RNA–Protein interactions for RNA: ENST00000484298.5

ALMS1-204, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ALMS1, Length 12,595 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-204ENST00000484298 ZNF354CQ86Y25 554 aa10.75□□□□□ -0.69
ALMS1-204ENST00000484298 RBM42Q9BTD8 480 aaKnown RBP10.75□□□□□ -0.69
ALMS1-204ENST00000484298 DUX4Q9UBX2 424 aa10.75□□□□□ -0.69
ALMS1-204ENST00000484298 SLC12A7Q9Y666 1083 aa10.75□□□□□ -0.69
ALMS1-204ENST00000484298 RNF41Q9H4P4 317 aaPredicted RBP10.75□□□□□ -0.69
ALMS1-204ENST00000484298 GTF3C6Q969F1 213 aa10.75□□□□□ -0.69
ALMS1-204ENST00000484298 MAK16Q9BXY0 300 aaKnown RBP10.75□□□□□ -0.69
ALMS1-204ENST00000484298 MRPL46Q9H2W6 279 aaKnown RBP10.75□□□□□ -0.69
ALMS1-204ENST00000484298 APOEP02649 317 aa10.75□□□□□ -0.69
ALMS1-204ENST00000484298 ITIH3Q06033 890 aa10.75□□□□□ -0.69
ALMS1-204ENST00000484298 CCDC25Q86WR0 208 aa10.75□□□□□ -0.69
ALMS1-204ENST00000484298 IFT20Q8IY31 132 aa10.75□□□□□ -0.69
ALMS1-204ENST00000484298 NEK1Q96PY6 1258 aa10.75□□□□□ -0.69
ALMS1-204ENST00000484298 SCHIP1Q9P0W5 487 aaPredicted RBP10.75□□□□□ -0.69
ALMS1-204ENST00000484298 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.74□□□□□ -0.69
ALMS1-204ENST00000484298 FKBP4Q02790 459 aaKnown RBP eCLIP10.74□□□□□ -0.69
ALMS1-204ENST00000484298 MPHOSPH6Q99547 160 aaKnown RBP10.74□□□□□ -0.69
ALMS1-204ENST00000484298 ZBTB12Q9Y330 459 aaPredicted RBP10.74□□□□□ -0.69
ALMS1-204ENST00000484298 TTLL12Q14166 644 aaPredicted RBP10.74□□□□□ -0.69
ALMS1-204ENST00000484298 PPFIA4O75335 1185 aa10.74□□□□□ -0.69
ALMS1-204ENST00000484298 ANKRD20A3Q5VUR7 823 aa10.74□□□□□ -0.69
ALMS1-204ENST00000484298 MKL2Q9ULH7 1088 aa10.74□□□□□ -0.69
ALMS1-204ENST00000484298 NUTM2BA6NNL0 878 aaPredicted RBP10.74□□□□□ -0.69
ALMS1-204ENST00000484298 NUTM2EB1AL46 878 aaPredicted RBP10.74□□□□□ -0.69
ALMS1-204ENST00000484298 CNGA4Q8IV77 575 aa10.74□□□□□ -0.69
ALMS1-204ENST00000484298 NUTM2AQ8IVF1 878 aaPredicted RBP10.74□□□□□ -0.69
ALMS1-204ENST00000484298 SMIM23A6NLE4 172 aa10.74□□□□□ -0.69
ALMS1-204ENST00000484298 HMGB2P26583 209 aaKnown RBP10.74□□□□□ -0.69
ALMS1-204ENST00000484298 TTF1Q15361 905 aaPredicted RBP10.74□□□□□ -0.69
ALMS1-204ENST00000484298 IQCA1Q86XH1 822 aa10.74□□□□□ -0.69
ALMS1-204ENST00000484298 AMOTQ4VCS5 1084 aa10.74□□□□□ -0.69
ALMS1-204ENST00000484298 MRFAP1L1Q96HT8 127 aa10.74□□□□□ -0.69
ALMS1-204ENST00000484298 GOLGA6BA6NDN3 693 aa10.74□□□□□ -0.69
ALMS1-204ENST00000484298 LGSNQ5TDP6 509 aa10.74□□□□□ -0.69
ALMS1-204ENST00000484298 HEATR3Q7Z4Q2 680 aa10.73□□□□□ -0.69
ALMS1-204ENST00000484298 GOLGA8QA0A0J9YX86 632 aa10.73□□□□□ -0.69
ALMS1-204ENST00000484298 GOLGA8OA6NCC3 632 aa10.73□□□□□ -0.69
ALMS1-204ENST00000484298 GOLGA8NF8WBI6 632 aa10.73□□□□□ -0.69
ALMS1-204ENST00000484298 STK10O94804 968 aaKnown RBP10.73□□□□□ -0.69
ALMS1-204ENST00000484298 EEF2P13639 858 aaKnown RBP10.73□□□□□ -0.69
ALMS1-204ENST00000484298 UBA7P41226 1012 aa10.73□□□□□ -0.69
ALMS1-204ENST00000484298 PPP2R3AQ06190 1150 aa10.73□□□□□ -0.69
ALMS1-204ENST00000484298 TTC19Q6DKK2 380 aaPredicted RBP10.73□□□□□ -0.69
ALMS1-204ENST00000484298 CCDC42Q96M95 316 aa10.73□□□□□ -0.69
ALMS1-204ENST00000484298 HAUS7Q99871 368 aa10.73□□□□□ -0.69
ALMS1-204ENST00000484298 EPS15L1Q9UBC2 864 aa10.73□□□□□ -0.69
ALMS1-204ENST00000484298 SSRP1Q08945 709 aaKnown RBP10.73□□□□□ -0.69
ALMS1-204ENST00000484298 VEZTQ9HBM0 779 aa10.73□□□□□ -0.69
ALMS1-204ENST00000484298 DEUP1Q05D60 604 aa10.73□□□□□ -0.69
ALMS1-204ENST00000484298 BAG1Q99933 345 aaPredicted RBP10.73□□□□□ -0.69
ALMS1-204ENST00000484298 CENPKQ9BS16 269 aa10.73□□□□□ -0.69
ALMS1-204ENST00000484298 VGLL3A8MV65 326 aa10.73□□□□□ -0.69
ALMS1-204ENST00000484298 PDZD8Q8NEN9 1154 aa10.73□□□□□ -0.69
ALMS1-204ENST00000484298 IWS1Q96ST2 819 aa10.73□□□□□ -0.69
ALMS1-204ENST00000484298 ZSCAN23Q3MJ62 389 aa10.73□□□□□ -0.69
ALMS1-204ENST00000484298 TNPO1Q92973 898 aaKnown RBP10.73□□□□□ -0.69
ALMS1-204ENST00000484298 BAG5Q9UL15 447 aa10.73□□□□□ -0.69
ALMS1-204ENST00000484298 FERMT3Q86UX7 667 aa10.73□□□□□ -0.69
ALMS1-204ENST00000484298 TMEM57Q8N5G2 664 aa10.73□□□□□ -0.69
ALMS1-204ENST00000484298 HMOX1P09601 288 aa10.73□□□□□ -0.69
ALMS1-204ENST00000484298 PSMA7O14818 248 aa10.72□□□□□ -0.69
ALMS1-204ENST00000484298 TMED1Q13445 227 aa10.72□□□□□ -0.69
ALMS1-204ENST00000484298 TMOD2Q9NZR1 351 aa10.72□□□□□ -0.69
ALMS1-204ENST00000484298 KCNG4Q8TDN1 519 aa10.72□□□□□ -0.69
ALMS1-204ENST00000484298 PPP4R1Q8TF05 950 aa10.72□□□□□ -0.69
ALMS1-204ENST00000484298 NUCKS1Q9H1E3 243 aaKnown RBP10.72□□□□□ -0.69
ALMS1-204ENST00000484298 ERO1AQ96HE7 468 aa10.72□□□□□ -0.69
ALMS1-204ENST00000484298 SNCBQ16143 134 aa10.72□□□□□ -0.69
ALMS1-204ENST00000484298 UBL4BQ8N7F7 174 aa10.72□□□□□ -0.69
ALMS1-204ENST00000484298 ARHGAP42A6NI28 874 aa10.72□□□□□ -0.69
ALMS1-204ENST00000484298 CATIPQ7Z7H3 387 aa10.72□□□□□ -0.69
ALMS1-204ENST00000484298 SKOR1P84550 965 aa10.72□□□□□ -0.69
ALMS1-204ENST00000484298 ZKSCAN8Q15776 578 aaPredicted RBP10.72□□□□□ -0.69
ALMS1-204ENST00000484298 ARHGAP4P98171 946 aa10.72□□□□□ -0.69
ALMS1-204ENST00000484298 LRP2BPQ9P2M1 347 aa10.72□□□□□ -0.69
ALMS1-204ENST00000484298 ATF3P18847 181 aa10.72□□□□□ -0.69
ALMS1-204ENST00000484298 DIABLOQ9NR28 239 aa10.72□□□□□ -0.69
ALMS1-204ENST00000484298 CCDC93Q567U6 631 aa10.71□□□□□ -0.69
ALMS1-204ENST00000484298 ZRANB2O95218 330 aaKnown RBP eCLIP10.71□□□□□ -0.69
ALMS1-204ENST00000484298 KCNA4P22459 653 aa10.71□□□□□ -0.69
ALMS1-204ENST00000484298 SIL1Q9H173 461 aa10.71□□□□□ -0.69
ALMS1-204ENST00000484298 C8orf74Q6P047 294 aa10.71□□□□□ -0.69
ALMS1-204ENST00000484298 UIMC1Q96RL1 719 aa10.71□□□□□ -0.69
ALMS1-204ENST00000484298 BAIAP2L1Q9UHR4 511 aa10.71□□□□□ -0.69
ALMS1-204ENST00000484298 TLDC2A0PJX2 215 aa10.71□□□□□ -0.69
ALMS1-204ENST00000484298 SPDL1Q96EA4 605 aa10.71□□□□□ -0.69
ALMS1-204ENST00000484298 YY1AP1Q9H869 796 aa10.71□□□□□ -0.69
ALMS1-204ENST00000484298 E7EVH7 732 aa10.71□□□□□ -0.69
ALMS1-204ENST00000484298 RHOXF2BP0C7M4 288 aa10.71□□□□□ -0.69
ALMS1-204ENST00000484298 NOP14P78316 857 aaKnown RBP10.71□□□□□ -0.69
ALMS1-204ENST00000484298 RHOXF2Q9BQY4 288 aa10.71□□□□□ -0.69
ALMS1-204ENST00000484298 KLHL14Q9P2G3 628 aa10.71□□□□□ -0.7
ALMS1-204ENST00000484298 RIPOR2Q9Y4F9 1068 aa10.71□□□□□ -0.7
ALMS1-204ENST00000484298 LONP1P36776 959 aaKnown RBP10.71□□□□□ -0.7
ALMS1-204ENST00000484298 RNF40O75150 1001 aa10.71□□□□□ -0.7
ALMS1-204ENST00000484298 DUSP27Q5VZP5 1158 aa10.71□□□□□ -0.7
ALMS1-204ENST00000484298 EFCAB2Q5VUJ9 269 aa10.71□□□□□ -0.7
ALMS1-204ENST00000484298 CDR2Q01850 454 aa10.7□□□□□ -0.7
ALMS1-204ENST00000484298 SYKP43405 635 aa10.7□□□□□ -0.7
ALMS1-204ENST00000484298 GLRX3O76003 335 aaKnown RBP10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms