RNA–Protein interactions for RNA: ENST00000485867.5

SMC4-217, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 629 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-217ENST00000485867 KIAA1551Q9HCM1 1747 aa9.55□□□□□ -0.88
SMC4-217ENST00000485867 KIF13BQ9NQT8 1826 aa9.54□□□□□ -0.88
SMC4-217ENST00000485867 RNF144AP50876 292 aaPredicted RBP9.54□□□□□ -0.88
SMC4-217ENST00000485867 ERVK-9P63128 1117 aa9.54□□□□□ -0.88
SMC4-217ENST00000485867 RNFT1Q5M7Z0 435 aa9.54□□□□□ -0.88
SMC4-217ENST00000485867 LYSMD3Q7Z3D4 306 aa9.54□□□□□ -0.88
SMC4-217ENST00000485867 VWA5B2Q8N398 1253 aa9.54□□□□□ -0.88
SMC4-217ENST00000485867 DDX54Q8TDD1 881 aaKnown RBP9.54□□□□□ -0.88
SMC4-217ENST00000485867 SYTL4Q96C24 671 aaPredicted RBP9.54□□□□□ -0.88
SMC4-217ENST00000485867 PCNTO95613 3336 aa9.54□□□□□ -0.88
SMC4-217ENST00000485867 RGPD2P0DJD1 1756 aa9.53□□□□□ -0.88
SMC4-217ENST00000485867 ATP5J2-PTCD1G3V325 749 aa9.53□□□□□ -0.88
SMC4-217ENST00000485867 MCCD1P59942 119 aaPredicted RBP9.53□□□□□ -0.88
SMC4-217ENST00000485867 NBPF1Q3BBV0 1214 aa9.53□□□□□ -0.88
SMC4-217ENST00000485867 ANKRD24Q8TF21 1146 aa9.53□□□□□ -0.88
SMC4-217ENST00000485867 NMRK2Q9NPI5 230 aa9.53□□□□□ -0.88
SMC4-217ENST00000485867 SNRKQ9NRH2 765 aa9.53□□□□□ -0.88
SMC4-217ENST00000485867 NDUFB9Q9Y6M9 179 aa9.53□□□□□ -0.88
SMC4-217ENST00000485867 C4BP0C0L5 1744 aa9.53□□□□□ -0.88
SMC4-217ENST00000485867 PKD1L3Q7Z443 1732 aa9.53□□□□□ -0.88
SMC4-217ENST00000485867 N4BP2Q86UW6 1770 aaPredicted RBP9.52□□□□□ -0.88
SMC4-217ENST00000485867 BRCA1P38398 1863 aaKnown RBP9.52□□□□□ -0.89
SMC4-217ENST00000485867 RNF20Q5VTR2 975 aa9.52□□□□□ -0.89
SMC4-217ENST00000485867 SV2AQ7L0J3 742 aa9.52□□□□□ -0.89
SMC4-217ENST00000485867 USP31Q70CQ4 1352 aa9.51□□□□□ -0.89
SMC4-217ENST00000485867 USP47Q96K76 1375 aa9.51□□□□□ -0.89
SMC4-217ENST00000485867 CDC14CA4D256 554 aa9.51□□□□□ -0.89
SMC4-217ENST00000485867 TPRNQ4KMQ1 711 aa9.51□□□□□ -0.89
SMC4-217ENST00000485867 CC2D2BQ6DHV5 1058 aa9.51□□□□□ -0.89
SMC4-217ENST00000485867 FLAD1Q8NFF5 587 aa9.51□□□□□ -0.89
SMC4-217ENST00000485867 SCTRP47872 440 aa9.5□□□□□ -0.89
SMC4-217ENST00000485867 PRICKLE2Q7Z3G6 844 aa9.5□□□□□ -0.89
SMC4-217ENST00000485867 ZNF592Q92610 1267 aa9.5□□□□□ -0.89
SMC4-217ENST00000485867 CUEDC1Q9NWM3 386 aaPredicted RBP9.5□□□□□ -0.89
SMC4-217ENST00000485867 TNRC6CQ9HCJ0 1690 aaKnown RBP9.5□□□□□ -0.89
SMC4-217ENST00000485867 EVC2Q86UK5 1308 aa9.5□□□□□ -0.89
SMC4-217ENST00000485867 KTN1Q86UP2 1357 aaKnown RBP9.5□□□□□ -0.89
SMC4-217ENST00000485867 RAB3GAP2Q9H2M9 1393 aa9.5□□□□□ -0.89
SMC4-217ENST00000485867 ARFGEF1Q9Y6D6 1849 aa9.49□□□□□ -0.89
SMC4-217ENST00000485867 PXDNLA1KZ92 1463 aa9.49□□□□□ -0.89
SMC4-217ENST00000485867 A0A1W2PRU2 124 aa9.49□□□□□ -0.89
SMC4-217ENST00000485867 GPC1P35052 558 aa9.49□□□□□ -0.89
SMC4-217ENST00000485867 FSTL1Q12841 308 aa9.49□□□□□ -0.89
SMC4-217ENST00000485867 ZNF330Q9Y3S2 320 aaPredicted RBP9.49□□□□□ -0.89
SMC4-217ENST00000485867 ITGB4P16144 1822 aa9.49□□□□□ -0.89
SMC4-217ENST00000485867 MEGF6O75095 1541 aa9.48□□□□□ -0.89
SMC4-217ENST00000485867 APBB1O00213 710 aa9.48□□□□□ -0.89
SMC4-217ENST00000485867 HSPA1AP0DMV8 641 aaKnown RBP9.48□□□□□ -0.89
SMC4-217ENST00000485867 HSPA1BP0DMV9 641 aaKnown RBP9.48□□□□□ -0.89
SMC4-217ENST00000485867 SLURP2P0DP57 97 aa9.48□□□□□ -0.89
SMC4-217ENST00000485867 RHOQP17081 205 aa9.48□□□□□ -0.89
SMC4-217ENST00000485867 AMIGO3Q86WK7 504 aa9.48□□□□□ -0.89
SMC4-217ENST00000485867 C10orf71Q711Q0 1435 aa9.48□□□□□ -0.89
SMC4-217ENST00000485867 MAP2P11137 1827 aaKnown RBP9.47□□□□□ -0.89
SMC4-217ENST00000485867 SBF1O95248 1867 aa9.47□□□□□ -0.89
SMC4-217ENST00000485867 MEN1O00255 615 aa9.47□□□□□ -0.89
SMC4-217ENST00000485867 TRAK2O60296 914 aa9.47□□□□□ -0.89
SMC4-217ENST00000485867 ZNF385CQ66K41 422 aaPredicted RBP9.47□□□□□ -0.89
SMC4-217ENST00000485867 NME9Q86XW9 330 aa9.47□□□□□ -0.89
SMC4-217ENST00000485867 C16orf71Q8IYS4 520 aaPredicted RBP9.47□□□□□ -0.89
SMC4-217ENST00000485867 PCDHB11Q9Y5F2 797 aa9.47□□□□□ -0.89
SMC4-217ENST00000485867 PALLDQ8WX93 1383 aa9.47□□□□□ -0.89
SMC4-217ENST00000485867 PLEKHG2Q9H7P9 1386 aa9.47□□□□□ -0.89
SMC4-217ENST00000485867 NSD3Q9BZ95 1437 aa9.47□□□□□ -0.89
SMC4-217ENST00000485867 KCPQ6ZWJ8 1503 aa9.46□□□□□ -0.89
SMC4-217ENST00000485867 GSK3AP49840 483 aa9.46□□□□□ -0.9
SMC4-217ENST00000485867 CLN3Q13286 438 aa9.46□□□□□ -0.9
SMC4-217ENST00000485867 CYP2U1Q7Z449 544 aa9.46□□□□□ -0.9
SMC4-217ENST00000485867 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.46□□□□□ -0.9
SMC4-217ENST00000485867 ZCRB1Q8TBF4 217 aaKnown RBP9.46□□□□□ -0.9
SMC4-217ENST00000485867 OSBPL3Q9H4L5 887 aa9.46□□□□□ -0.9
SMC4-217ENST00000485867 SBNO2Q9Y2G9 1366 aa9.46□□□□□ -0.9
SMC4-217ENST00000485867 CD163L1Q9NR16 1453 aa9.46□□□□□ -0.9
SMC4-217ENST00000485867 HMGB2P26583 209 aaKnown RBP9.45□□□□□ -0.9
SMC4-217ENST00000485867 KCNMA1Q12791 1236 aa9.45□□□□□ -0.9
SMC4-217ENST00000485867 SMIM5Q71RC9 77 aa9.45□□□□□ -0.9
SMC4-217ENST00000485867 WHAMMQ8TF30 809 aa9.45□□□□□ -0.9
SMC4-217ENST00000485867 LTV1Q96GA3 475 aaPredicted RBP9.45□□□□□ -0.9
SMC4-217ENST00000485867 BCS1LQ9Y276 419 aa9.45□□□□□ -0.9
SMC4-217ENST00000485867 GAS6Q14393 721 aa9.44□□□□□ -0.9
SMC4-217ENST00000485867 ARHGAP27Q6ZUM4 889 aa9.44□□□□□ -0.9
SMC4-217ENST00000485867 IP6K1Q92551 441 aa9.44□□□□□ -0.9
SMC4-217ENST00000485867 GRIP2Q9C0E4 1043 aa9.44□□□□□ -0.9
SMC4-217ENST00000485867 ADAMTS8Q9UP79 889 aa9.44□□□□□ -0.9
SMC4-217ENST00000485867 SSFA2P28290 1259 aa9.43□□□□□ -0.9
SMC4-217ENST00000485867 C9orf131Q5VYM1 1079 aa9.43□□□□□ -0.9
SMC4-217ENST00000485867 SVOPQ8N4V2 548 aa9.43□□□□□ -0.9
SMC4-217ENST00000485867 ZNF837Q96EG3 531 aaPredicted RBP9.43□□□□□ -0.9
SMC4-217ENST00000485867 NLRP3Q96P20 1036 aa9.43□□□□□ -0.9
SMC4-217ENST00000485867 ARHGEF10LQ9HCE6 1279 aa9.43□□□□□ -0.9
SMC4-217ENST00000485867 CEP126Q9P2H0 1117 aa9.43□□□□□ -0.9
SMC4-217ENST00000485867 TBC1D2BQ9UPU7 963 aa9.43□□□□□ -0.9
SMC4-217ENST00000485867 C4AP0C0L4 1744 aa9.42□□□□□ -0.9
SMC4-217ENST00000485867 KDM2BQ8NHM5 1336 aa9.42□□□□□ -0.9
SMC4-217ENST00000485867 A0A0G2JLW4 131 aa9.42□□□□□ -0.9
SMC4-217ENST00000485867 TGFB2P61812 414 aa9.42□□□□□ -0.9
SMC4-217ENST00000485867 POU4F2Q12837 409 aa9.42□□□□□ -0.9
SMC4-217ENST00000485867 TRIM22Q8IYM9 498 aa9.42□□□□□ -0.9
SMC4-217ENST00000485867 SMC1BQ8NDV3 1235 aa9.42□□□□□ -0.9
SMC4-217ENST00000485867 GMCL1Q96IK5 515 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms