RNA–Protein interactions for RNA: ENST00000484733.6

SCFD1-206, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-206ENST00000484733 COA1Q9GZY4 146 aa14.63□□□□□ -0.07
SCFD1-206ENST00000484733 GBA2Q9HCG7 927 aaPredicted RBP14.63□□□□□ -0.07
SCFD1-206ENST00000484733 PITPNM2Q9BZ72 1349 aa14.62□□□□□ -0.07
SCFD1-206ENST00000484733 ADM5C9JUS6 153 aa14.62□□□□□ -0.07
SCFD1-206ENST00000484733 USP17L8P0C7I0 530 aa14.62□□□□□ -0.07
SCFD1-206ENST00000484733 ITGA6P23229 1130 aa14.62□□□□□ -0.07
SCFD1-206ENST00000484733 HUNKP57058 714 aa14.62□□□□□ -0.07
SCFD1-206ENST00000484733 NOGQ13253 232 aa14.62□□□□□ -0.07
SCFD1-206ENST00000484733 SCARF1Q14162 830 aa14.61□□□□□ -0.07
SCFD1-206ENST00000484733 RGMBQ6NW40 437 aa14.61□□□□□ -0.07
SCFD1-206ENST00000484733 SULF1Q8IWU6 871 aa14.61□□□□□ -0.07
SCFD1-206ENST00000484733 GGA3Q9NZ52 723 aa14.61□□□□□ -0.07
SCFD1-206ENST00000484733 MYO3BQ8WXR4 1341 aa14.61□□□□□ -0.07
SCFD1-206ENST00000484733 DACT2Q5SW24 774 aa14.61□□□□□ -0.07
SCFD1-206ENST00000484733 DLK2Q6UY11 383 aa14.61□□□□□ -0.07
SCFD1-206ENST00000484733 MYOZ2Q9NPC6 264 aa14.61□□□□□ -0.07
SCFD1-206ENST00000484733 WTIPA6NIX2 430 aaPredicted RBP14.6□□□□□ -0.07
SCFD1-206ENST00000484733 STRIP1Q5VSL9 837 aa14.6□□□□□ -0.07
SCFD1-206ENST00000484733 CCDC102AQ96A19 550 aa14.6□□□□□ -0.07
SCFD1-206ENST00000484733 FAM155AB1AL88 458 aaPredicted RBP14.6□□□□□ -0.07
SCFD1-206ENST00000484733 BEND3Q5T5X7 828 aa14.6□□□□□ -0.07
SCFD1-206ENST00000484733 CDCA5Q96FF9 252 aa14.6□□□□□ -0.07
SCFD1-206ENST00000484733 SPINK5Q9NQ38 1064 aaPredicted RBP14.6□□□□□ -0.07
SCFD1-206ENST00000484733 ZNF804BA4D1E1 1349 aa14.6□□□□□ -0.07
SCFD1-206ENST00000484733 ASTN2O75129 1339 aaPredicted RBP14.6□□□□□ -0.07
SCFD1-206ENST00000484733 FOXO4P98177 505 aa14.59□□□□□ -0.07
SCFD1-206ENST00000484733 FAM161AQ3B820 660 aa14.59□□□□□ -0.07
SCFD1-206ENST00000484733 C15orf52Q6ZUT6 534 aaKnown RBP14.59□□□□□ -0.07
SCFD1-206ENST00000484733 MPHOSPH8Q99549 860 aa14.59□□□□□ -0.07
SCFD1-206ENST00000484733 SALL2Q9Y467 1007 aaPredicted RBP14.59□□□□□ -0.07
SCFD1-206ENST00000484733 ANKRD18BA2A2Z9 1011 aa14.59□□□□□ -0.07
SCFD1-206ENST00000484733 FKBP1BP68106 108 aa14.59□□□□□ -0.07
SCFD1-206ENST00000484733 ANGEL2Q5VTE6 544 aaKnown RBP14.59□□□□□ -0.07
SCFD1-206ENST00000484733 TXNRD3Q86VQ6 643 aa14.58□□□□□ -0.08
SCFD1-206ENST00000484733 PAPPA2Q9BXP8 1791 aa14.57□□□□□ -0.08
SCFD1-206ENST00000484733 CHRNDQ07001 517 aa14.57□□□□□ -0.08
SCFD1-206ENST00000484733 ABHD8Q96I13 439 aa14.57□□□□□ -0.08
SCFD1-206ENST00000484733 ZIC5Q96T25 663 aa14.57□□□□□ -0.08
SCFD1-206ENST00000484733 IRS2Q9Y4H2 1338 aa14.57□□□□□ -0.08
SCFD1-206ENST00000484733 ALDH1L1O75891 902 aa14.57□□□□□ -0.08
SCFD1-206ENST00000484733 SLC10A3P09131 477 aa14.57□□□□□ -0.08
SCFD1-206ENST00000484733 SAGE1Q9NXZ1 904 aa14.57□□□□□ -0.08
SCFD1-206ENST00000484733 A0A1B0GUL6 1792 aa14.56□□□□□ -0.08
SCFD1-206ENST00000484733 F6X3S4 739 aa14.56□□□□□ -0.08
SCFD1-206ENST00000484733 ZNF157P51786 506 aaPredicted RBP14.56□□□□□ -0.08
SCFD1-206ENST00000484733 IFIT5Q13325 482 aaKnown RBP14.56□□□□□ -0.08
SCFD1-206ENST00000484733 REM2Q8IYK8 340 aaPredicted RBP14.56□□□□□ -0.08
SCFD1-206ENST00000484733 OGFOD1Q8N543 542 aa14.56□□□□□ -0.08
SCFD1-206ENST00000484733 ZNF521Q96K83 1311 aa14.56□□□□□ -0.08
SCFD1-206ENST00000484733 TTLL5Q6EMB2 1281 aa14.55□□□□□ -0.08
SCFD1-206ENST00000484733 FAM9BQ8IZU0 186 aa14.55□□□□□ -0.08
SCFD1-206ENST00000484733 GRM8O00222 908 aa14.55□□□□□ -0.08
SCFD1-206ENST00000484733 KIF23Q02241 960 aaPredicted RBP14.55□□□□□ -0.08
SCFD1-206ENST00000484733 MXD3Q9BW11 206 aa14.55□□□□□ -0.08
SCFD1-206ENST00000484733 TSKSQ9UJT2 592 aa14.55□□□□□ -0.08
SCFD1-206ENST00000484733 KLRK1P26718 216 aa14.54□□□□□ -0.08
SCFD1-206ENST00000484733 KCNJ4P48050 445 aa14.54□□□□□ -0.08
SCFD1-206ENST00000484733 NBPF9Q3BBW0 867 aa14.54□□□□□ -0.08
SCFD1-206ENST00000484733 ZBED3Q96IU2 234 aaPredicted RBP14.54□□□□□ -0.08
SCFD1-206ENST00000484733 CD209Q9NNX6 404 aa14.54□□□□□ -0.08
SCFD1-206ENST00000484733 HDAC9Q9UKV0 1011 aa14.54□□□□□ -0.08
SCFD1-206ENST00000484733 WNT10BO00744 389 aa14.54□□□□□ -0.08
SCFD1-206ENST00000484733 FKBP1AP62942 108 aaKnown RBP14.53□□□□□ -0.08
SCFD1-206ENST00000484733 LMBR1LQ6UX01 489 aa14.53□□□□□ -0.08
SCFD1-206ENST00000484733 FBXW7Q969H0 707 aa14.53□□□□□ -0.08
SCFD1-206ENST00000484733 IL1R1P14778 569 aa14.53□□□□□ -0.08
SCFD1-206ENST00000484733 GTF2IP78347 998 aa14.53□□□□□ -0.08
SCFD1-206ENST00000484733 EPHA10Q5JZY3 1008 aa14.53□□□□□ -0.08
SCFD1-206ENST00000484733 RASAL3Q86YV0 1011 aa14.53□□□□□ -0.08
SCFD1-206ENST00000484733 SRCIN1Q9C0H9 1055 aa14.53□□□□□ -0.08
SCFD1-206ENST00000484733 CCDC57Q2TAC2 916 aa14.52□□□□□ -0.08
SCFD1-206ENST00000484733 MTMR14Q8NCE2 650 aa14.52□□□□□ -0.08
SCFD1-206ENST00000484733 CSRNP1Q96S65 589 aa14.52□□□□□ -0.08
SCFD1-206ENST00000484733 UTYO14607 1347 aa14.52□□□□□ -0.09
SCFD1-206ENST00000484733 APOBEC3FQ8IUX4 373 aaKnown RBP14.52□□□□□ -0.09
SCFD1-206ENST00000484733 C9orf78Q9NZ63 289 aaPredicted RBP14.52□□□□□ -0.09
SCFD1-206ENST00000484733 AKAP11Q9UKA4 1901 aa14.51□□□□□ -0.09
SCFD1-206ENST00000484733 TAF5LO75529 589 aa14.51□□□□□ -0.09
SCFD1-206ENST00000484733 ZNF804AQ7Z570 1209 aa14.51□□□□□ -0.09
SCFD1-206ENST00000484733 RNF186Q9NXI6 227 aa14.51□□□□□ -0.09
SCFD1-206ENST00000484733 CHMP3Q9Y3E7 222 aa14.51□□□□□ -0.09
SCFD1-206ENST00000484733 COL1A1P02452 1464 aaPredicted RBP14.51□□□□□ -0.09
SCFD1-206ENST00000484733 HELBQ8NG08 1087 aaPredicted RBP14.5□□□□□ -0.09
SCFD1-206ENST00000484733 CASP8AP2Q9UKL3 1982 aa14.5□□□□□ -0.09
SCFD1-206ENST00000484733 NF2P35240 595 aa14.5□□□□□ -0.09
SCFD1-206ENST00000484733 LDHAL6AQ6ZMR3 332 aa14.5□□□□□ -0.09
SCFD1-206ENST00000484733 KIAA0825Q8IV33 1275 aa14.5□□□□□ -0.09
SCFD1-206ENST00000484733 MRPL50Q8N5N7 158 aaKnown RBP14.5□□□□□ -0.09
SCFD1-206ENST00000484733 MCOLN1Q9GZU1 580 aa14.5□□□□□ -0.09
SCFD1-206ENST00000484733 SNAP23O00161 211 aa14.49□□□□□ -0.09
SCFD1-206ENST00000484733 SASH1O94885 1247 aa14.49□□□□□ -0.09
SCFD1-206ENST00000484733 TAF7LQ5H9L4 462 aa14.49□□□□□ -0.09
SCFD1-206ENST00000484733 CERS5Q8N5B7 392 aa14.49□□□□□ -0.09
SCFD1-206ENST00000484733 ECM29Q5VYK3 1845 aa14.49□□□□□ -0.09
SCFD1-206ENST00000484733 UBE4AQ14139 1066 aa14.49□□□□□ -0.09
SCFD1-206ENST00000484733 SLC4A10Q6U841 1118 aa14.49□□□□□ -0.09
SCFD1-206ENST00000484733 KAZALD1Q96I82 304 aa14.49□□□□□ -0.09
SCFD1-206ENST00000484733 SUCLG2Q96I99 432 aa14.49□□□□□ -0.09
SCFD1-206ENST00000484733 ZNF594Q96JF6 807 aaPredicted RBP14.49□□□□□ -0.09
SCFD1-206ENST00000484733 CNNM1Q9NRU3 951 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 143.5 ms