RNA–Protein interactions for RNA: ENST00000486427.1

LTN1-206, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene LTN1, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-206ENST00000486427 PEAR1Q5VY43 1037 aaPredicted RBP9.85□□□□□ -0.83
LTN1-206ENST00000486427 CD163Q86VB7 1156 aa9.85□□□□□ -0.83
LTN1-206ENST00000486427 FMR1NBQ8N0W7 255 aaPredicted RBP9.85□□□□□ -0.83
LTN1-206ENST00000486427 ZKSCAN3Q9BRR0 538 aa9.85□□□□□ -0.83
LTN1-206ENST00000486427 C1QTNF9BB2RNN3 333 aa9.84□□□□□ -0.83
LTN1-206ENST00000486427 PATL2C9JE40 543 aaKnown RBP9.84□□□□□ -0.83
LTN1-206ENST00000486427 DEAF1O75398 565 aaPredicted RBP9.84□□□□□ -0.83
LTN1-206ENST00000486427 MAPK1P28482 360 aa9.84□□□□□ -0.83
LTN1-206ENST00000486427 RAC1P63000 192 aa9.84□□□□□ -0.83
LTN1-206ENST00000486427 OSMRQ99650 979 aa9.84□□□□□ -0.83
LTN1-206ENST00000486427 EDN3P14138 238 aa9.83□□□□□ -0.84
LTN1-206ENST00000486427 GPAT2Q6NUI2 795 aa9.83□□□□□ -0.84
LTN1-206ENST00000486427 SH2B1Q9NRF2 756 aaPredicted RBP9.83□□□□□ -0.84
LTN1-206ENST00000486427 PDE2AO00408 941 aaPredicted RBP9.82□□□□□ -0.84
LTN1-206ENST00000486427 ELNP15502 786 aa9.82□□□□□ -0.84
LTN1-206ENST00000486427 DTWD1Q8N5C7 304 aa9.82□□□□□ -0.84
LTN1-206ENST00000486427 DMRTB1Q96MA1 342 aa9.82□□□□□ -0.84
LTN1-206ENST00000486427 SELPP16109 830 aa9.81□□□□□ -0.84
LTN1-206ENST00000486427 EPHA1P21709 976 aa9.81□□□□□ -0.84
LTN1-206ENST00000486427 CDC27P30260 824 aa9.81□□□□□ -0.84
LTN1-206ENST00000486427 TXNDC11Q6PKC3 985 aa9.81□□□□□ -0.84
LTN1-206ENST00000486427 SHISA2Q6UWI4 295 aa9.81□□□□□ -0.84
LTN1-206ENST00000486427 FBXO11Q86XK2 927 aa9.81□□□□□ -0.84
LTN1-206ENST00000486427 GALNT12Q8IXK2 581 aa9.81□□□□□ -0.84
LTN1-206ENST00000486427 TMEM102Q8N9M5 508 aaPredicted RBP9.81□□□□□ -0.84
LTN1-206ENST00000486427 ALKBH8Q96BT7 664 aaKnown RBP9.81□□□□□ -0.84
LTN1-206ENST00000486427 ADAM19Q9H013 955 aa9.81□□□□□ -0.84
LTN1-206ENST00000486427 PPME1Q9Y570 386 aa9.81□□□□□ -0.84
LTN1-206ENST00000486427 EIF1AYO14602 144 aaKnown RBP9.8□□□□□ -0.84
LTN1-206ENST00000486427 CPNE3O75131 537 aaKnown RBP9.8□□□□□ -0.84
LTN1-206ENST00000486427 NEFLP07196 543 aa9.8□□□□□ -0.84
LTN1-206ENST00000486427 PTPRAP18433 802 aa9.8□□□□□ -0.84
LTN1-206ENST00000486427 CDC25BP30305 580 aa9.8□□□□□ -0.84
LTN1-206ENST00000486427 CACTIN-AS1Q8N1I8 211 aa9.8□□□□□ -0.84
LTN1-206ENST00000486427 NXPE3Q969Y0 559 aa9.8□□□□□ -0.84
LTN1-206ENST00000486427 A0A1W2PP55 124 aa9.79□□□□□ -0.84
LTN1-206ENST00000486427 LINC01387J3KSC0 135 aa9.79□□□□□ -0.84
LTN1-206ENST00000486427 APBA3O96018 575 aa9.79□□□□□ -0.84
LTN1-206ENST00000486427 PROCP04070 461 aa9.79□□□□□ -0.84
LTN1-206ENST00000486427 DSC3Q14574 896 aa9.79□□□□□ -0.84
LTN1-206ENST00000486427 SETDB1Q15047 1291 aa9.79□□□□□ -0.84
LTN1-206ENST00000486427 SPOCK3Q9BQ16 436 aa9.79□□□□□ -0.84
LTN1-206ENST00000486427 CSRNP1Q96S65 589 aa9.78□□□□□ -0.84
LTN1-206ENST00000486427 METTL12A8MUP2 240 aa9.77□□□□□ -0.85
LTN1-206ENST00000486427 DLL1O00548 723 aa9.77□□□□□ -0.85
LTN1-206ENST00000486427 TREHO43280 583 aa9.77□□□□□ -0.85
LTN1-206ENST00000486427 SND1Q7KZF4 910 aaKnown RBP eCLIP9.77□□□□□ -0.85
LTN1-206ENST00000486427 GALNT11Q8NCW6 608 aa9.77□□□□□ -0.85
LTN1-206ENST00000486427 BHLHE41Q9C0J9 482 aaPredicted RBP9.77□□□□□ -0.85
LTN1-206ENST00000486427 MUC3BQ9H195 1237 aa9.77□□□□□ -0.85
LTN1-206ENST00000486427 DNAJC25Q9H1X3 360 aa9.77□□□□□ -0.85
LTN1-206ENST00000486427 NPHS2Q9NP85 383 aa9.77□□□□□ -0.85
LTN1-206ENST00000486427 SOX13Q9UN79 622 aa9.77□□□□□ -0.85
LTN1-206ENST00000486427 MSTNO14793 375 aa9.76□□□□□ -0.85
LTN1-206ENST00000486427 TM4SF5O14894 197 aa9.76□□□□□ -0.85
LTN1-206ENST00000486427 CCDC74AQ96AQ1 378 aa9.76□□□□□ -0.85
LTN1-206ENST00000486427 ASB16Q96NS5 453 aa9.76□□□□□ -0.85
LTN1-206ENST00000486427 IGHA1P01876 353 aa9.75□□□□□ -0.85
LTN1-206ENST00000486427 LENG1Q96BZ8 264 aaPredicted RBP9.75□□□□□ -0.85
LTN1-206ENST00000486427 NACC1Q96RE7 527 aa9.75□□□□□ -0.85
LTN1-206ENST00000486427 TCF12Q99081 682 aa9.75□□□□□ -0.85
LTN1-206ENST00000486427 CARD10Q9BWT7 1032 aa9.75□□□□□ -0.85
LTN1-206ENST00000486427 PLCB3Q01970 1234 aa9.74□□□□□ -0.85
LTN1-206ENST00000486427 KIAA0319Q5VV43 1072 aa9.74□□□□□ -0.85
LTN1-206ENST00000486427 VN1R5Q7Z5H4 357 aa9.74□□□□□ -0.85
LTN1-206ENST00000486427 CCNJLQ8IV13 435 aa9.74□□□□□ -0.85
LTN1-206ENST00000486427 ASAP3Q8TDY4 903 aa9.74□□□□□ -0.85
LTN1-206ENST00000486427 LIN7BQ9HAP6 207 aa9.74□□□□□ -0.85
LTN1-206ENST00000486427 SRA1Q9HD15 236 aaKnown RBP9.74□□□□□ -0.85
LTN1-206ENST00000486427 C9orf172C9J069 976 aa9.73□□□□□ -0.85
LTN1-206ENST00000486427 H3BRJ5 948 aa9.73□□□□□ -0.85
LTN1-206ENST00000486427 FSCN2O14926 492 aa9.73□□□□□ -0.85
LTN1-206ENST00000486427 ADGRE1Q14246 886 aa9.73□□□□□ -0.85
LTN1-206ENST00000486427 MBTPS1Q14703 1052 aa9.73□□□□□ -0.85
LTN1-206ENST00000486427 HGSNATQ68CP4 663 aa9.73□□□□□ -0.85
LTN1-206ENST00000486427 MAP4K3Q8IVH8 894 aa9.73□□□□□ -0.85
LTN1-206ENST00000486427 ZSCAN29Q8IWY8 852 aaPredicted RBP9.73□□□□□ -0.85
LTN1-206ENST00000486427 EPS8L3Q8TE67 593 aaKnown RBP9.73□□□□□ -0.85
LTN1-206ENST00000486427 BSNDQ8WZ55 320 aa9.73□□□□□ -0.85
LTN1-206ENST00000486427 PNMA6FA0A0J9YX94 578 aa9.72□□□□□ -0.85
LTN1-206ENST00000486427 GRIA4P48058 902 aa9.72□□□□□ -0.85
LTN1-206ENST00000486427 FMR1Q06787 632 aaKnown RBP eCLIP9.72□□□□□ -0.85
LTN1-206ENST00000486427 ENOX2Q16206 610 aaKnown RBP9.72□□□□□ -0.85
LTN1-206ENST00000486427 FOXD4L6Q3SYB3 417 aaPredicted RBP9.72□□□□□ -0.85
LTN1-206ENST00000486427 IGF2-ASQ6U949 168 aa9.72□□□□□ -0.85
LTN1-206ENST00000486427 PI16Q6UXB8 463 aa9.72□□□□□ -0.85
LTN1-206ENST00000486427 FOXD4L3Q6VB84 417 aaPredicted RBP9.72□□□□□ -0.85
LTN1-206ENST00000486427 KCNK4Q9NYG8 393 aa9.72□□□□□ -0.85
LTN1-206ENST00000486427 USP21Q9UK80 565 aa9.72□□□□□ -0.85
LTN1-206ENST00000486427 FAM177BA6PVY3 158 aa9.71□□□□□ -0.86
LTN1-206ENST00000486427 CABP4P57796 275 aa9.71□□□□□ -0.86
LTN1-206ENST00000486427 SPRED3Q2MJR0 410 aa9.71□□□□□ -0.86
LTN1-206ENST00000486427 SETDB2Q96T68 719 aa9.71□□□□□ -0.86
LTN1-206ENST00000486427 EHD4Q9H223 541 aa9.71□□□□□ -0.86
LTN1-206ENST00000486427 GATA4P43694 442 aa9.7□□□□□ -0.86
LTN1-206ENST00000486427 FAM117BQ6P1L5 589 aa9.7□□□□□ -0.86
LTN1-206ENST00000486427 KLHDC7BQ96G42 594 aa9.7□□□□□ -0.86
LTN1-206ENST00000486427 A0A096LPE4 126 aa9.69□□□□□ -0.86
LTN1-206ENST00000486427 A0A1W2PPZ6 126 aa9.69□□□□□ -0.86
LTN1-206ENST00000486427 DDX3YO15523 660 aaKnown RBP9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms