RNA–Protein interactions for RNA: ENST00000486159.5

TMEM39A-208, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-208ENST00000486159 SNAP23O00161 211 aa11.95□□□□□ -0.5
TMEM39A-208ENST00000486159 DDX58O95786 925 aaKnown RBP11.95□□□□□ -0.5
TMEM39A-208ENST00000486159 KLRK1P26718 216 aa11.95□□□□□ -0.5
TMEM39A-208ENST00000486159 ECE1P42892 770 aa11.95□□□□□ -0.5
TMEM39A-208ENST00000486159 CASP7P55210 303 aa11.95□□□□□ -0.5
TMEM39A-208ENST00000486159 CCDC27Q2M243 656 aa11.95□□□□□ -0.5
TMEM39A-208ENST00000486159 KIF4BQ2VIQ3 1234 aa11.95□□□□□ -0.5
TMEM39A-208ENST00000486159 UBE3BQ7Z3V4 1068 aa11.95□□□□□ -0.5
TMEM39A-208ENST00000486159 KRT26Q7Z3Y9 468 aa11.95□□□□□ -0.5
TMEM39A-208ENST00000486159 ANKRD18AQ8IVF6 992 aa11.95□□□□□ -0.5
TMEM39A-208ENST00000486159 MINPP1Q9UNW1 487 aa11.95□□□□□ -0.5
TMEM39A-208ENST00000486159 FANCIQ9NVI1 1328 aa11.94□□□□□ -0.5
TMEM39A-208ENST00000486159 H7C1W4 665 aa11.94□□□□□ -0.5
TMEM39A-208ENST00000486159 HUNKP57058 714 aa11.94□□□□□ -0.5
TMEM39A-208ENST00000486159 EXOSC9Q06265 439 aaKnown RBP11.94□□□□□ -0.5
TMEM39A-208ENST00000486159 PRAMEF18Q5VWM3 479 aa11.94□□□□□ -0.5
TMEM39A-208ENST00000486159 SPDYE1Q8NFV5 336 aaPredicted RBP11.94□□□□□ -0.5
TMEM39A-208ENST00000486159 GMLQ99445 158 aa11.94□□□□□ -0.5
TMEM39A-208ENST00000486159 RCAN3Q9UKA8 241 aa11.94□□□□□ -0.5
TMEM39A-208ENST00000486159 ZNF646O15015 1829 aaPredicted RBP11.94□□□□□ -0.5
TMEM39A-208ENST00000486159 MYH3P11055 1940 aa11.94□□□□□ -0.5
TMEM39A-208ENST00000486159 CASP8AP2Q9UKL3 1982 aa11.93□□□□□ -0.5
TMEM39A-208ENST00000486159 CCDC85CA6NKD9 419 aa11.93□□□□□ -0.5
TMEM39A-208ENST00000486159 FAM155AB1AL88 458 aaPredicted RBP11.93□□□□□ -0.5
TMEM39A-208ENST00000486159 E9PSI1 815 aa11.93□□□□□ -0.5
TMEM39A-208ENST00000486159 F6X3S4 739 aa11.93□□□□□ -0.5
TMEM39A-208ENST00000486159 G3V3G9 751 aa11.93□□□□□ -0.5
TMEM39A-208ENST00000486159 VAMP4O75379 141 aa11.93□□□□□ -0.5
TMEM39A-208ENST00000486159 ATP2B4P23634 1241 aa11.93□□□□□ -0.5
TMEM39A-208ENST00000486159 RPS12P25398 132 aaKnown RBP11.93□□□□□ -0.5
TMEM39A-208ENST00000486159 FLIIQ13045 1269 aa11.93□□□□□ -0.5
TMEM39A-208ENST00000486159 SCARF1Q14162 830 aa11.93□□□□□ -0.5
TMEM39A-208ENST00000486159 GCKRQ14397 625 aa11.93□□□□□ -0.5
TMEM39A-208ENST00000486159 DCAF8Q5TAQ9 597 aa11.93□□□□□ -0.5
TMEM39A-208ENST00000486159 ANGEL2Q5VTE6 544 aaKnown RBP11.93□□□□□ -0.5
TMEM39A-208ENST00000486159 RSBN1LQ6PCB5 846 aaPredicted RBP11.93□□□□□ -0.5
TMEM39A-208ENST00000486159 MOB2Q70IA6 237 aa11.93□□□□□ -0.5
TMEM39A-208ENST00000486159 STK31Q9BXU1 1019 aa11.93□□□□□ -0.5
TMEM39A-208ENST00000486159 PPP4R2Q9NY27 417 aa11.93□□□□□ -0.5
TMEM39A-208ENST00000486159 GGA3Q9NZ52 723 aa11.93□□□□□ -0.5
TMEM39A-208ENST00000486159 PSME4Q14997 1843 aa11.93□□□□□ -0.5
TMEM39A-208ENST00000486159 XDHP47989 1333 aa11.92□□□□□ -0.5
TMEM39A-208ENST00000486159 MAP2K2P36507 400 aa11.92□□□□□ -0.5
TMEM39A-208ENST00000486159 WDR63Q8IWG1 891 aa11.92□□□□□ -0.5
TMEM39A-208ENST00000486159 TRMT2AQ8IZ69 625 aaKnown RBP11.92□□□□□ -0.5
TMEM39A-208ENST00000486159 DCPSQ96C86 337 aaKnown RBP11.92□□□□□ -0.5
TMEM39A-208ENST00000486159 GBA2Q9HCG7 927 aaPredicted RBP11.92□□□□□ -0.5
TMEM39A-208ENST00000486159 CCT4P50991 539 aaKnown RBP11.91□□□□□ -0.5
TMEM39A-208ENST00000486159 ZNF280AP59817 542 aaPredicted RBP11.91□□□□□ -0.5
TMEM39A-208ENST00000486159 SLFN5Q08AF3 891 aa11.91□□□□□ -0.5
TMEM39A-208ENST00000486159 FKBP5Q13451 457 aaPredicted RBP11.91□□□□□ -0.5
TMEM39A-208ENST00000486159 NBPF9Q3BBW0 867 aa11.91□□□□□ -0.5
TMEM39A-208ENST00000486159 FBXW7Q969H0 707 aa11.91□□□□□ -0.5
TMEM39A-208ENST00000486159 CDCA5Q96FF9 252 aa11.91□□□□□ -0.5
TMEM39A-208ENST00000486159 CDC5LQ99459 802 aaKnown RBP11.91□□□□□ -0.5
TMEM39A-208ENST00000486159 BSDC1Q9NW68 430 aaPredicted RBP11.91□□□□□ -0.5
TMEM39A-208ENST00000486159 USP17L3A6NCW0 530 aa11.9□□□□□ -0.5
TMEM39A-208ENST00000486159 USP17L4A6NCW7 530 aa11.9□□□□□ -0.5
TMEM39A-208ENST00000486159 TAF5LO75529 589 aa11.9□□□□□ -0.5
TMEM39A-208ENST00000486159 ITGA6P23229 1130 aa11.9□□□□□ -0.5
TMEM39A-208ENST00000486159 NEXNQ0ZGT2 675 aa11.9□□□□□ -0.5
TMEM39A-208ENST00000486159 EPHA10Q5JZY3 1008 aa11.9□□□□□ -0.5
TMEM39A-208ENST00000486159 DACT2Q5SW24 774 aa11.9□□□□□ -0.5
TMEM39A-208ENST00000486159 RGMBQ6NW40 437 aa11.9□□□□□ -0.5
TMEM39A-208ENST00000486159 USP17L1Q7RTZ2 530 aa11.9□□□□□ -0.5
TMEM39A-208ENST00000486159 AGBL3Q8NEM8 1001 aa11.9□□□□□ -0.5
TMEM39A-208ENST00000486159 HELBQ8NG08 1087 aaPredicted RBP11.9□□□□□ -0.5
TMEM39A-208ENST00000486159 DNAAF4Q8WXU2 420 aa11.9□□□□□ -0.5
TMEM39A-208ENST00000486159 HHIPL1Q96JK4 782 aa11.9□□□□□ -0.5
TMEM39A-208ENST00000486159 BEGAINQ9BUH8 593 aa11.9□□□□□ -0.5
TMEM39A-208ENST00000486159 MYOZ2Q9NPC6 264 aa11.9□□□□□ -0.5
TMEM39A-208ENST00000486159 IL16Q14005 1332 aa11.89□□□□□ -0.51
TMEM39A-208ENST00000486159 CSF1RP07333 972 aa11.89□□□□□ -0.51
TMEM39A-208ENST00000486159 USP17L8P0C7I0 530 aa11.89□□□□□ -0.51
TMEM39A-208ENST00000486159 HSP90B1P14625 803 aaKnown RBP11.89□□□□□ -0.51
TMEM39A-208ENST00000486159 FOXO4P98177 505 aa11.89□□□□□ -0.51
TMEM39A-208ENST00000486159 KIF23Q02241 960 aaPredicted RBP11.89□□□□□ -0.51
TMEM39A-208ENST00000486159 PODNQ7Z5L7 613 aa11.89□□□□□ -0.51
TMEM39A-208ENST00000486159 CDCA7LQ96GN5 454 aa11.89□□□□□ -0.51
TMEM39A-208ENST00000486159 ZNF594Q96JF6 807 aaPredicted RBP11.89□□□□□ -0.51
TMEM39A-208ENST00000486159 PLA2G12BQ9BX93 195 aa11.89□□□□□ -0.51
TMEM39A-208ENST00000486159 PCDHAC2Q9Y5I4 1007 aa11.89□□□□□ -0.51
TMEM39A-208ENST00000486159 SASH1O94885 1247 aa11.88□□□□□ -0.51
TMEM39A-208ENST00000486159 ZNF157P51786 506 aaPredicted RBP11.88□□□□□ -0.51
TMEM39A-208ENST00000486159 BRPF1P55201 1214 aaPredicted RBP11.88□□□□□ -0.51
TMEM39A-208ENST00000486159 RRP1P56182 461 aaKnown RBP11.88□□□□□ -0.51
TMEM39A-208ENST00000486159 SULF1Q8IWU6 871 aa11.88□□□□□ -0.51
TMEM39A-208ENST00000486159 C2orf69Q8N8R5 385 aa11.88□□□□□ -0.51
TMEM39A-208ENST00000486159 FZD1Q9UP38 647 aa11.88□□□□□ -0.51
TMEM39A-208ENST00000486159 MED23Q9ULK4 1368 aa11.88□□□□□ -0.51
TMEM39A-208ENST00000486159 ZNF804BA4D1E1 1349 aa11.87□□□□□ -0.51
TMEM39A-208ENST00000486159 UBE2Q2LH0YL09 131 aa11.87□□□□□ -0.51
TMEM39A-208ENST00000486159 IGHMBP2P38935 993 aaKnown RBP11.87□□□□□ -0.51
TMEM39A-208ENST00000486159 GTF2IP78347 998 aa11.87□□□□□ -0.51
TMEM39A-208ENST00000486159 CHRNDQ07001 517 aa11.87□□□□□ -0.51
TMEM39A-208ENST00000486159 BEND3Q5T5X7 828 aa11.87□□□□□ -0.51
TMEM39A-208ENST00000486159 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.87□□□□□ -0.51
TMEM39A-208ENST00000486159 LINS1Q8NG48 757 aa11.87□□□□□ -0.51
TMEM39A-208ENST00000486159 CSRNP1Q96S65 589 aa11.87□□□□□ -0.51
TMEM39A-208ENST00000486159 MCOLN1Q9GZU1 580 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms