RNA–Protein interactions for RNA: ENST00000485275.2

LRIF1-202, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRIF1, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-202ENST00000485275 ANKRD2Q9GZV1 360 aa17.75■□□□□ 0.43
LRIF1-202ENST00000485275 ATP6V0A2Q9Y487 856 aa17.75■□□□□ 0.43
LRIF1-202ENST00000485275 MYO5AQ9Y4I1 1855 aaKnown RBP17.75■□□□□ 0.43
LRIF1-202ENST00000485275 ZNF804BA4D1E1 1349 aa17.74■□□□□ 0.43
LRIF1-202ENST00000485275 XDHP47989 1333 aa17.74■□□□□ 0.43
LRIF1-202ENST00000485275 TRIM6-TRIM34B2RNG4 842 aa17.74■□□□□ 0.43
LRIF1-202ENST00000485275 MCAMP43121 646 aa17.74■□□□□ 0.43
LRIF1-202ENST00000485275 BCAMP50895 628 aa17.74■□□□□ 0.43
LRIF1-202ENST00000485275 RILPL2Q969X0 211 aa17.74■□□□□ 0.43
LRIF1-202ENST00000485275 HAUS7Q99871 368 aa17.74■□□□□ 0.43
LRIF1-202ENST00000485275 TSHZ2Q9NRE2 1034 aa17.74■□□□□ 0.43
LRIF1-202ENST00000485275 A0A0G2JLW4 131 aa17.74■□□□□ 0.43
LRIF1-202ENST00000485275 IFIT1P09914 478 aaKnown RBP17.74■□□□□ 0.43
LRIF1-202ENST00000485275 DPEP1P16444 411 aa17.74■□□□□ 0.43
LRIF1-202ENST00000485275 ALDH1B1P30837 517 aa17.74■□□□□ 0.43
LRIF1-202ENST00000485275 GYG1P46976 350 aa17.74■□□□□ 0.43
LRIF1-202ENST00000485275 ARID4AP29374 1257 aaPredicted RBP17.73■□□□□ 0.43
LRIF1-202ENST00000485275 TTC39AQ5SRH9 613 aa17.73■□□□□ 0.43
LRIF1-202ENST00000485275 SP8Q8IXZ3 490 aa17.73■□□□□ 0.43
LRIF1-202ENST00000485275 DNAJC2Q99543 621 aaKnown RBP17.73■□□□□ 0.43
LRIF1-202ENST00000485275 ANKIB1Q9P2G1 1089 aa17.73■□□□□ 0.43
LRIF1-202ENST00000485275 NSFL1CQ9UNZ2 370 aaKnown RBP17.73■□□□□ 0.43
LRIF1-202ENST00000485275 MYH13Q9UKX3 1938 aa17.72■□□□□ 0.43
LRIF1-202ENST00000485275 CDC45O75419 566 aa17.72■□□□□ 0.43
LRIF1-202ENST00000485275 CHGBP05060 677 aa17.72■□□□□ 0.43
LRIF1-202ENST00000485275 CCDC158Q5M9N0 1113 aa17.72■□□□□ 0.43
LRIF1-202ENST00000485275 GORABQ5T7V8 394 aa17.72■□□□□ 0.43
LRIF1-202ENST00000485275 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.72■□□□□ 0.43
LRIF1-202ENST00000485275 C7orf43Q8WVR3 580 aa17.72■□□□□ 0.43
LRIF1-202ENST00000485275 ZNF512BQ96KM6 892 aaPredicted RBP17.72■□□□□ 0.43
LRIF1-202ENST00000485275 IL25Q9H293 177 aa17.72■□□□□ 0.43
LRIF1-202ENST00000485275 ANTXR1Q9H6X2 564 aa17.72■□□□□ 0.43
LRIF1-202ENST00000485275 SNRKQ9NRH2 765 aa17.72■□□□□ 0.43
LRIF1-202ENST00000485275 PODXL2Q9NZ53 605 aa17.72■□□□□ 0.43
LRIF1-202ENST00000485275 POLLQ9UGP5 575 aa17.72■□□□□ 0.43
LRIF1-202ENST00000485275 DOCK2Q92608 1830 aa17.71■□□□□ 0.43
LRIF1-202ENST00000485275 RASGRF1Q13972 1273 aa17.71■□□□□ 0.43
LRIF1-202ENST00000485275 TMC4Q7Z404 712 aa17.71■□□□□ 0.43
LRIF1-202ENST00000485275 FAM84BQ96KN1 310 aaPredicted RBP17.71■□□□□ 0.43
LRIF1-202ENST00000485275 KCNJ4P48050 445 aa17.71■□□□□ 0.43
LRIF1-202ENST00000485275 CNTROBQ8N137 903 aa17.71■□□□□ 0.43
LRIF1-202ENST00000485275 UTRNP46939 3433 aa17.7■□□□□ 0.42
LRIF1-202ENST00000485275 GOLIM4O00461 696 aa17.7■□□□□ 0.42
LRIF1-202ENST00000485275 UFL1O94874 794 aa17.7■□□□□ 0.42
LRIF1-202ENST00000485275 ZAP70P43403 619 aa17.7■□□□□ 0.42
LRIF1-202ENST00000485275 TBC1D16Q8TBP0 767 aa17.7■□□□□ 0.42
LRIF1-202ENST00000485275 EVI5LQ96CN4 794 aa17.7■□□□□ 0.42
LRIF1-202ENST00000485275 HMG20BQ9P0W2 317 aa17.7■□□□□ 0.42
LRIF1-202ENST00000485275 IQSEC3Q9UPP2 1182 aaPredicted RBP17.7■□□□□ 0.42
LRIF1-202ENST00000485275 LEMD3Q9Y2U8 911 aa17.7■□□□□ 0.42
LRIF1-202ENST00000485275 CHMLP26374 656 aa17.69■□□□□ 0.42
LRIF1-202ENST00000485275 FBXO33Q7Z6M2 555 aa17.69■□□□□ 0.42
LRIF1-202ENST00000485275 CNKSR1Q969H4 720 aa17.69■□□□□ 0.42
LRIF1-202ENST00000485275 PAG1Q9NWQ8 432 aa17.69■□□□□ 0.42
LRIF1-202ENST00000485275 ZNF219Q9P2Y4 722 aaPredicted RBP17.69■□□□□ 0.42
LRIF1-202ENST00000485275 MYH7P12883 1935 aa17.69■□□□□ 0.42
LRIF1-202ENST00000485275 GGA1Q9UJY5 639 aa17.68■□□□□ 0.42
LRIF1-202ENST00000485275 WWC3Q9ULE0 1092 aa17.68■□□□□ 0.42
LRIF1-202ENST00000485275 CYP2E1P05181 493 aaPredicted RBP17.68■□□□□ 0.42
LRIF1-202ENST00000485275 FKBP4Q02790 459 aaKnown RBP eCLIP17.68■□□□□ 0.42
LRIF1-202ENST00000485275 PPP1R1BQ9UD71 204 aaPredicted RBP17.68■□□□□ 0.42
LRIF1-202ENST00000485275 MED23Q9ULK4 1368 aa17.67■□□□□ 0.42
LRIF1-202ENST00000485275 UQCRFS1P1P0C7P4 283 aa17.67■□□□□ 0.42
LRIF1-202ENST00000485275 ATP2B4P23634 1241 aa17.67■□□□□ 0.42
LRIF1-202ENST00000485275 TGFB2P61812 414 aa17.67■□□□□ 0.42
LRIF1-202ENST00000485275 SLFNL1Q499Z3 407 aa17.67■□□□□ 0.42
LRIF1-202ENST00000485275 C15orf52Q6ZUT6 534 aaKnown RBP17.67■□□□□ 0.42
LRIF1-202ENST00000485275 CHD4Q14839 1912 aa17.67■□□□□ 0.42
LRIF1-202ENST00000485275 KLHL34Q8N239 644 aa17.66■□□□□ 0.42
LRIF1-202ENST00000485275 MPNDQ8N594 471 aa17.66■□□□□ 0.42
LRIF1-202ENST00000485275 TTLL6Q8N841 843 aa17.66■□□□□ 0.42
LRIF1-202ENST00000485275 KBTBD3Q8NAB2 608 aa17.66■□□□□ 0.42
LRIF1-202ENST00000485275 SPATA5Q8NB90 893 aa17.66■□□□□ 0.42
LRIF1-202ENST00000485275 NLGN2Q8NFZ4 835 aa17.66■□□□□ 0.42
LRIF1-202ENST00000485275 FSD1Q9BTV5 496 aa17.66■□□□□ 0.42
LRIF1-202ENST00000485275 SPON1Q9HCB6 807 aa17.66■□□□□ 0.42
LRIF1-202ENST00000485275 PIH1D3Q9NQM4 214 aaKnown RBP17.66■□□□□ 0.42
LRIF1-202ENST00000485275 CD2APQ9Y5K6 639 aa17.66■□□□□ 0.42
LRIF1-202ENST00000485275 C21orf2O43822 256 aa17.66■□□□□ 0.42
LRIF1-202ENST00000485275 RFX7Q2KHR2 1363 aa17.65■□□□□ 0.42
LRIF1-202ENST00000485275 ZNF646O15015 1829 aaPredicted RBP17.65■□□□□ 0.42
LRIF1-202ENST00000485275 HIBADHP31937 336 aaKnown RBP17.65■□□□□ 0.42
LRIF1-202ENST00000485275 CAVIN4Q5BKX8 364 aa17.65■□□□□ 0.42
LRIF1-202ENST00000485275 DPP8Q6V1X1 898 aaPredicted RBP17.65■□□□□ 0.42
LRIF1-202ENST00000485275 FAM227BQ96M60 508 aa17.65■□□□□ 0.42
LRIF1-202ENST00000485275 A0A0D9SFI3 127 aa17.64■□□□□ 0.41
LRIF1-202ENST00000485275 C6orf229H3BNL8 230 aa17.64■□□□□ 0.41
LRIF1-202ENST00000485275 MFAP1P55081 439 aaKnown RBP17.64■□□□□ 0.41
LRIF1-202ENST00000485275 ESYT1Q9BSJ8 1104 aa17.64■□□□□ 0.41
LRIF1-202ENST00000485275 COL4A5P29400 1685 aa17.63■□□□□ 0.41
LRIF1-202ENST00000485275 NMIQ13287 307 aaPredicted RBP17.63■□□□□ 0.41
LRIF1-202ENST00000485275 CWC27Q6UX04 472 aaKnown RBP17.63■□□□□ 0.41
LRIF1-202ENST00000485275 VPS37DQ86XT2 251 aa17.63■□□□□ 0.41
LRIF1-202ENST00000485275 RTFDC1Q9BY42 306 aaPredicted RBP17.63■□□□□ 0.41
LRIF1-202ENST00000485275 JAG2Q9Y219 1238 aa17.63■□□□□ 0.41
LRIF1-202ENST00000485275 FER1L6Q2WGJ9 1857 aa17.62■□□□□ 0.41
LRIF1-202ENST00000485275 RIMBP2O15034 1052 aa17.62■□□□□ 0.41
LRIF1-202ENST00000485275 TDRD7Q8NHU6 1098 aaKnown RBP17.62■□□□□ 0.41
LRIF1-202ENST00000485275 PIM2Q9P1W9 311 aa17.62■□□□□ 0.41
LRIF1-202ENST00000485275 SCN9AQ15858 1988 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms