RNA–Protein interactions for RNA: ENST00000486935.2

SEMA4D-219, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 969 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-219ENST00000486935 USP17L1Q7RTZ2 530 aa19.46■□□□□ 0.71
SEMA4D-219ENST00000486935 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.46■□□□□ 0.71
SEMA4D-219ENST00000486935 DCPSQ96C86 337 aaKnown RBP19.46■□□□□ 0.71
SEMA4D-219ENST00000486935 CAPNS2Q96L46 248 aa19.46■□□□□ 0.71
SEMA4D-219ENST00000486935 ANKRD2Q9GZV1 360 aa19.46■□□□□ 0.71
SEMA4D-219ENST00000486935 NOB1Q9ULX3 412 aaKnown RBP19.46■□□□□ 0.71
SEMA4D-219ENST00000486935 LEMD3Q9Y2U8 911 aa19.46■□□□□ 0.71
SEMA4D-219ENST00000486935 CHMP3Q9Y3E7 222 aa19.46■□□□□ 0.71
SEMA4D-219ENST00000486935 ECE1P42892 770 aa19.45■□□□□ 0.7
SEMA4D-219ENST00000486935 KIF4BQ2VIQ3 1234 aa19.45■□□□□ 0.7
SEMA4D-219ENST00000486935 KRT26Q7Z3Y9 468 aa19.45■□□□□ 0.7
SEMA4D-219ENST00000486935 TNS4Q8IZW8 715 aa19.45■□□□□ 0.7
SEMA4D-219ENST00000486935 AGBL3Q8NEM8 1001 aa19.45■□□□□ 0.7
SEMA4D-219ENST00000486935 WBP1LQ9NX94 342 aa19.45■□□□□ 0.7
SEMA4D-219ENST00000486935 BRPF1P55201 1214 aaPredicted RBP19.44■□□□□ 0.7
SEMA4D-219ENST00000486935 IFIT5Q13325 482 aaKnown RBP19.44■□□□□ 0.7
SEMA4D-219ENST00000486935 SAPCD2Q86UD0 394 aa19.44■□□□□ 0.7
SEMA4D-219ENST00000486935 FBXW7Q969H0 707 aa19.44■□□□□ 0.7
SEMA4D-219ENST00000486935 C9orf78Q9NZ63 289 aaPredicted RBP19.44■□□□□ 0.7
SEMA4D-219ENST00000486935 ZNF804BA4D1E1 1349 aa19.44■□□□□ 0.7
SEMA4D-219ENST00000486935 MED23Q9ULK4 1368 aa19.44■□□□□ 0.7
SEMA4D-219ENST00000486935 GRM8O00222 908 aa19.43■□□□□ 0.7
SEMA4D-219ENST00000486935 USP17L8P0C7I0 530 aa19.43■□□□□ 0.7
SEMA4D-219ENST00000486935 KCNJ4P48050 445 aa19.43■□□□□ 0.7
SEMA4D-219ENST00000486935 ZNF280AP59817 542 aaPredicted RBP19.43■□□□□ 0.7
SEMA4D-219ENST00000486935 MAP2K1Q02750 393 aaPredicted RBP19.43■□□□□ 0.7
SEMA4D-219ENST00000486935 ZKSCAN2Q63HK3 967 aa19.43■□□□□ 0.7
SEMA4D-219ENST00000486935 LMBR1LQ6UX01 489 aa19.43■□□□□ 0.7
SEMA4D-219ENST00000486935 TXNRD3Q86VQ6 643 aa19.43■□□□□ 0.7
SEMA4D-219ENST00000486935 ADM5C9JUS6 153 aa19.42■□□□□ 0.7
SEMA4D-219ENST00000486935 CTCFP49711 727 aaPredicted RBP19.42■□□□□ 0.7
SEMA4D-219ENST00000486935 CHRNDQ07001 517 aa19.42■□□□□ 0.7
SEMA4D-219ENST00000486935 SCARF1Q14162 830 aa19.42■□□□□ 0.7
SEMA4D-219ENST00000486935 EPHA10Q5JZY3 1008 aa19.42■□□□□ 0.7
SEMA4D-219ENST00000486935 GMLQ99445 158 aa19.42■□□□□ 0.7
SEMA4D-219ENST00000486935 MXD3Q9BW11 206 aa19.42■□□□□ 0.7
SEMA4D-219ENST00000486935 SRCIN1Q9C0H9 1055 aa19.42■□□□□ 0.7
SEMA4D-219ENST00000486935 COA1Q9GZY4 146 aa19.42■□□□□ 0.7
SEMA4D-219ENST00000486935 ASTN2O75129 1339 aaPredicted RBP19.42■□□□□ 0.7
SEMA4D-219ENST00000486935 IPO8O15397 1037 aaKnown RBP19.41■□□□□ 0.7
SEMA4D-219ENST00000486935 ALDH1L1O75891 902 aa19.41■□□□□ 0.7
SEMA4D-219ENST00000486935 KLRK1P26718 216 aa19.41■□□□□ 0.7
SEMA4D-219ENST00000486935 HELBQ8NG08 1087 aaPredicted RBP19.41■□□□□ 0.7
SEMA4D-219ENST00000486935 TNNQ9UQP3 1299 aa19.41■□□□□ 0.7
SEMA4D-219ENST00000486935 PTPRCP08575 1304 aa19.41■□□□□ 0.7
SEMA4D-219ENST00000486935 AOC2O75106 756 aa19.4■□□□□ 0.7
SEMA4D-219ENST00000486935 TAF5LO75529 589 aa19.4■□□□□ 0.7
SEMA4D-219ENST00000486935 CCDC57Q2TAC2 916 aa19.4■□□□□ 0.7
SEMA4D-219ENST00000486935 TAF7LQ5H9L4 462 aa19.4■□□□□ 0.7
SEMA4D-219ENST00000486935 DACT2Q5SW24 774 aa19.4■□□□□ 0.7
SEMA4D-219ENST00000486935 SULF1Q8IWU6 871 aa19.4■□□□□ 0.7
SEMA4D-219ENST00000486935 MYOZ2Q9NPC6 264 aa19.4■□□□□ 0.7
SEMA4D-219ENST00000486935 GGA3Q9NZ52 723 aa19.4■□□□□ 0.7
SEMA4D-219ENST00000486935 SNAP23O00161 211 aa19.39■□□□□ 0.69
SEMA4D-219ENST00000486935 LBX1P52954 281 aa19.39■□□□□ 0.69
SEMA4D-219ENST00000486935 IRX6P78412 446 aaPredicted RBP19.39■□□□□ 0.69
SEMA4D-219ENST00000486935 ANGEL2Q5VTE6 544 aaKnown RBP19.39■□□□□ 0.69
SEMA4D-219ENST00000486935 ATF7IPQ6VMQ6 1270 aa19.39■□□□□ 0.69
SEMA4D-219ENST00000486935 CLUAP1Q96AJ1 413 aa19.39■□□□□ 0.69
SEMA4D-219ENST00000486935 ZNF594Q96JF6 807 aaPredicted RBP19.39■□□□□ 0.69
SEMA4D-219ENST00000486935 HHIPL1Q96JK4 782 aa19.39■□□□□ 0.69
SEMA4D-219ENST00000486935 CAPN15O75808 1086 aa19.38■□□□□ 0.69
SEMA4D-219ENST00000486935 TRIM27P14373 513 aa19.38■□□□□ 0.69
SEMA4D-219ENST00000486935 HUNKP57058 714 aa19.38■□□□□ 0.69
SEMA4D-219ENST00000486935 STRIP1Q5VSL9 837 aa19.38■□□□□ 0.69
SEMA4D-219ENST00000486935 TTLL5Q6EMB2 1281 aa19.38■□□□□ 0.69
SEMA4D-219ENST00000486935 C2orf69Q8N8R5 385 aa19.38■□□□□ 0.69
SEMA4D-219ENST00000486935 BEGAINQ9BUH8 593 aa19.38■□□□□ 0.69
SEMA4D-219ENST00000486935 API5Q9BZZ5 524 aaKnown RBP19.38■□□□□ 0.69
SEMA4D-219ENST00000486935 PRDM10Q9NQV6 1147 aa19.38■□□□□ 0.69
SEMA4D-219ENST00000486935 MAP2K2P36507 400 aa19.37■□□□□ 0.69
SEMA4D-219ENST00000486935 C20orf194Q5TEA3 1177 aa19.37■□□□□ 0.69
SEMA4D-219ENST00000486935 LDHAL6AQ6ZMR3 332 aa19.37■□□□□ 0.69
SEMA4D-219ENST00000486935 FTSJ3Q8IY81 847 aaKnown RBP19.37■□□□□ 0.69
SEMA4D-219ENST00000486935 OGFOD1Q8N543 542 aa19.37■□□□□ 0.69
SEMA4D-219ENST00000486935 ARHGAP45Q92619 1136 aa19.37■□□□□ 0.69
SEMA4D-219ENST00000486935 SUCLG2Q96I99 432 aa19.37■□□□□ 0.69
SEMA4D-219ENST00000486935 SCN9AQ15858 1988 aa19.37■□□□□ 0.69
SEMA4D-219ENST00000486935 ZNF609O15014 1411 aa19.36■□□□□ 0.69
SEMA4D-219ENST00000486935 NEFLP07196 543 aa19.36■□□□□ 0.69
SEMA4D-219ENST00000486935 NBPF7P0C2Y1 421 aaPredicted RBP19.36■□□□□ 0.69
SEMA4D-219ENST00000486935 GTF2IP78347 998 aa19.36■□□□□ 0.69
SEMA4D-219ENST00000486935 PANK1Q8TE04 598 aa19.36■□□□□ 0.69
SEMA4D-219ENST00000486935 GBA2Q9HCG7 927 aaPredicted RBP19.36■□□□□ 0.69
SEMA4D-219ENST00000486935 CD209Q9NNX6 404 aa19.36■□□□□ 0.69
SEMA4D-219ENST00000486935 CNNM1Q9NRU3 951 aa19.36■□□□□ 0.69
SEMA4D-219ENST00000486935 MYO3BQ8WXR4 1341 aa19.35■□□□□ 0.69
SEMA4D-219ENST00000486935 HSPA8P11142 646 aaKnown RBP19.35■□□□□ 0.69
SEMA4D-219ENST00000486935 DZIP1LQ8IYY4 767 aaKnown RBP19.35■□□□□ 0.69
SEMA4D-219ENST00000486935 CDCA5Q96FF9 252 aa19.35■□□□□ 0.69
SEMA4D-219ENST00000486935 SCAF8Q9UPN6 1271 aaKnown RBP19.35■□□□□ 0.69
SEMA4D-219ENST00000486935 MYH3P11055 1940 aa19.34■□□□□ 0.69
SEMA4D-219ENST00000486935 MS4A1P11836 297 aa19.34■□□□□ 0.69
SEMA4D-219ENST00000486935 RLBP1P12271 317 aa19.34■□□□□ 0.69
SEMA4D-219ENST00000486935 NBPF9Q3BBW0 867 aa19.34■□□□□ 0.69
SEMA4D-219ENST00000486935 KAZALD1Q96I82 304 aa19.34■□□□□ 0.69
SEMA4D-219ENST00000486935 TRPM7Q96QT4 1865 aa19.33■□□□□ 0.69
SEMA4D-219ENST00000486935 SPEF2Q9C093 1822 aa19.33■□□□□ 0.69
SEMA4D-219ENST00000486935 PDE3AQ14432 1141 aa19.33■□□□□ 0.68
SEMA4D-219ENST00000486935 RGMBQ6NW40 437 aa19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms