUDCD3-209ENST00000487118 ZMYM1Q5SVZ6 1142 aa10.37□□□□□ -0.75
NUDCD3-209ENST00000487118 KIAA1211Q6ZU35 1233 aa10.37□□□□□ -0.75
NUDCD3-209ENST00000487118 SNX21Q969T3 373 aa10.37□□□□□ -0.75
NUDCD3-209ENST00000487118 HELLSQ9NRZ9 838 aa10.37□□□□□ -0.75
NUDCD3-209ENST00000487118 HMG20BQ9P0W2 317 aa10.37□□□□□ -0.75
NUDCD3-209ENST00000487118 CCDC171Q6TFL3 1326 aa10.36□□□□□ -0.75
NUDCD3-209ENST00000487118 DOCK2Q92608 1830 aa10.36□□□□□ -0.75
NUDCD3-209ENST00000487118 RNF113AO15541 343 aaKnown RBP10.36□□□□□ -0.75
NUDCD3-209ENST00000487118 BBOX1O75936 387 aa10.36□□□□□ -0.75
NUDCD3-209ENST00000487118 CYP2E1P05181 493 aaPredicted RBP10.36□□□□□ -0.75
NUDCD3-209ENST00000487118 MCMDC2Q4G0Z9 681 aa10.36□□□□□ -0.75
NUDCD3-209ENST00000487118 PI16Q6UXB8 463 aa10.36□□□□□ -0.75
NUDCD3-209ENST00000487118 TMC4Q7Z404 712 aa10.36□□□□□ -0.75
NUDCD3-209ENST00000487118 FBXO33Q7Z6M2 555 aa10.36□□□□□ -0.75
NUDCD3-209ENST00000487118 KCNB2Q92953 911 aa10.36□□□□□ -0.75
NUDCD3-209ENST00000487118 LEMD3Q9Y2U8 911 aa10.36□□□□□ -0.75
NUDCD3-209ENST00000487118 COL11A2P13942 1736 aaPredicted RBP10.36□□□□□ -0.75
NUDCD3-209ENST00000487118 PDS5AQ29RF7 1337 aaKnown RBP10.35□□□□□ -0.75
NUDCD3-209ENST00000487118 SEMA3EO15041 775 aa10.35□□□□□ -0.75
NUDCD3-209ENST00000487118 SRGNP10124 158 aa10.35□□□□□ -0.75
NUDCD3-209ENST00000487118 NPR1P16066 1061 aa10.35□□□□□ -0.75
NUDCD3-209ENST00000487118 PDE6BP35913 854 aa10.35□□□□□ -0.75
NUDCD3-209ENST00000487118 BCAMP50895 628 aa10.35□□□□□ -0.75
NUDCD3-209ENST00000487118 PTH1RQ03431 593 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms