RNA–Protein interactions for RNA: ENST00000486810.5

COPS3-209, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 938 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-209ENST00000486810 GALNT12Q8IXK2 581 aa8.29□□□□□ -1.08
COPS3-209ENST00000486810 OSMRQ99650 979 aa8.29□□□□□ -1.08
COPS3-209ENST00000486810 EIF1AYO14602 144 aaKnown RBP8.28□□□□□ -1.08
COPS3-209ENST00000486810 TM4SF5O14894 197 aa8.28□□□□□ -1.08
COPS3-209ENST00000486810 TREHO43280 583 aa8.28□□□□□ -1.08
COPS3-209ENST00000486810 DEAF1O75398 565 aaPredicted RBP8.28□□□□□ -1.08
COPS3-209ENST00000486810 WFDC8Q8IUA0 241 aa8.28□□□□□ -1.08
COPS3-209ENST00000486810 IL22RA1Q8N6P7 574 aa8.28□□□□□ -1.08
COPS3-209ENST00000486810 LACRTQ9GZZ8 138 aa8.28□□□□□ -1.08
COPS3-209ENST00000486810 CPNE3O75131 537 aaKnown RBP8.27□□□□□ -1.09
COPS3-209ENST00000486810 SMNDC1O75940 238 aaKnown RBP eCLIP8.27□□□□□ -1.09
COPS3-209ENST00000486810 EDN3P14138 238 aa8.27□□□□□ -1.09
COPS3-209ENST00000486810 GRIK4Q16099 956 aa8.27□□□□□ -1.09
COPS3-209ENST00000486810 PLA2G4EQ3MJ16 856 aa8.27□□□□□ -1.09
COPS3-209ENST00000486810 FMR1NBQ8N0W7 255 aaPredicted RBP8.27□□□□□ -1.09
COPS3-209ENST00000486810 TMEM102Q8N9M5 508 aaPredicted RBP8.27□□□□□ -1.09
COPS3-209ENST00000486810 NXPE3Q969Y0 559 aa8.27□□□□□ -1.09
COPS3-209ENST00000486810 ASB16Q96NS5 453 aa8.27□□□□□ -1.09
COPS3-209ENST00000486810 CSRNP1Q96S65 589 aa8.27□□□□□ -1.09
COPS3-209ENST00000486810 ADAM19Q9H013 955 aa8.27□□□□□ -1.09
COPS3-209ENST00000486810 SH2B1Q9NRF2 756 aaPredicted RBP8.27□□□□□ -1.09
COPS3-209ENST00000486810 A0A1W2PP55 124 aa8.26□□□□□ -1.09
COPS3-209ENST00000486810 PDE2AO00408 941 aaPredicted RBP8.26□□□□□ -1.09
COPS3-209ENST00000486810 SPATA31C1P0DKV0 1188 aa8.26□□□□□ -1.09
COPS3-209ENST00000486810 TRIM28Q13263 835 aaKnown RBP8.26□□□□□ -1.09
COPS3-209ENST00000486810 ALYREFQ86V81 257 aaKnown RBP8.26□□□□□ -1.09
COPS3-209ENST00000486810 EPHA1P21709 976 aa8.25□□□□□ -1.09
COPS3-209ENST00000486810 CHRNA4P43681 627 aa8.25□□□□□ -1.09
COPS3-209ENST00000486810 UBE2Q2Q8WVN8 375 aa8.25□□□□□ -1.09
COPS3-209ENST00000486810 CCDC74AQ96AQ1 378 aa8.25□□□□□ -1.09
COPS3-209ENST00000486810 GZF1Q9H116 711 aaPredicted RBP8.25□□□□□ -1.09
COPS3-209ENST00000486810 DNAJC25Q9H1X3 360 aa8.25□□□□□ -1.09
COPS3-209ENST00000486810 NPHS2Q9NP85 383 aa8.25□□□□□ -1.09
COPS3-209ENST00000486810 SPDYE3A6NKU9 549 aa8.24□□□□□ -1.09
COPS3-209ENST00000486810 METTL12A8MUP2 240 aa8.24□□□□□ -1.09
COPS3-209ENST00000486810 NEFLP07196 543 aa8.24□□□□□ -1.09
COPS3-209ENST00000486810 SELPP16109 830 aa8.24□□□□□ -1.09
COPS3-209ENST00000486810 CDC27P30260 824 aa8.24□□□□□ -1.09
COPS3-209ENST00000486810 FMR1Q06787 632 aaKnown RBP eCLIP8.24□□□□□ -1.09
COPS3-209ENST00000486810 SETDB1Q15047 1291 aa8.24□□□□□ -1.09
COPS3-209ENST00000486810 PRRT3Q5FWE3 981 aa8.24□□□□□ -1.09
COPS3-209ENST00000486810 TXNDC11Q6PKC3 985 aa8.24□□□□□ -1.09
COPS3-209ENST00000486810 SHISA2Q6UWI4 295 aa8.24□□□□□ -1.09
COPS3-209ENST00000486810 CD163Q86VB7 1156 aa8.24□□□□□ -1.09
COPS3-209ENST00000486810 FBXO11Q86XK2 927 aa8.24□□□□□ -1.09
COPS3-209ENST00000486810 SETDB2Q96T68 719 aa8.24□□□□□ -1.09
COPS3-209ENST00000486810 TCF12Q99081 682 aa8.24□□□□□ -1.09
COPS3-209ENST00000486810 BHLHE41Q9C0J9 482 aaPredicted RBP8.24□□□□□ -1.09
COPS3-209ENST00000486810 SOX13Q9UN79 622 aa8.24□□□□□ -1.09
COPS3-209ENST00000486810 C1QTNF9BB2RNN3 333 aa8.23□□□□□ -1.09
COPS3-209ENST00000486810 LINC01387J3KSC0 135 aa8.23□□□□□ -1.09
COPS3-209ENST00000486810 PLCB3Q01970 1234 aa8.23□□□□□ -1.09
COPS3-209ENST00000486810 ENOX2Q16206 610 aaKnown RBP8.23□□□□□ -1.09
COPS3-209ENST00000486810 KIAA0319Q5VV43 1072 aa8.23□□□□□ -1.09
COPS3-209ENST00000486810 PI16Q6UXB8 463 aa8.23□□□□□ -1.09
COPS3-209ENST00000486810 CACTIN-AS1Q8N1I8 211 aa8.23□□□□□ -1.09
COPS3-209ENST00000486810 DTWD1Q8N5C7 304 aa8.23□□□□□ -1.09
COPS3-209ENST00000486810 GALNT11Q8NCW6 608 aa8.23□□□□□ -1.09
COPS3-209ENST00000486810 EPS8L3Q8TE67 593 aaKnown RBP8.23□□□□□ -1.09
COPS3-209ENST00000486810 PPME1Q9Y570 386 aa8.23□□□□□ -1.09
COPS3-209ENST00000486810 ELNP15502 786 aa8.22□□□□□ -1.09
COPS3-209ENST00000486810 PTPRAP18433 802 aa8.22□□□□□ -1.09
COPS3-209ENST00000486810 CDC25BP30305 580 aa8.22□□□□□ -1.09
COPS3-209ENST00000486810 RAC1P63000 192 aa8.22□□□□□ -1.09
COPS3-209ENST00000486810 HGSNATQ68CP4 663 aa8.22□□□□□ -1.09
COPS3-209ENST00000486810 DNAJC14Q6Y2X3 702 aaPredicted RBP8.22□□□□□ -1.09
COPS3-209ENST00000486810 CCNJLQ8IV13 435 aa8.22□□□□□ -1.09
COPS3-209ENST00000486810 MUC3BQ9H195 1237 aa8.22□□□□□ -1.09
COPS3-209ENST00000486810 PNMA6FA0A0J9YX94 578 aa8.21□□□□□ -1.1
COPS3-209ENST00000486810 DLL1O00548 723 aa8.21□□□□□ -1.1
COPS3-209ENST00000486810 GRIA4P48058 902 aa8.21□□□□□ -1.1
COPS3-209ENST00000486810 VN1R5Q7Z5H4 357 aa8.21□□□□□ -1.1
COPS3-209ENST00000486810 ZSCAN29Q8IWY8 852 aaPredicted RBP8.21□□□□□ -1.1
COPS3-209ENST00000486810 GLIS3Q8NEA6 775 aa8.21□□□□□ -1.1
COPS3-209ENST00000486810 WWC3Q9ULE0 1092 aa8.21□□□□□ -1.1
COPS3-209ENST00000486810 PROCP04070 461 aa8.2□□□□□ -1.1
COPS3-209ENST00000486810 P4HBP07237 508 aaKnown RBP8.2□□□□□ -1.1
COPS3-209ENST00000486810 SPRED3Q2MJR0 410 aa8.2□□□□□ -1.1
COPS3-209ENST00000486810 LIN7BQ9HAP6 207 aa8.2□□□□□ -1.1
COPS3-209ENST00000486810 ASAP3Q8TDY4 903 aa8.19□□□□□ -1.1
COPS3-209ENST00000486810 BSNDQ8WZ55 320 aa8.19□□□□□ -1.1
COPS3-209ENST00000486810 CARD10Q9BWT7 1032 aa8.19□□□□□ -1.1
COPS3-209ENST00000486810 KCNK4Q9NYG8 393 aa8.19□□□□□ -1.1
COPS3-209ENST00000486810 ANKRD33BA6NCL7 494 aa8.18□□□□□ -1.1
COPS3-209ENST00000486810 H3BRJ5 948 aa8.18□□□□□ -1.1
COPS3-209ENST00000486810 FSCN2O14926 492 aa8.18□□□□□ -1.1
COPS3-209ENST00000486810 MAPK8P45983 427 aa8.18□□□□□ -1.1
COPS3-209ENST00000486810 GRM2Q14416 872 aa8.18□□□□□ -1.1
COPS3-209ENST00000486810 FOXD4L6Q3SYB3 417 aaPredicted RBP8.18□□□□□ -1.1
COPS3-209ENST00000486810 GPAT2Q6NUI2 795 aa8.18□□□□□ -1.1
COPS3-209ENST00000486810 FOXD4L3Q6VB84 417 aaPredicted RBP8.18□□□□□ -1.1
COPS3-209ENST00000486810 LENG1Q96BZ8 264 aaPredicted RBP8.18□□□□□ -1.1
COPS3-209ENST00000486810 EHD4Q9H223 541 aa8.18□□□□□ -1.1
COPS3-209ENST00000486810 ABCB6Q9NP58 842 aa8.18□□□□□ -1.1
COPS3-209ENST00000486810 A0A096LPE4 126 aa8.17□□□□□ -1.1
COPS3-209ENST00000486810 A0A1W2PPZ6 126 aa8.17□□□□□ -1.1
COPS3-209ENST00000486810 SOX1O00570 391 aaPredicted RBP8.17□□□□□ -1.1
COPS3-209ENST00000486810 ADGRE1Q14246 886 aa8.17□□□□□ -1.1
COPS3-209ENST00000486810 NPAS4Q8IUM7 802 aa8.17□□□□□ -1.1
COPS3-209ENST00000486810 KLHDC7BQ96G42 594 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms