RNA–Protein interactions for RNA: ENST00000486037.1

SND1-213, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-213ENST00000486037 COPS6Q7L5N1 327 aa12.9□□□□□ -0.34
SND1-213ENST00000486037 XAGE3Q8WTP9 111 aa12.9□□□□□ -0.34
SND1-213ENST00000486037 FAM89AQ96GI7 184 aa12.9□□□□□ -0.34
SND1-213ENST00000486037 ANGEL1Q9UNK9 670 aaKnown RBP12.9□□□□□ -0.34
SND1-213ENST00000486037 SSC5DA1L4H1 1573 aa12.9□□□□□ -0.35
SND1-213ENST00000486037 LAMB1P07942 1786 aa12.89□□□□□ -0.35
SND1-213ENST00000486037 MANSC4A6NHS7 340 aaPredicted RBP12.89□□□□□ -0.35
SND1-213ENST00000486037 GJA5P36382 358 aa12.89□□□□□ -0.35
SND1-213ENST00000486037 RTL5Q5HYW3 569 aaPredicted RBP12.89□□□□□ -0.35
SND1-213ENST00000486037 ARMC9Q7Z3E5 817 aa12.89□□□□□ -0.35
SND1-213ENST00000486037 PNISRQ8TF01 805 aaKnown RBP12.89□□□□□ -0.35
SND1-213ENST00000486037 NECTIN2Q92692 538 aa12.89□□□□□ -0.35
SND1-213ENST00000486037 WNK4Q96J92 1243 aa12.89□□□□□ -0.35
SND1-213ENST00000486037 PTPN18Q99952 460 aa12.89□□□□□ -0.35
SND1-213ENST00000486037 SEC31BQ9NQW1 1179 aa12.89□□□□□ -0.35
SND1-213ENST00000486037 PODXL2Q9NZ53 605 aa12.89□□□□□ -0.35
SND1-213ENST00000486037 ZSWIM8A7E2V4 1837 aa12.88□□□□□ -0.35
SND1-213ENST00000486037 SLC4A8Q2Y0W8 1093 aa12.88□□□□□ -0.35
SND1-213ENST00000486037 SHISA4Q96DD7 197 aa12.88□□□□□ -0.35
SND1-213ENST00000486037 LRCH3Q96II8 777 aa12.88□□□□□ -0.35
SND1-213ENST00000486037 SPTBN5Q9NRC6 3674 aaKnown RBP12.87□□□□□ -0.35
SND1-213ENST00000486037 USP17L3A6NCW0 530 aa12.87□□□□□ -0.35
SND1-213ENST00000486037 USP17L4A6NCW7 530 aa12.87□□□□□ -0.35
SND1-213ENST00000486037 G3V3G9 751 aa12.87□□□□□ -0.35
SND1-213ENST00000486037 NF2P35240 595 aa12.87□□□□□ -0.35
SND1-213ENST00000486037 MNX1P50219 401 aaPredicted RBP12.87□□□□□ -0.35
SND1-213ENST00000486037 RPS8P62241 208 aaKnown RBP12.87□□□□□ -0.35
SND1-213ENST00000486037 SP3Q02447 781 aa12.87□□□□□ -0.35
SND1-213ENST00000486037 HSP90AB3PQ58FF7 597 aa12.87□□□□□ -0.35
SND1-213ENST00000486037 DCAF8Q5TAQ9 597 aa12.87□□□□□ -0.35
SND1-213ENST00000486037 USP17L1Q7RTZ2 530 aa12.87□□□□□ -0.35
SND1-213ENST00000486037 SH3TC2Q8TF17 1288 aa12.87□□□□□ -0.35
SND1-213ENST00000486037 GGA1Q9UJY5 639 aa12.87□□□□□ -0.35
SND1-213ENST00000486037 ATP5J2-PTCD1G3V325 749 aa12.86□□□□□ -0.35
SND1-213ENST00000486037 SLC9C1Q4G0N8 1177 aa12.86□□□□□ -0.35
SND1-213ENST00000486037 SLC10A4Q96EP9 437 aa12.86□□□□□ -0.35
SND1-213ENST00000486037 PRKRIP1Q9H875 184 aaPredicted RBP12.86□□□□□ -0.35
SND1-213ENST00000486037 ANKIB1Q9P2G1 1089 aa12.86□□□□□ -0.35
SND1-213ENST00000486037 INHBEP58166 350 aa12.85□□□□□ -0.35
SND1-213ENST00000486037 DACT2Q5SW24 774 aa12.85□□□□□ -0.35
SND1-213ENST00000486037 DPF3Q92784 378 aa12.85□□□□□ -0.35
SND1-213ENST00000486037 ISCA1Q9BUE6 129 aa12.85□□□□□ -0.35
SND1-213ENST00000486037 FOXD4L1Q9NU39 408 aa12.85□□□□□ -0.35
SND1-213ENST00000486037 NUDCQ9Y266 331 aa12.85□□□□□ -0.35
SND1-213ENST00000486037 EYSQ5T1H1 3165 aa12.85□□□□□ -0.35
SND1-213ENST00000486037 ZBTB48P10074 688 aaPredicted RBP12.84□□□□□ -0.35
SND1-213ENST00000486037 MAP3K11Q16584 847 aa12.84□□□□□ -0.35
SND1-213ENST00000486037 CFAP53Q96M91 514 aa12.84□□□□□ -0.35
SND1-213ENST00000486037 ARHGAP39Q9C0H5 1083 aa12.84□□□□□ -0.35
SND1-213ENST00000486037 IRS4O14654 1257 aaPredicted RBP12.83□□□□□ -0.36
SND1-213ENST00000486037 MTFR1Q15390 333 aa12.83□□□□□ -0.36
SND1-213ENST00000486037 ZBED3Q96IU2 234 aaPredicted RBP12.83□□□□□ -0.36
SND1-213ENST00000486037 PCDHAC2Q9Y5I4 1007 aa12.83□□□□□ -0.36
SND1-213ENST00000486037 CCER2I3L3R5 266 aa12.82□□□□□ -0.36
SND1-213ENST00000486037 KRT24Q2M2I5 525 aa12.82□□□□□ -0.36
SND1-213ENST00000486037 PODNQ7Z5L7 613 aa12.82□□□□□ -0.36
SND1-213ENST00000486037 UBE2Q1Q7Z7E8 422 aa12.82□□□□□ -0.36
SND1-213ENST00000486037 NBPF11Q86T75 865 aa12.82□□□□□ -0.36
SND1-213ENST00000486037 FBXW7Q969H0 707 aa12.82□□□□□ -0.36
SND1-213ENST00000486037 CCDC85AQ96PX6 553 aaPredicted RBP12.82□□□□□ -0.36
SND1-213ENST00000486037 COL25A1Q9BXS0 654 aaPredicted RBP12.82□□□□□ -0.36
SND1-213ENST00000486037 TSPYL4Q9UJ04 414 aa12.82□□□□□ -0.36
SND1-213ENST00000486037 AOX1Q06278 1338 aa12.82□□□□□ -0.36
SND1-213ENST00000486037 TESPA1A2RU30 521 aaPredicted RBP12.81□□□□□ -0.36
SND1-213ENST00000486037 APOBEC3FQ8IUX4 373 aaKnown RBP12.81□□□□□ -0.36
SND1-213ENST00000486037 PLEKHF1Q96S99 279 aa12.81□□□□□ -0.36
SND1-213ENST00000486037 DEFB129Q9H1M3 183 aa12.81□□□□□ -0.36
SND1-213ENST00000486037 OTOFQ9HC10 1997 aa12.8□□□□□ -0.36
SND1-213ENST00000486037 PPP2R1AP30153 589 aa12.8□□□□□ -0.36
SND1-213ENST00000486037 MAPK8IP2Q13387 824 aaPredicted RBP12.8□□□□□ -0.36
SND1-213ENST00000486037 NFE2L2Q16236 605 aa12.8□□□□□ -0.36
SND1-213ENST00000486037 TXNRD3Q86VQ6 643 aa12.8□□□□□ -0.36
SND1-213ENST00000486037 MS4A4AQ96JQ5 239 aa12.8□□□□□ -0.36
SND1-213ENST00000486037 XDHP47989 1333 aa12.8□□□□□ -0.36
SND1-213ENST00000486037 ZBTB7BO15156 539 aaPredicted RBP12.79□□□□□ -0.36
SND1-213ENST00000486037 ECM2O94769 699 aaPredicted RBP12.79□□□□□ -0.36
SND1-213ENST00000486037 Q7L0L9 218 aa12.79□□□□□ -0.36
SND1-213ENST00000486037 KIAA0825Q8IV33 1275 aa12.79□□□□□ -0.36
SND1-213ENST00000486037 OGFOD1Q8N543 542 aa12.79□□□□□ -0.36
SND1-213ENST00000486037 PLBD2Q8NHP8 589 aa12.79□□□□□ -0.36
SND1-213ENST00000486037 BRI3BPQ8WY22 251 aa12.79□□□□□ -0.36
SND1-213ENST00000486037 JARID2Q92833 1246 aaPredicted RBP12.79□□□□□ -0.36
SND1-213ENST00000486037 CHPF2Q9P2E5 772 aa12.79□□□□□ -0.36
SND1-213ENST00000486037 USP2O75604 605 aaPredicted RBP12.78□□□□□ -0.36
SND1-213ENST00000486037 ATP2B4P23634 1241 aa12.78□□□□□ -0.36
SND1-213ENST00000486037 KLRK1P26718 216 aa12.78□□□□□ -0.36
SND1-213ENST00000486037 CTGFP29279 349 aa12.78□□□□□ -0.36
SND1-213ENST00000486037 RALBP1Q15311 655 aa12.78□□□□□ -0.36
SND1-213ENST00000486037 CCDC184Q52MB2 194 aa12.78□□□□□ -0.36
SND1-213ENST00000486037 NBPF12Q5TAG4 269 aaPredicted RBP12.78□□□□□ -0.36
SND1-213ENST00000486037 STRIP1Q5VSL9 837 aa12.78□□□□□ -0.36
SND1-213ENST00000486037 OTUD7BQ6GQQ9 843 aa12.78□□□□□ -0.36
SND1-213ENST00000486037 MED23Q9ULK4 1368 aa12.78□□□□□ -0.36
SND1-213ENST00000486037 COL1A1P02452 1464 aaPredicted RBP12.78□□□□□ -0.36
SND1-213ENST00000486037 LAMA2P24043 3122 aaKnown RBP12.77□□□□□ -0.37
SND1-213ENST00000486037 TAF1CQ15572 869 aaPredicted RBP12.77□□□□□ -0.37
SND1-213ENST00000486037 ANKRD13DQ6ZTN6 518 aa12.77□□□□□ -0.37
SND1-213ENST00000486037 FAM43AQ8N2R8 423 aa12.77□□□□□ -0.37
SND1-213ENST00000486037 OPTNQ96CV9 577 aa12.77□□□□□ -0.37
SND1-213ENST00000486037 ELP3Q9H9T3 547 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms