RNA–Protein interactions for RNA: ENST00000484252.5

LIMS2-215, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,099 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-215ENST00000484252 NKX1-1Q15270 411 aaPredicted RBP23.15■■□□□ 1.3
LIMS2-215ENST00000484252 RCOR1Q9UKL0 485 aa23.15■■□□□ 1.3
LIMS2-215ENST00000484252 MAST3O60307 1309 aa23.14■■□□□ 1.3
LIMS2-215ENST00000484252 PTPDC1A2A3K4 754 aa23.14■■□□□ 1.29
LIMS2-215ENST00000484252 GTF2F1P35269 517 aaKnown RBP eCLIP23.14■■□□□ 1.29
LIMS2-215ENST00000484252 FBXL16Q8N461 479 aa23.14■■□□□ 1.29
LIMS2-215ENST00000484252 CCDC9Q9Y3X0 531 aaKnown RBP23.14■■□□□ 1.29
LIMS2-215ENST00000484252 A0A1B0GUL7 405 aa23.13■■□□□ 1.29
LIMS2-215ENST00000484252 ADD1P35611 737 aaKnown RBP23.13■■□□□ 1.29
LIMS2-215ENST00000484252 APOBRQ0VD83 1088 aa23.13■■□□□ 1.29
LIMS2-215ENST00000484252 SPC24Q8NBT2 197 aa23.13■■□□□ 1.29
LIMS2-215ENST00000484252 ZNF396Q96N95 335 aaPredicted RBP23.13■■□□□ 1.29
LIMS2-215ENST00000484252 CTDNEP1O95476 244 aa23.13■■□□□ 1.29
LIMS2-215ENST00000484252 LRRC24Q50LG9 513 aa23.13■■□□□ 1.29
LIMS2-215ENST00000484252 PRDM4Q9UKN5 801 aa23.13■■□□□ 1.29
LIMS2-215ENST00000484252 SALL1Q9NSC2 1324 aa23.12■■□□□ 1.29
LIMS2-215ENST00000484252 A1BGP04217 495 aa23.12■■□□□ 1.29
LIMS2-215ENST00000484252 CEP126Q9P2H0 1117 aa23.12■■□□□ 1.29
LIMS2-215ENST00000484252 CTNNA3Q9UI47 895 aa23.12■■□□□ 1.29
LIMS2-215ENST00000484252 MYH15Q9Y2K3 1946 aa23.12■■□□□ 1.29
LIMS2-215ENST00000484252 ZNF165P49910 485 aa23.12■■□□□ 1.29
LIMS2-215ENST00000484252 PLA2G4DQ86XP0 818 aa23.12■■□□□ 1.29
LIMS2-215ENST00000484252 TNS2Q63HR2 1409 aa23.11■■□□□ 1.29
LIMS2-215ENST00000484252 ZFYP08048 801 aaPredicted RBP23.11■■□□□ 1.29
LIMS2-215ENST00000484252 C17orf53Q8N3J3 647 aaPredicted RBP23.11■■□□□ 1.29
LIMS2-215ENST00000484252 ZBTB3Q9H5J0 574 aa23.11■■□□□ 1.29
LIMS2-215ENST00000484252 PYCARDQ9ULZ3 195 aa23.11■■□□□ 1.29
LIMS2-215ENST00000484252 AKAP2Q9Y2D5 859 aa23.11■■□□□ 1.29
LIMS2-215ENST00000484252 ZNF75DP51815 510 aa23.1■■□□□ 1.29
LIMS2-215ENST00000484252 SMAP1Q8IYB5 467 aaPredicted RBP23.1■■□□□ 1.29
LIMS2-215ENST00000484252 PDIA3P30101 505 aaKnown RBP23.1■■□□□ 1.29
LIMS2-215ENST00000484252 EVCP57679 992 aa23.1■■□□□ 1.29
LIMS2-215ENST00000484252 CCDC158Q5M9N0 1113 aa23.1■■□□□ 1.29
LIMS2-215ENST00000484252 TOM1L2Q6ZVM7 507 aa23.1■■□□□ 1.29
LIMS2-215ENST00000484252 ZNF594Q96JF6 807 aaPredicted RBP23.1■■□□□ 1.29
LIMS2-215ENST00000484252 ISCA1Q9BUE6 129 aa23.1■■□□□ 1.29
LIMS2-215ENST00000484252 ABCC12Q96J65 1359 aa23.09■■□□□ 1.29
LIMS2-215ENST00000484252 CCDC57Q2TAC2 916 aa23.09■■□□□ 1.29
LIMS2-215ENST00000484252 SLFNL1Q499Z3 407 aa23.09■■□□□ 1.29
LIMS2-215ENST00000484252 CCAR1Q8IX12 1150 aaKnown RBP23.09■■□□□ 1.29
LIMS2-215ENST00000484252 TRIM5Q9C035 493 aa23.09■■□□□ 1.29
LIMS2-215ENST00000484252 M0R2C6 588 aa23.08■■□□□ 1.29
LIMS2-215ENST00000484252 CDC25BP30305 580 aa23.08■■□□□ 1.29
LIMS2-215ENST00000484252 CCT2P78371 535 aaKnown RBP23.08■■□□□ 1.29
LIMS2-215ENST00000484252 CHAF1AQ13111 956 aaPredicted RBP23.08■■□□□ 1.29
LIMS2-215ENST00000484252 CCDC73Q6ZRK6 1079 aa23.08■■□□□ 1.29
LIMS2-215ENST00000484252 DNAJC25Q9H1X3 360 aa23.08■■□□□ 1.29
LIMS2-215ENST00000484252 PTGS1P23219 599 aa23.07■■□□□ 1.28
LIMS2-215ENST00000484252 TRIM28Q13263 835 aaKnown RBP23.07■■□□□ 1.28
LIMS2-215ENST00000484252 PRDM11Q9NQV5 511 aa23.07■■□□□ 1.28
LIMS2-215ENST00000484252 TCIRG1Q13488 830 aa23.07■■□□□ 1.28
LIMS2-215ENST00000484252 STX1AQ16623 288 aa23.07■■□□□ 1.28
LIMS2-215ENST00000484252 TTC39AQ5SRH9 613 aa23.07■■□□□ 1.28
LIMS2-215ENST00000484252 DRC7Q8IY82 874 aa23.07■■□□□ 1.28
LIMS2-215ENST00000484252 IL2RBP14784 551 aa23.06■■□□□ 1.28
LIMS2-215ENST00000484252 GORABQ5T7V8 394 aa23.06■■□□□ 1.28
LIMS2-215ENST00000484252 OSBP2Q969R2 916 aa23.06■■□□□ 1.28
LIMS2-215ENST00000484252 PUS3Q9BZE2 481 aaKnown RBP23.06■■□□□ 1.28
LIMS2-215ENST00000484252 COL5A2P05997 1499 aaPredicted RBP23.06■■□□□ 1.28
LIMS2-215ENST00000484252 XIRP1Q702N8 1843 aaKnown RBP23.06■■□□□ 1.28
LIMS2-215ENST00000484252 IMMTQ16891 758 aaKnown RBP23.05■■□□□ 1.28
LIMS2-215ENST00000484252 SARM1Q6SZW1 724 aa23.05■■□□□ 1.28
LIMS2-215ENST00000484252 USP28Q96RU2 1077 aa23.05■■□□□ 1.28
LIMS2-215ENST00000484252 PLA2G12BQ9BX93 195 aa23.05■■□□□ 1.28
LIMS2-215ENST00000484252 CARMIL3Q8ND23 1372 aa23.05■■□□□ 1.28
LIMS2-215ENST00000484252 GOLGA6L19H0YKK7 550 aa23.05■■□□□ 1.28
LIMS2-215ENST00000484252 FKBP4Q02790 459 aaKnown RBP eCLIP23.05■■□□□ 1.28
LIMS2-215ENST00000484252 CEBPZQ03701 1054 aaKnown RBP23.05■■□□□ 1.28
LIMS2-215ENST00000484252 FAM160A1Q05DH4 1040 aa23.05■■□□□ 1.28
LIMS2-215ENST00000484252 CCDC186Q7Z3E2 898 aa23.05■■□□□ 1.28
LIMS2-215ENST00000484252 CARD10Q9BWT7 1032 aa23.05■■□□□ 1.28
LIMS2-215ENST00000484252 NCOA5Q9HCD5 579 aaKnown RBP23.05■■□□□ 1.28
LIMS2-215ENST00000484252 NAP1L2Q9ULW6 460 aaPredicted RBP23.05■■□□□ 1.28
LIMS2-215ENST00000484252 KINO60870 393 aaKnown RBP23.04■■□□□ 1.28
LIMS2-215ENST00000484252 XAGE2Q96GT9 111 aa23.04■■□□□ 1.28
LIMS2-215ENST00000484252 A0A0G2JLW4 131 aa23.04■■□□□ 1.28
LIMS2-215ENST00000484252 DHX16O60231 1041 aaKnown RBP23.04■■□□□ 1.28
LIMS2-215ENST00000484252 PCCAP05165 728 aaPredicted RBP23.04■■□□□ 1.28
LIMS2-215ENST00000484252 IQCB1Q15051 598 aa23.04■■□□□ 1.28
LIMS2-215ENST00000484252 SNW1Q13573 536 aaKnown RBP23.03■■□□□ 1.28
LIMS2-215ENST00000484252 ENGASEQ8NFI3 743 aa23.03■■□□□ 1.28
LIMS2-215ENST00000484252 WDR19Q8NEZ3 1342 aa23.02■■□□□ 1.28
LIMS2-215ENST00000484252 FOSBP53539 338 aa23.02■■□□□ 1.28
LIMS2-215ENST00000484252 TTLL5Q6EMB2 1281 aa23.02■■□□□ 1.28
LIMS2-215ENST00000484252 APPBP2Q92624 585 aa23.02■■□□□ 1.28
LIMS2-215ENST00000484252 TEX13AQ9BXU3 409 aaPredicted RBP23.02■■□□□ 1.28
LIMS2-215ENST00000484252 GOLPH3LQ9H4A5 285 aa23.02■■□□□ 1.28
LIMS2-215ENST00000484252 RTEL1Q9NZ71 1219 aa23.02■■□□□ 1.28
LIMS2-215ENST00000484252 WASHC4Q2M389 1173 aa23.02■■□□□ 1.28
LIMS2-215ENST00000484252 RGS22Q8NE09 1264 aa23.02■■□□□ 1.28
LIMS2-215ENST00000484252 ANO10Q9NW15 660 aa23.02■■□□□ 1.28
LIMS2-215ENST00000484252 CLIP2Q9UDT6 1046 aa23.02■■□□□ 1.28
LIMS2-215ENST00000484252 CSF1RP07333 972 aa23.01■■□□□ 1.27
LIMS2-215ENST00000484252 ZSCAN25Q6NSZ9 544 aa23.01■■□□□ 1.27
LIMS2-215ENST00000484252 A0A1W2PQ27 194 aa23.01■■□□□ 1.27
LIMS2-215ENST00000484252 A0A1W2PQ64 194 aa23.01■■□□□ 1.27
LIMS2-215ENST00000484252 A0A1W2PQD8 194 aa23.01■■□□□ 1.27
LIMS2-215ENST00000484252 FDPSP14324 419 aaKnown RBP23.01■■□□□ 1.27
LIMS2-215ENST00000484252 ME1P48163 572 aa23.01■■□□□ 1.27
LIMS2-215ENST00000484252 TAF7LQ5H9L4 462 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms