RNA–Protein interactions for RNA: ENST00000485063.1

MACF1-220, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 3

Gene MACF1, Length 438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-220ENST00000485063 CNNM1Q9NRU3 951 aa9.79□□□□□ -0.84
MACF1-220ENST00000485063 BMP2KQ9NSY1 1161 aaPredicted RBP9.79□□□□□ -0.84
MACF1-220ENST00000485063 ZNRF3Q9ULT6 936 aa9.79□□□□□ -0.84
MACF1-220ENST00000485063 MINPP1Q9UNW1 487 aa9.79□□□□□ -0.84
MACF1-220ENST00000485063 LEMD3Q9Y2U8 911 aa9.79□□□□□ -0.84
MACF1-220ENST00000485063 COL4A1P02462 1669 aa9.79□□□□□ -0.84
MACF1-220ENST00000485063 SCN4AP35499 1836 aa9.79□□□□□ -0.84
MACF1-220ENST00000485063 LTBP1Q14766 1721 aa9.79□□□□□ -0.84
MACF1-220ENST00000485063 TNIP1Q15025 636 aa9.78□□□□□ -0.84
MACF1-220ENST00000485063 RABL6Q3YEC7 729 aaPredicted RBP9.78□□□□□ -0.84
MACF1-220ENST00000485063 SLC51AQ86UW1 340 aa9.78□□□□□ -0.84
MACF1-220ENST00000485063 DZIP1LQ8IYY4 767 aaKnown RBP9.78□□□□□ -0.84
MACF1-220ENST00000485063 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.78□□□□□ -0.84
MACF1-220ENST00000485063 POLLQ9UGP5 575 aa9.78□□□□□ -0.84
MACF1-220ENST00000485063 RCAN3Q9UKA8 241 aa9.78□□□□□ -0.84
MACF1-220ENST00000485063 GJA3Q9Y6H8 435 aa9.78□□□□□ -0.84
MACF1-220ENST00000485063 DUOX1Q9NRD9 1551 aa9.78□□□□□ -0.84
MACF1-220ENST00000485063 UTRNP46939 3433 aa9.78□□□□□ -0.84
MACF1-220ENST00000485063 KIF3CO14782 793 aa9.77□□□□□ -0.85
MACF1-220ENST00000485063 TOMM70O94826 608 aa9.77□□□□□ -0.85
MACF1-220ENST00000485063 POTEJP0CG39 1038 aa9.77□□□□□ -0.85
MACF1-220ENST00000485063 LMOD1P29536 600 aaPredicted RBP9.77□□□□□ -0.85
MACF1-220ENST00000485063 CHRNDQ07001 517 aa9.77□□□□□ -0.85
MACF1-220ENST00000485063 CIAPIN1Q6FI81 312 aa9.77□□□□□ -0.85
MACF1-220ENST00000485063 KAZALD1Q96I82 304 aa9.77□□□□□ -0.85
MACF1-220ENST00000485063 ZNF594Q96JF6 807 aaPredicted RBP9.77□□□□□ -0.85
MACF1-220ENST00000485063 ZNF804BA4D1E1 1349 aa9.77□□□□□ -0.85
MACF1-220ENST00000485063 ZNF541Q9H0D2 1346 aa9.77□□□□□ -0.85
MACF1-220ENST00000485063 A0A1B0GUL6 1792 aa9.76□□□□□ -0.85
MACF1-220ENST00000485063 PLIN1O60240 522 aa9.76□□□□□ -0.85
MACF1-220ENST00000485063 ECE2O60344 883 aa9.76□□□□□ -0.85
MACF1-220ENST00000485063 C1QTNF8P60827 252 aa9.76□□□□□ -0.85
MACF1-220ENST00000485063 DOK7Q18PE1 504 aa9.76□□□□□ -0.85
MACF1-220ENST00000485063 ITPRIPQ8IWB1 547 aa9.76□□□□□ -0.85
MACF1-220ENST00000485063 TMEM57Q8N5G2 664 aa9.76□□□□□ -0.85
MACF1-220ENST00000485063 MEIS3Q99687 375 aa9.76□□□□□ -0.85
MACF1-220ENST00000485063 DBNDD1Q9H9R9 158 aa9.76□□□□□ -0.85
MACF1-220ENST00000485063 HACL1Q9UJ83 578 aa9.76□□□□□ -0.85
MACF1-220ENST00000485063 LRRFIP2Q9Y608 721 aaKnown RBP9.76□□□□□ -0.85
MACF1-220ENST00000485063 MROH5Q6ZUA9 1318 aa9.76□□□□□ -0.85
MACF1-220ENST00000485063 MED23Q9ULK4 1368 aa9.75□□□□□ -0.85
MACF1-220ENST00000485063 COL4A5P29400 1685 aa9.75□□□□□ -0.85
MACF1-220ENST00000485063 RAD17O75943 681 aa9.75□□□□□ -0.85
MACF1-220ENST00000485063 GNAI2P04899 355 aa9.75□□□□□ -0.85
MACF1-220ENST00000485063 CXCL9Q07325 125 aa9.75□□□□□ -0.85
MACF1-220ENST00000485063 LCE2DQ5TA82 110 aaPredicted RBP9.75□□□□□ -0.85
MACF1-220ENST00000485063 PODNQ7Z5L7 613 aa9.75□□□□□ -0.85
MACF1-220ENST00000485063 ANKRD44Q8N8A2 993 aa9.75□□□□□ -0.85
MACF1-220ENST00000485063 L3MBTL3Q96JM7 780 aaPredicted RBP9.75□□□□□ -0.85
MACF1-220ENST00000485063 GPR101Q96P66 508 aaPredicted RBP9.75□□□□□ -0.85
MACF1-220ENST00000485063 CHMP4BQ9H444 224 aaKnown RBP9.75□□□□□ -0.85
MACF1-220ENST00000485063 TNNQ9UQP3 1299 aa9.75□□□□□ -0.85
MACF1-220ENST00000485063 TAF5LO75529 589 aa9.74□□□□□ -0.85
MACF1-220ENST00000485063 METTL24Q5JXM2 366 aa9.74□□□□□ -0.85
MACF1-220ENST00000485063 ZNF804AQ7Z570 1209 aa9.74□□□□□ -0.85
MACF1-220ENST00000485063 PNMA8AQ86V59 439 aaPredicted RBP9.74□□□□□ -0.85
MACF1-220ENST00000485063 SMC1BQ8NDV3 1235 aa9.74□□□□□ -0.85
MACF1-220ENST00000485063 HELBQ8NG08 1087 aaPredicted RBP9.74□□□□□ -0.85
MACF1-220ENST00000485063 RBM46Q8TBY0 533 aaKnown RBP9.74□□□□□ -0.85
MACF1-220ENST00000485063 COA1Q9GZY4 146 aa9.74□□□□□ -0.85
MACF1-220ENST00000485063 FBXO3Q9UK99 471 aa9.74□□□□□ -0.85
MACF1-220ENST00000485063 PSME4Q14997 1843 aa9.74□□□□□ -0.85
MACF1-220ENST00000485063 YDJCA8MPS7 323 aa9.73□□□□□ -0.85
MACF1-220ENST00000485063 POTECB2RU33 542 aa9.73□□□□□ -0.85
MACF1-220ENST00000485063 EPHX2P34913 555 aa9.73□□□□□ -0.85
MACF1-220ENST00000485063 FSTL1Q12841 308 aa9.73□□□□□ -0.85
MACF1-220ENST00000485063 UBE4AQ14139 1066 aa9.73□□□□□ -0.85
MACF1-220ENST00000485063 EAPPQ56P03 285 aaPredicted RBP9.73□□□□□ -0.85
MACF1-220ENST00000485063 FBXW7Q969H0 707 aa9.73□□□□□ -0.85
MACF1-220ENST00000485063 PUS3Q9BZE2 481 aaKnown RBP9.73□□□□□ -0.85
MACF1-220ENST00000485063 TAF1DQ9H5J8 278 aaPredicted RBP9.73□□□□□ -0.85
MACF1-220ENST00000485063 TRPC6Q9Y210 931 aa9.73□□□□□ -0.85
MACF1-220ENST00000485063 RIPOR2Q9Y4F9 1068 aa9.73□□□□□ -0.85
MACF1-220ENST00000485063 USP17L3A6NCW0 530 aa9.72□□□□□ -0.85
MACF1-220ENST00000485063 USP17L4A6NCW7 530 aa9.72□□□□□ -0.85
MACF1-220ENST00000485063 H7C1D1 291 aa9.72□□□□□ -0.85
MACF1-220ENST00000485063 EYA2O00167 538 aa9.72□□□□□ -0.85
MACF1-220ENST00000485063 PSMD14O00487 310 aa9.72□□□□□ -0.85
MACF1-220ENST00000485063 SRGAP3O43295 1099 aa9.72□□□□□ -0.85
MACF1-220ENST00000485063 RPS12P25398 132 aaKnown RBP9.72□□□□□ -0.85
MACF1-220ENST00000485063 PTPN12Q05209 780 aaKnown RBP9.72□□□□□ -0.85
MACF1-220ENST00000485063 LRRC24Q50LG9 513 aa9.72□□□□□ -0.85
MACF1-220ENST00000485063 CAVIN4Q5BKX8 364 aa9.72□□□□□ -0.85
MACF1-220ENST00000485063 USP17L1Q7RTZ2 530 aa9.72□□□□□ -0.85
MACF1-220ENST00000485063 KLHDC4Q8TBB5 520 aa9.72□□□□□ -0.85
MACF1-220ENST00000485063 GPRC5DQ9NZD1 345 aa9.72□□□□□ -0.85
MACF1-220ENST00000485063 DDX19BQ9UMR2 479 aa9.72□□□□□ -0.85
MACF1-220ENST00000485063 TTLL13PA6NNM8 815 aa9.71□□□□□ -0.86
MACF1-220ENST00000485063 CIAO1O76071 339 aa9.71□□□□□ -0.86
MACF1-220ENST00000485063 PDE8BO95263 885 aa9.71□□□□□ -0.86
MACF1-220ENST00000485063 VIL1P09327 827 aaKnown RBP9.71□□□□□ -0.86
MACF1-220ENST00000485063 IFIT1P09914 478 aaKnown RBP9.71□□□□□ -0.86
MACF1-220ENST00000485063 IL15P40933 162 aaPredicted RBP9.71□□□□□ -0.86
MACF1-220ENST00000485063 RFX5P48382 616 aaPredicted RBP9.71□□□□□ -0.86
MACF1-220ENST00000485063 GMPSP49915 693 aaPredicted RBP9.71□□□□□ -0.86
MACF1-220ENST00000485063 SCNN1DP51172 638 aa9.71□□□□□ -0.86
MACF1-220ENST00000485063 NUBP1P53384 320 aa9.71□□□□□ -0.86
MACF1-220ENST00000485063 MTX1Q13505 466 aa9.71□□□□□ -0.86
MACF1-220ENST00000485063 IER5LQ5T953 404 aa9.71□□□□□ -0.86
MACF1-220ENST00000485063 C15orf52Q6ZUT6 534 aaKnown RBP9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms