RNA–Protein interactions for RNA: ENST00000483763.5

CDC42SE1-204, Transcript of CDC42 small effector 1, humanhuman

TSL 1 (best)

Gene CDC42SE1, Length 2,379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-204ENST00000483763 JAKMIP1Q96N16 626 aaKnown RBP10.62□□□□□ -0.71
CDC42SE1-204ENST00000483763 NARFQ9UHQ1 456 aa10.62□□□□□ -0.71
CDC42SE1-204ENST00000483763 ATF5Q9Y2D1 282 aaPredicted RBP10.62□□□□□ -0.71
CDC42SE1-204ENST00000483763 DTNBO60941 627 aa10.62□□□□□ -0.71
CDC42SE1-204ENST00000483763 FGFR2P21802 821 aa10.62□□□□□ -0.71
CDC42SE1-204ENST00000483763 PHKA1P46020 1223 aa10.62□□□□□ -0.71
CDC42SE1-204ENST00000483763 KCNJ4P48050 445 aa10.62□□□□□ -0.71
CDC42SE1-204ENST00000483763 AK2P54819 239 aa10.62□□□□□ -0.71
CDC42SE1-204ENST00000483763 ZNF827Q17R98 1081 aa10.62□□□□□ -0.71
CDC42SE1-204ENST00000483763 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.62□□□□□ -0.71
CDC42SE1-204ENST00000483763 DDX60Q8IY21 1712 aaKnown RBP10.62□□□□□ -0.71
CDC42SE1-204ENST00000483763 LY75O60449 1722 aa10.61□□□□□ -0.71
CDC42SE1-204ENST00000483763 A0A0G2JLW4 131 aa10.61□□□□□ -0.71
CDC42SE1-204ENST00000483763 PHF14O94880 888 aa10.61□□□□□ -0.71
CDC42SE1-204ENST00000483763 CUL4AQ13619 759 aa10.61□□□□□ -0.71
CDC42SE1-204ENST00000483763 CCDC152Q4G0S7 254 aa10.61□□□□□ -0.71
CDC42SE1-204ENST00000483763 OSBP2Q969R2 916 aa10.61□□□□□ -0.71
CDC42SE1-204ENST00000483763 TCEANC2Q96MN5 208 aa10.61□□□□□ -0.71
CDC42SE1-204ENST00000483763 MPHOSPH8Q99549 860 aa10.61□□□□□ -0.71
CDC42SE1-204ENST00000483763 ZSWIM6Q9HCJ5 1215 aa10.61□□□□□ -0.71
CDC42SE1-204ENST00000483763 RTCBQ9Y3I0 505 aaKnown RBP10.61□□□□□ -0.71
CDC42SE1-204ENST00000483763 BCORQ6W2J9 1755 aa10.61□□□□□ -0.71
CDC42SE1-204ENST00000483763 RFX7Q2KHR2 1363 aa10.61□□□□□ -0.71
CDC42SE1-204ENST00000483763 ABCC12Q96J65 1359 aa10.61□□□□□ -0.71
CDC42SE1-204ENST00000483763 MCM2P49736 904 aa10.61□□□□□ -0.71
CDC42SE1-204ENST00000483763 PDE4CQ08493 712 aa10.61□□□□□ -0.71
CDC42SE1-204ENST00000483763 ZMYM1Q5SVZ6 1142 aa10.61□□□□□ -0.71
CDC42SE1-204ENST00000483763 CCDC102BQ68D86 513 aa10.61□□□□□ -0.71
CDC42SE1-204ENST00000483763 ZDHHC9Q9Y397 364 aa10.61□□□□□ -0.71
CDC42SE1-204ENST00000483763 LRP5O75197 1615 aa10.61□□□□□ -0.71
CDC42SE1-204ENST00000483763 M0R2C6 588 aa10.6□□□□□ -0.71
CDC42SE1-204ENST00000483763 RNF113AO15541 343 aaKnown RBP10.6□□□□□ -0.71
CDC42SE1-204ENST00000483763 LARGE1O95461 756 aa10.6□□□□□ -0.71
CDC42SE1-204ENST00000483763 CYP2E1P05181 493 aaPredicted RBP10.6□□□□□ -0.71
CDC42SE1-204ENST00000483763 PUM3Q15397 648 aaKnown RBP10.6□□□□□ -0.71
CDC42SE1-204ENST00000483763 MAST3O60307 1309 aa10.6□□□□□ -0.71
CDC42SE1-204ENST00000483763 MROH5Q6ZUA9 1318 aa10.6□□□□□ -0.71
CDC42SE1-204ENST00000483763 RPAP1Q9BWH6 1393 aaPredicted RBP10.6□□□□□ -0.71
CDC42SE1-204ENST00000483763 FOXP2O15409 715 aa10.6□□□□□ -0.71
CDC42SE1-204ENST00000483763 ZPR1O75312 459 aa10.6□□□□□ -0.71
CDC42SE1-204ENST00000483763 CYP21A2P08686 494 aa10.6□□□□□ -0.71
CDC42SE1-204ENST00000483763 ZKSCAN1P17029 563 aaPredicted RBP10.6□□□□□ -0.71
CDC42SE1-204ENST00000483763 LPIN2Q92539 896 aa10.6□□□□□ -0.71
CDC42SE1-204ENST00000483763 CHAMP1Q96JM3 812 aa10.6□□□□□ -0.71
CDC42SE1-204ENST00000483763 RTL9Q8NET4 1388 aa10.59□□□□□ -0.71
CDC42SE1-204ENST00000483763 SF3B3Q15393 1217 aaKnown RBP10.59□□□□□ -0.71
CDC42SE1-204ENST00000483763 SETDB2Q96T68 719 aa10.59□□□□□ -0.71
CDC42SE1-204ENST00000483763 TM6SF1Q9BZW5 370 aa10.59□□□□□ -0.71
CDC42SE1-204ENST00000483763 PUS7LQ9H0K6 701 aaKnown RBP10.59□□□□□ -0.71
CDC42SE1-204ENST00000483763 HELLSQ9NRZ9 838 aa10.59□□□□□ -0.71
CDC42SE1-204ENST00000483763 TAF1LQ8IZX4 1826 aa10.59□□□□□ -0.71
CDC42SE1-204ENST00000483763 TAF1P21675 1872 aa10.59□□□□□ -0.71
CDC42SE1-204ENST00000483763 HSPD1P10809 573 aaKnown RBP10.59□□□□□ -0.71
CDC42SE1-204ENST00000483763 CHRNDQ07001 517 aa10.59□□□□□ -0.71
CDC42SE1-204ENST00000483763 TSGA10IPQ3SY00 556 aa10.59□□□□□ -0.71
CDC42SE1-204ENST00000483763 CELF1Q92879 486 aaKnown RBP10.59□□□□□ -0.71
CDC42SE1-204ENST00000483763 CWC22Q9HCG8 908 aaKnown RBP10.59□□□□□ -0.71
CDC42SE1-204ENST00000483763 PIH1D3Q9NQM4 214 aaKnown RBP10.59□□□□□ -0.71
CDC42SE1-204ENST00000483763 PDRG1Q9NUG6 133 aa10.59□□□□□ -0.71
CDC42SE1-204ENST00000483763 AKAP11Q9UKA4 1901 aa10.58□□□□□ -0.72
CDC42SE1-204ENST00000483763 GTF2E1P29083 439 aaPredicted RBP10.58□□□□□ -0.72
CDC42SE1-204ENST00000483763 IGHMBP2P38935 993 aaKnown RBP10.58□□□□□ -0.72
CDC42SE1-204ENST00000483763 BCAMP50895 628 aa10.58□□□□□ -0.72
CDC42SE1-204ENST00000483763 ST3GAL1Q11201 340 aa10.58□□□□□ -0.72
CDC42SE1-204ENST00000483763 SLC10A5Q5PT55 438 aa10.58□□□□□ -0.72
CDC42SE1-204ENST00000483763 SLC51AQ86UW1 340 aa10.58□□□□□ -0.72
CDC42SE1-204ENST00000483763 ZNF512BQ96KM6 892 aaPredicted RBP10.58□□□□□ -0.72
CDC42SE1-204ENST00000483763 LIMCH1Q9UPQ0 1083 aa10.58□□□□□ -0.72
CDC42SE1-204ENST00000483763 CYP46A1Q9Y6A2 500 aa10.58□□□□□ -0.72
CDC42SE1-204ENST00000483763 C4BP0C0L5 1744 aa10.58□□□□□ -0.72
CDC42SE1-204ENST00000483763 ARID4AP29374 1257 aaPredicted RBP10.58□□□□□ -0.72
CDC42SE1-204ENST00000483763 RASGRF1Q13972 1273 aa10.58□□□□□ -0.72
CDC42SE1-204ENST00000483763 SLC15A2Q16348 729 aa10.58□□□□□ -0.72
CDC42SE1-204ENST00000483763 TRAPPC3LQ5T215 181 aa10.58□□□□□ -0.72
CDC42SE1-204ENST00000483763 TTLL5Q6EMB2 1281 aa10.58□□□□□ -0.72
CDC42SE1-204ENST00000483763 STOX1Q6ZVD7 989 aa10.58□□□□□ -0.72
CDC42SE1-204ENST00000483763 NBPF5PQ86XG9 351 aaPredicted RBP10.58□□□□□ -0.72
CDC42SE1-204ENST00000483763 INTS4Q96HW7 963 aaKnown RBP10.58□□□□□ -0.72
CDC42SE1-204ENST00000483763 HMG20BQ9P0W2 317 aa10.58□□□□□ -0.72
CDC42SE1-204ENST00000483763 SCN7AQ01118 1682 aa10.57□□□□□ -0.72
CDC42SE1-204ENST00000483763 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.57□□□□□ -0.72
CDC42SE1-204ENST00000483763 RGL2O15211 777 aa10.57□□□□□ -0.72
CDC42SE1-204ENST00000483763 RFC4P35249 363 aa10.57□□□□□ -0.72
CDC42SE1-204ENST00000483763 ME3Q16798 604 aa10.57□□□□□ -0.72
CDC42SE1-204ENST00000483763 SLC27A3Q5K4L6 730 aa10.57□□□□□ -0.72
CDC42SE1-204ENST00000483763 RNF20Q5VTR2 975 aa10.57□□□□□ -0.72
CDC42SE1-204ENST00000483763 FOXD4L5Q5VV16 416 aaPredicted RBP10.57□□□□□ -0.72
CDC42SE1-204ENST00000483763 MSL1Q68DK7 614 aa10.57□□□□□ -0.72
CDC42SE1-204ENST00000483763 FOXD4L4Q8WXT5 416 aaPredicted RBP10.57□□□□□ -0.72
CDC42SE1-204ENST00000483763 TPCN1Q9ULQ1 816 aa10.57□□□□□ -0.72
CDC42SE1-204ENST00000483763 NFIXQ14938 502 aa10.57□□□□□ -0.72
CDC42SE1-204ENST00000483763 WASHC4Q2M389 1173 aa10.57□□□□□ -0.72
CDC42SE1-204ENST00000483763 TFCP2L1Q9NZI6 479 aa10.57□□□□□ -0.72
CDC42SE1-204ENST00000483763 IDH1O75874 414 aaKnown RBP10.56□□□□□ -0.72
CDC42SE1-204ENST00000483763 HSP90B1P14625 803 aaKnown RBP10.56□□□□□ -0.72
CDC42SE1-204ENST00000483763 RPS6KB1P23443 525 aa10.56□□□□□ -0.72
CDC42SE1-204ENST00000483763 TM4SF1P30408 202 aa10.56□□□□□ -0.72
CDC42SE1-204ENST00000483763 NUCB2P80303 420 aa10.56□□□□□ -0.72
CDC42SE1-204ENST00000483763 TOB2Q14106 344 aaPredicted RBP10.56□□□□□ -0.72
CDC42SE1-204ENST00000483763 SLC9C2Q5TAH2 1124 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms