RNA–Protein interactions for RNA: ENST00000484867.1

RC3H1-205, Transcript of ring finger and CCCH-type domains 1, humanhuman

TSL 3

Gene RC3H1, Length 368 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-205ENST00000484867 SMNDC1O75940 238 aaKnown RBP eCLIP8.51□□□□□ -1.05
RC3H1-205ENST00000484867 ELOAQ14241 798 aaKnown RBP8.51□□□□□ -1.05
RC3H1-205ENST00000484867 UTP4Q969X6 686 aaKnown RBP8.51□□□□□ -1.05
RC3H1-205ENST00000484867 DBNDD2Q9BQY9 259 aa8.51□□□□□ -1.05
RC3H1-205ENST00000484867 PBX4Q9BYU1 374 aa8.51□□□□□ -1.05
RC3H1-205ENST00000484867 ZBTB39O15060 712 aa8.5□□□□□ -1.05
RC3H1-205ENST00000484867 CYP2E1P05181 493 aaPredicted RBP8.5□□□□□ -1.05
RC3H1-205ENST00000484867 FAM20CQ8IXL6 584 aa8.5□□□□□ -1.05
RC3H1-205ENST00000484867 KLHDC7BQ96G42 594 aa8.5□□□□□ -1.05
RC3H1-205ENST00000484867 POP1Q99575 1024 aaKnown RBP8.5□□□□□ -1.05
RC3H1-205ENST00000484867 SH2B1Q9NRF2 756 aaPredicted RBP8.5□□□□□ -1.05
RC3H1-205ENST00000484867 RFX1P22670 979 aa8.49□□□□□ -1.05
RC3H1-205ENST00000484867 ZAP70P43403 619 aa8.49□□□□□ -1.05
RC3H1-205ENST00000484867 SRPK2P78362 688 aaKnown RBP8.49□□□□□ -1.05
RC3H1-205ENST00000484867 DUOXA2Q1HG44 320 aa8.49□□□□□ -1.05
RC3H1-205ENST00000484867 CLEC10AQ8IUN9 316 aa8.49□□□□□ -1.05
RC3H1-205ENST00000484867 UBASH3BQ8TF42 649 aa8.49□□□□□ -1.05
RC3H1-205ENST00000484867 SPACA7Q96KW9 195 aa8.49□□□□□ -1.05
RC3H1-205ENST00000484867 FAM83CQ9BQN1 747 aa8.49□□□□□ -1.05
RC3H1-205ENST00000484867 FAM13BQ9NYF5 915 aa8.49□□□□□ -1.05
RC3H1-205ENST00000484867 CDC25BP30305 580 aa8.48□□□□□ -1.05
RC3H1-205ENST00000484867 TTC39BQ5VTQ0 682 aaPredicted RBP8.48□□□□□ -1.05
RC3H1-205ENST00000484867 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.48□□□□□ -1.05
RC3H1-205ENST00000484867 ABI2Q9NYB9 513 aaPredicted RBP8.48□□□□□ -1.05
RC3H1-205ENST00000484867 CXXC1Q9P0U4 656 aaPredicted RBP8.48□□□□□ -1.05
RC3H1-205ENST00000484867 SCNN1AP37088 669 aa8.47□□□□□ -1.05
RC3H1-205ENST00000484867 GRIK1P39086 918 aa8.47□□□□□ -1.05
RC3H1-205ENST00000484867 STK32AQ8WU08 396 aa8.47□□□□□ -1.05
RC3H1-205ENST00000484867 WNT8BQ93098 351 aa8.47□□□□□ -1.05
RC3H1-205ENST00000484867 SEC31BQ9NQW1 1179 aa8.47□□□□□ -1.05
RC3H1-205ENST00000484867 FNDC3AQ9Y2H6 1198 aaKnown RBP8.47□□□□□ -1.05
RC3H1-205ENST00000484867 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.47□□□□□ -1.05
RC3H1-205ENST00000484867 NFKBIEO00221 500 aa8.46□□□□□ -1.06
RC3H1-205ENST00000484867 YBX3P16989 372 aaKnown RBP eCLIP8.46□□□□□ -1.06
RC3H1-205ENST00000484867 PTPRAP18433 802 aa8.46□□□□□ -1.06
RC3H1-205ENST00000484867 PREPP48147 710 aa8.46□□□□□ -1.06
RC3H1-205ENST00000484867 SHKBP1Q8TBC3 707 aa8.46□□□□□ -1.06
RC3H1-205ENST00000484867 GPR152Q8TDT2 470 aa8.46□□□□□ -1.06
RC3H1-205ENST00000484867 ADGRE2Q9UHX3 823 aa8.46□□□□□ -1.06
RC3H1-205ENST00000484867 ANKRD34AQ69YU3 496 aa8.45□□□□□ -1.06
RC3H1-205ENST00000484867 ZMYND15Q9H091 742 aa8.45□□□□□ -1.06
RC3H1-205ENST00000484867 STIM2Q9P246 746 aa8.45□□□□□ -1.06
RC3H1-205ENST00000484867 SALL4Q9UJQ4 1053 aa8.45□□□□□ -1.06
RC3H1-205ENST00000484867 H3BRJ5 948 aa8.44□□□□□ -1.06
RC3H1-205ENST00000484867 BMP3P12645 472 aa8.44□□□□□ -1.06
RC3H1-205ENST00000484867 PIP4K2BP78356 416 aa8.44□□□□□ -1.06
RC3H1-205ENST00000484867 NAA30Q147X3 362 aaPredicted RBP8.44□□□□□ -1.06
RC3H1-205ENST00000484867 PDE12Q6L8Q7 609 aaKnown RBP8.44□□□□□ -1.06
RC3H1-205ENST00000484867 FAM117BQ6P1L5 589 aa8.44□□□□□ -1.06
RC3H1-205ENST00000484867 BEND4Q6ZU67 534 aa8.44□□□□□ -1.06
RC3H1-205ENST00000484867 ELP3Q9H9T3 547 aa8.44□□□□□ -1.06
RC3H1-205ENST00000484867 OSGEPQ9NPF4 335 aa8.44□□□□□ -1.06
RC3H1-205ENST00000484867 TMEM63CQ9P1W3 806 aa8.44□□□□□ -1.06
RC3H1-205ENST00000484867 CNTN3Q9P232 1028 aa8.44□□□□□ -1.06
RC3H1-205ENST00000484867 RNF114Q9Y508 228 aa8.44□□□□□ -1.06
RC3H1-205ENST00000484867 ARID1BQ8NFD5 2236 aaPredicted RBP8.44□□□□□ -1.06
RC3H1-205ENST00000484867 WNT11O96014 354 aa8.43□□□□□ -1.06
RC3H1-205ENST00000484867 MKNK1Q9BUB5 465 aa8.43□□□□□ -1.06
RC3H1-205ENST00000484867 ZNF777Q9ULD5 760 aaPredicted RBP8.43□□□□□ -1.06
RC3H1-205ENST00000484867 MEGF11A6BM72 1044 aa8.42□□□□□ -1.06
RC3H1-205ENST00000484867 HOXA10P31260 410 aaPredicted RBP8.42□□□□□ -1.06
RC3H1-205ENST00000484867 SLAIN2Q9P270 581 aa8.42□□□□□ -1.06
RC3H1-205ENST00000484867 HIF3AQ9Y2N7 669 aa8.42□□□□□ -1.06
RC3H1-205ENST00000484867 ACPPP15309 386 aa8.41□□□□□ -1.06
RC3H1-205ENST00000484867 XKR5Q6UX68 686 aa8.41□□□□□ -1.06
RC3H1-205ENST00000484867 NCAPG2Q86XI2 1143 aa8.41□□□□□ -1.06
RC3H1-205ENST00000484867 RNF208Q9H0X6 261 aa8.41□□□□□ -1.06
RC3H1-205ENST00000484867 DZANK1Q9NVP4 752 aa8.41□□□□□ -1.06
RC3H1-205ENST00000484867 TMEM132AQ24JP5 1023 aa8.4□□□□□ -1.06
RC3H1-205ENST00000484867 LCE1DQ5T752 114 aa8.4□□□□□ -1.06
RC3H1-205ENST00000484867 HGSNATQ68CP4 663 aa8.4□□□□□ -1.06
RC3H1-205ENST00000484867 NFXL1Q6ZNB6 911 aa8.4□□□□□ -1.06
RC3H1-205ENST00000484867 CLP1Q92989 425 aaKnown RBP8.4□□□□□ -1.06
RC3H1-205ENST00000484867 KANSL3Q9P2N6 904 aa8.4□□□□□ -1.06
RC3H1-205ENST00000484867 SOX13Q9UN79 622 aa8.4□□□□□ -1.06
RC3H1-205ENST00000484867 ATG7O95352 703 aa8.39□□□□□ -1.07
RC3H1-205ENST00000484867 TMEM164Q5U3C3 297 aa8.39□□□□□ -1.07
RC3H1-205ENST00000484867 ABTB2Q8N961 1025 aa8.39□□□□□ -1.07
RC3H1-205ENST00000484867 NUDT16Q96DE0 195 aaKnown RBP8.39□□□□□ -1.07
RC3H1-205ENST00000484867 HHIPQ96QV1 700 aa8.39□□□□□ -1.07
RC3H1-205ENST00000484867 WDR64B1ANS9 1081 aa8.38□□□□□ -1.07
RC3H1-205ENST00000484867 MSMPQ1L6U9 139 aa8.38□□□□□ -1.07
RC3H1-205ENST00000484867 C1orf127Q8N9H9 656 aa8.38□□□□□ -1.07
RC3H1-205ENST00000484867 RUSC1Q9BVN2 902 aa8.38□□□□□ -1.07
RC3H1-205ENST00000484867 KRTAP4-7Q9BYR0 210 aa8.38□□□□□ -1.07
RC3H1-205ENST00000484867 KCNF1Q9H3M0 494 aa8.38□□□□□ -1.07
RC3H1-205ENST00000484867 SART1O43290 800 aaKnown RBP8.37□□□□□ -1.07
RC3H1-205ENST00000484867 NLRP12P59046 1061 aa8.37□□□□□ -1.07
RC3H1-205ENST00000484867 ATCAYQ86WG3 371 aa8.37□□□□□ -1.07
RC3H1-205ENST00000484867 ABI1Q8IZP0 508 aa8.37□□□□□ -1.07
RC3H1-205ENST00000484867 TMPRSS13Q9BYE2 586 aa8.37□□□□□ -1.07
RC3H1-205ENST00000484867 CHRDQ9H2X0 955 aa8.37□□□□□ -1.07
RC3H1-205ENST00000484867 PIM2Q9P1W9 311 aa8.37□□□□□ -1.07
RC3H1-205ENST00000484867 PDE2AO00408 941 aaPredicted RBP8.36□□□□□ -1.07
RC3H1-205ENST00000484867 TRPA1O75762 1119 aa8.36□□□□□ -1.07
RC3H1-205ENST00000484867 TIAF1O95411 115 aa8.36□□□□□ -1.07
RC3H1-205ENST00000484867 F13BP05160 661 aa8.36□□□□□ -1.07
RC3H1-205ENST00000484867 MAP4P27816 1152 aaKnown RBP8.36□□□□□ -1.07
RC3H1-205ENST00000484867 CABP4P57796 275 aa8.36□□□□□ -1.07
RC3H1-205ENST00000484867 MFSD14AQ96MC6 490 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms