RNA–Protein interactions for RNA: ENST00000486524.1

SLX4-203, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

TSL 2

Gene SLX4, Length 3,075 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-203ENST00000486524 DZIP3Q86Y13 1208 aaKnown RBP13.32□□□□□ -0.28
SLX4-203ENST00000486524 H3BQV1 296 aa13.32□□□□□ -0.28
SLX4-203ENST00000486524 CTSWP56202 376 aa13.32□□□□□ -0.28
SLX4-203ENST00000486524 IFFO2Q5TF58 517 aa13.32□□□□□ -0.28
SLX4-203ENST00000486524 NCOA5Q9HCD5 579 aaKnown RBP13.32□□□□□ -0.28
SLX4-203ENST00000486524 ANKRD18BA2A2Z9 1011 aa13.31□□□□□ -0.28
SLX4-203ENST00000486524 HCLS1P14317 486 aaPredicted RBP13.31□□□□□ -0.28
SLX4-203ENST00000486524 FAM184AQ8NB25 1140 aa13.31□□□□□ -0.28
SLX4-203ENST00000486524 HELBQ8NG08 1087 aaPredicted RBP13.31□□□□□ -0.28
SLX4-203ENST00000486524 NAP1L5Q96NT1 182 aaPredicted RBP13.31□□□□□ -0.28
SLX4-203ENST00000486524 MPNDQ8N594 471 aa13.31□□□□□ -0.28
SLX4-203ENST00000486524 PLA2G12BQ9BX93 195 aa13.31□□□□□ -0.28
SLX4-203ENST00000486524 MSNP26038 577 aaKnown RBP13.31□□□□□ -0.28
SLX4-203ENST00000486524 ZSCAN30Q86W11 494 aa13.31□□□□□ -0.28
SLX4-203ENST00000486524 PDLIM2Q96JY6 352 aa13.31□□□□□ -0.28
SLX4-203ENST00000486524 PUS7LQ9H0K6 701 aaKnown RBP13.31□□□□□ -0.28
SLX4-203ENST00000486524 HMGB1P09429 215 aaKnown RBP13.3□□□□□ -0.28
SLX4-203ENST00000486524 CEBPZQ03701 1054 aaKnown RBP13.3□□□□□ -0.28
SLX4-203ENST00000486524 CAMK4Q16566 473 aa13.3□□□□□ -0.28
SLX4-203ENST00000486524 RIPOR2Q9Y4F9 1068 aa13.3□□□□□ -0.28
SLX4-203ENST00000486524 DISP2A7MBM2 1401 aa13.3□□□□□ -0.28
SLX4-203ENST00000486524 SPATA32Q96LK8 384 aa13.3□□□□□ -0.28
SLX4-203ENST00000486524 GPHNQ9NQX3 736 aaPredicted RBP13.3□□□□□ -0.28
SLX4-203ENST00000486524 RIC1Q4ADV7 1423 aa13.3□□□□□ -0.28
SLX4-203ENST00000486524 UBN2Q6ZU65 1347 aa13.29□□□□□ -0.28
SLX4-203ENST00000486524 GOLGA6L4A6NEF3 574 aa13.29□□□□□ -0.28
SLX4-203ENST00000486524 NUTM2BA6NNL0 878 aaPredicted RBP13.29□□□□□ -0.28
SLX4-203ENST00000486524 NUTM2EB1AL46 878 aaPredicted RBP13.29□□□□□ -0.28
SLX4-203ENST00000486524 MCAMP43121 646 aa13.29□□□□□ -0.28
SLX4-203ENST00000486524 PLCB2Q00722 1185 aa13.29□□□□□ -0.28
SLX4-203ENST00000486524 NUTM2AQ8IVF1 878 aaPredicted RBP13.29□□□□□ -0.28
SLX4-203ENST00000486524 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.29□□□□□ -0.28
SLX4-203ENST00000486524 LAMA4Q16363 1823 aa13.29□□□□□ -0.28
SLX4-203ENST00000486524 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.29□□□□□ -0.28
SLX4-203ENST00000486524 CDHR2Q9BYE9 1310 aa13.29□□□□□ -0.28
SLX4-203ENST00000486524 SNAP23O00161 211 aa13.28□□□□□ -0.28
SLX4-203ENST00000486524 LIG1P18858 919 aa13.28□□□□□ -0.28
SLX4-203ENST00000486524 RAB11FIP4Q86YS3 637 aa13.28□□□□□ -0.28
SLX4-203ENST00000486524 FBXO3Q9UK99 471 aa13.28□□□□□ -0.28
SLX4-203ENST00000486524 PTPDC1A2A3K4 754 aa13.28□□□□□ -0.28
SLX4-203ENST00000486524 PFKFB2O60825 505 aa13.28□□□□□ -0.28
SLX4-203ENST00000486524 IDH1O75874 414 aaKnown RBP13.28□□□□□ -0.28
SLX4-203ENST00000486524 FGAP02671 866 aa13.28□□□□□ -0.28
SLX4-203ENST00000486524 PTMAP06454 111 aaKnown RBP13.28□□□□□ -0.28
SLX4-203ENST00000486524 EXOSC10Q01780 885 aaKnown RBP13.28□□□□□ -0.28
SLX4-203ENST00000486524 GUCY1B3Q02153 619 aa13.28□□□□□ -0.28
SLX4-203ENST00000486524 LRRFIP1Q32MZ4 808 aaKnown RBP13.28□□□□□ -0.28
SLX4-203ENST00000486524 USP25Q9UHP3 1055 aa13.28□□□□□ -0.28
SLX4-203ENST00000486524 FOXP2O15409 715 aa13.28□□□□□ -0.28
SLX4-203ENST00000486524 ATP6V1AP38606 617 aa13.28□□□□□ -0.28
SLX4-203ENST00000486524 DDB1Q16531 1140 aa13.28□□□□□ -0.28
SLX4-203ENST00000486524 GPAA1O43292 621 aa13.27□□□□□ -0.28
SLX4-203ENST00000486524 PDE8AO60658 829 aa13.27□□□□□ -0.28
SLX4-203ENST00000486524 LETM1O95202 739 aaPredicted RBP13.27□□□□□ -0.28
SLX4-203ENST00000486524 CTDNEP1O95476 244 aa13.27□□□□□ -0.28
SLX4-203ENST00000486524 IMMTQ16891 758 aaKnown RBP13.27□□□□□ -0.28
SLX4-203ENST00000486524 SLC9C2Q5TAH2 1124 aa13.27□□□□□ -0.28
SLX4-203ENST00000486524 NSUN7Q8NE18 718 aaKnown RBP13.27□□□□□ -0.28
SLX4-203ENST00000486524 ROBO1Q9Y6N7 1651 aa13.27□□□□□ -0.28
SLX4-203ENST00000486524 COL14A1Q05707 1796 aaKnown RBP13.27□□□□□ -0.28
SLX4-203ENST00000486524 IL6STP40189 918 aaPredicted RBP13.27□□□□□ -0.29
SLX4-203ENST00000486524 LEO1Q8WVC0 666 aaPredicted RBP13.27□□□□□ -0.29
SLX4-203ENST00000486524 APPBP2Q92624 585 aa13.27□□□□□ -0.29
SLX4-203ENST00000486524 APPP05067 770 aa13.26□□□□□ -0.29
SLX4-203ENST00000486524 ZFYP08048 801 aaPredicted RBP13.26□□□□□ -0.29
SLX4-203ENST00000486524 PHKA1P46020 1223 aa13.26□□□□□ -0.29
SLX4-203ENST00000486524 SCAND2PQ9GZW5 306 aaPredicted RBP13.26□□□□□ -0.29
SLX4-203ENST00000486524 LRP6O75581 1613 aa13.26□□□□□ -0.29
SLX4-203ENST00000486524 PDE8BO95263 885 aa13.26□□□□□ -0.29
SLX4-203ENST00000486524 PDIA4P13667 645 aaKnown RBP13.26□□□□□ -0.29
SLX4-203ENST00000486524 PDIA3P30101 505 aaKnown RBP13.26□□□□□ -0.29
SLX4-203ENST00000486524 SUSD4Q5VX71 490 aa13.26□□□□□ -0.29
SLX4-203ENST00000486524 CKAP2LQ8IYA6 745 aa13.26□□□□□ -0.29
SLX4-203ENST00000486524 DACT1Q9NYF0 836 aa13.26□□□□□ -0.29
SLX4-203ENST00000486524 CTNNA3Q9UI47 895 aa13.26□□□□□ -0.29
SLX4-203ENST00000486524 RESTQ13127 1097 aa13.26□□□□□ -0.29
SLX4-203ENST00000486524 BICD2Q8TD16 824 aa13.26□□□□□ -0.29
SLX4-203ENST00000486524 FTOQ9C0B1 505 aaKnown RBP eCLIP13.26□□□□□ -0.29
SLX4-203ENST00000486524 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.26□□□□□ -0.29
SLX4-203ENST00000486524 PIH1D3Q9NQM4 214 aaKnown RBP13.26□□□□□ -0.29
SLX4-203ENST00000486524 NUP98P52948 1817 aa13.26□□□□□ -0.29
SLX4-203ENST00000486524 CRKLP46109 303 aaKnown RBP13.25□□□□□ -0.29
SLX4-203ENST00000486524 CCDC102BQ68D86 513 aa13.25□□□□□ -0.29
SLX4-203ENST00000486524 VGLL2Q8N8G2 317 aa13.25□□□□□ -0.29
SLX4-203ENST00000486524 SMARCC2Q8TAQ2 1214 aa13.25□□□□□ -0.29
SLX4-203ENST00000486524 SEC31BQ9NQW1 1179 aa13.25□□□□□ -0.29
SLX4-203ENST00000486524 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.25□□□□□ -0.29
SLX4-203ENST00000486524 A0A0U1RQG5 324 aaPredicted RBP13.25□□□□□ -0.29
SLX4-203ENST00000486524 NUP62CLQ9H1M0 184 aa13.25□□□□□ -0.29
SLX4-203ENST00000486524 COL16A1Q07092 1604 aaPredicted RBP13.24□□□□□ -0.29
SLX4-203ENST00000486524 ERVV-1B6SEH8 477 aa13.24□□□□□ -0.29
SLX4-203ENST00000486524 ZNF213O14771 459 aa13.24□□□□□ -0.29
SLX4-203ENST00000486524 PRC1O43663 620 aa13.24□□□□□ -0.29
SLX4-203ENST00000486524 INTS5Q6P9B9 1019 aaKnown RBP13.24□□□□□ -0.29
SLX4-203ENST00000486524 ZNF34Q8IZ26 560 aa13.24□□□□□ -0.29
SLX4-203ENST00000486524 LLPHQ9BRT6 129 aaKnown RBP13.24□□□□□ -0.29
SLX4-203ENST00000486524 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.24□□□□□ -0.29
SLX4-203ENST00000486524 DENND2AQ9ULE3 1009 aa13.24□□□□□ -0.29
SLX4-203ENST00000486524 NOL7Q9UMY1 257 aaKnown RBP13.24□□□□□ -0.29
SLX4-203ENST00000486524 ELP1O95163 1332 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms