RNA–Protein interactions for RNA: ENST00000483525.2

SAMMSON-201, survival associated mitochondrial melanoma specific oncogenic non-coding RNA, humanhuman

TSL 1 (best)

Gene SAMMSON, Length 2,055 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMMSON-201ENST00000483525 TRAPPC3LQ5T215 181 aa13.36□□□□□ -0.27
SAMMSON-201ENST00000483525 C3orf67Q6ZVT6 689 aa13.36□□□□□ -0.27
SAMMSON-201ENST00000483525 HELBQ8NG08 1087 aaPredicted RBP13.36□□□□□ -0.27
SAMMSON-201ENST00000483525 ZSWIM6Q9HCJ5 1215 aa13.36□□□□□ -0.27
SAMMSON-201ENST00000483525 TAF1P21675 1872 aa13.35□□□□□ -0.27
SAMMSON-201ENST00000483525 RNF113AO15541 343 aaKnown RBP13.35□□□□□ -0.27
SAMMSON-201ENST00000483525 KCNJ4P48050 445 aa13.35□□□□□ -0.27
SAMMSON-201ENST00000483525 SLC27A3Q5K4L6 730 aa13.35□□□□□ -0.27
SAMMSON-201ENST00000483525 CCDC102BQ68D86 513 aa13.35□□□□□ -0.27
SAMMSON-201ENST00000483525 CCDC129Q6ZRS4 1044 aa13.35□□□□□ -0.27
SAMMSON-201ENST00000483525 CDC5LQ99459 802 aaKnown RBP13.35□□□□□ -0.27
SAMMSON-201ENST00000483525 HMG20BQ9P0W2 317 aa13.35□□□□□ -0.27
SAMMSON-201ENST00000483525 RPAP1Q9BWH6 1393 aaPredicted RBP13.35□□□□□ -0.27
SAMMSON-201ENST00000483525 CASTP20810 708 aaKnown RBP13.35□□□□□ -0.27
SAMMSON-201ENST00000483525 LRRFIP1Q32MZ4 808 aaKnown RBP13.35□□□□□ -0.27
SAMMSON-201ENST00000483525 SLFNL1Q499Z3 407 aa13.35□□□□□ -0.27
SAMMSON-201ENST00000483525 RNF20Q5VTR2 975 aa13.35□□□□□ -0.27
SAMMSON-201ENST00000483525 ZGPATQ8N5A5 531 aaKnown RBP13.35□□□□□ -0.27
SAMMSON-201ENST00000483525 ZFYP08048 801 aaPredicted RBP13.34□□□□□ -0.27
SAMMSON-201ENST00000483525 RFC4P35249 363 aa13.34□□□□□ -0.27
SAMMSON-201ENST00000483525 PHKA1P46020 1223 aa13.34□□□□□ -0.27
SAMMSON-201ENST00000483525 RBM6P78332 1123 aaKnown RBP13.34□□□□□ -0.27
SAMMSON-201ENST00000483525 ZNF772Q68DY9 489 aaPredicted RBP13.34□□□□□ -0.27
SAMMSON-201ENST00000483525 PI16Q6UXB8 463 aa13.34□□□□□ -0.27
SAMMSON-201ENST00000483525 INTS4Q96HW7 963 aaKnown RBP13.34□□□□□ -0.27
SAMMSON-201ENST00000483525 A0A1B0GUL6 1792 aa13.34□□□□□ -0.27
SAMMSON-201ENST00000483525 TRIM37O94972 964 aa13.33□□□□□ -0.27
SAMMSON-201ENST00000483525 CYP2E1P05181 493 aaPredicted RBP13.33□□□□□ -0.27
SAMMSON-201ENST00000483525 UQCRFS1P1P0C7P4 283 aa13.33□□□□□ -0.27
SAMMSON-201ENST00000483525 SLC5A1P13866 664 aa13.33□□□□□ -0.27
SAMMSON-201ENST00000483525 GTF2E1P29083 439 aaPredicted RBP13.33□□□□□ -0.27
SAMMSON-201ENST00000483525 VASPP50552 380 aaPredicted RBP13.33□□□□□ -0.27
SAMMSON-201ENST00000483525 CHRNDQ07001 517 aa13.33□□□□□ -0.27
SAMMSON-201ENST00000483525 VPS53Q5VIR6 699 aa13.33□□□□□ -0.27
SAMMSON-201ENST00000483525 TPTE2Q6XPS3 522 aa13.33□□□□□ -0.27
SAMMSON-201ENST00000483525 RUFY3Q7L099 469 aa13.33□□□□□ -0.27
SAMMSON-201ENST00000483525 NBPF5PQ86XG9 351 aaPredicted RBP13.33□□□□□ -0.27
SAMMSON-201ENST00000483525 JAKMIP1Q96N16 626 aaKnown RBP13.33□□□□□ -0.27
SAMMSON-201ENST00000483525 DSCC1Q9BVC3 393 aa13.33□□□□□ -0.27
SAMMSON-201ENST00000483525 MYO5AQ9Y4I1 1855 aaKnown RBP13.33□□□□□ -0.28
SAMMSON-201ENST00000483525 SNAP23O00161 211 aa13.33□□□□□ -0.28
SAMMSON-201ENST00000483525 PHF14O94880 888 aa13.33□□□□□ -0.28
SAMMSON-201ENST00000483525 CPA1P15085 419 aa13.33□□□□□ -0.28
SAMMSON-201ENST00000483525 AK2P54819 239 aa13.33□□□□□ -0.28
SAMMSON-201ENST00000483525 ANKRD18AQ8IVF6 992 aa13.33□□□□□ -0.28
SAMMSON-201ENST00000483525 TNPO1Q92973 898 aaKnown RBP13.33□□□□□ -0.28
SAMMSON-201ENST00000483525 OSBP2Q969R2 916 aa13.33□□□□□ -0.28
SAMMSON-201ENST00000483525 BSDC1Q9NW68 430 aaPredicted RBP13.33□□□□□ -0.28
SAMMSON-201ENST00000483525 U3KPZ7 1027 aaPredicted RBP13.33□□□□□ -0.28
SAMMSON-201ENST00000483525 MAST3O60307 1309 aa13.33□□□□□ -0.28
SAMMSON-201ENST00000483525 PSMA5P28066 241 aa13.32□□□□□ -0.28
SAMMSON-201ENST00000483525 MCM4P33991 863 aa13.32□□□□□ -0.28
SAMMSON-201ENST00000483525 TTF1Q15361 905 aaPredicted RBP13.32□□□□□ -0.28
SAMMSON-201ENST00000483525 NLRP3Q96P20 1036 aa13.32□□□□□ -0.28
SAMMSON-201ENST00000483525 CYP46A1Q9Y6A2 500 aa13.32□□□□□ -0.28
SAMMSON-201ENST00000483525 TAF6LQ9Y6J9 622 aa13.32□□□□□ -0.28
SAMMSON-201ENST00000483525 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.32□□□□□ -0.28
SAMMSON-201ENST00000483525 HSPD1P10809 573 aaKnown RBP13.32□□□□□ -0.28
SAMMSON-201ENST00000483525 CARMIL3Q8ND23 1372 aa13.31□□□□□ -0.28
SAMMSON-201ENST00000483525 M0R2C6 588 aa13.31□□□□□ -0.28
SAMMSON-201ENST00000483525 CYP21A2P08686 494 aa13.31□□□□□ -0.28
SAMMSON-201ENST00000483525 NUCB2P80303 420 aa13.31□□□□□ -0.28
SAMMSON-201ENST00000483525 CLEC17AQ6ZS10 378 aa13.31□□□□□ -0.28
SAMMSON-201ENST00000483525 NOL8Q76FK4 1167 aaKnown RBP13.31□□□□□ -0.28
SAMMSON-201ENST00000483525 PROM2Q8N271 834 aa13.31□□□□□ -0.28
SAMMSON-201ENST00000483525 APPBP2Q92624 585 aa13.31□□□□□ -0.28
SAMMSON-201ENST00000483525 PDRG1Q9NUG6 133 aa13.31□□□□□ -0.28
SAMMSON-201ENST00000483525 LIMCH1Q9UPQ0 1083 aa13.31□□□□□ -0.28
SAMMSON-201ENST00000483525 DOCK2Q92608 1830 aa13.3□□□□□ -0.28
SAMMSON-201ENST00000483525 COL9A3Q14050 684 aaPredicted RBP13.3□□□□□ -0.28
SAMMSON-201ENST00000483525 KRT32Q14532 448 aa13.3□□□□□ -0.28
SAMMSON-201ENST00000483525 NFIXQ14938 502 aa13.3□□□□□ -0.28
SAMMSON-201ENST00000483525 PIAS4Q8N2W9 510 aaPredicted RBP13.3□□□□□ -0.28
SAMMSON-201ENST00000483525 CELF1Q92879 486 aaKnown RBP13.3□□□□□ -0.28
SAMMSON-201ENST00000483525 ALDH8A1Q9H2A2 487 aaPredicted RBP13.3□□□□□ -0.28
SAMMSON-201ENST00000483525 MINPP1Q9UNW1 487 aa13.3□□□□□ -0.28
SAMMSON-201ENST00000483525 TM4SF1P30408 202 aa13.3□□□□□ -0.28
SAMMSON-201ENST00000483525 ADD2P35612 726 aa13.3□□□□□ -0.28
SAMMSON-201ENST00000483525 UBE4AQ14139 1066 aa13.3□□□□□ -0.28
SAMMSON-201ENST00000483525 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.3□□□□□ -0.28
SAMMSON-201ENST00000483525 PUS7LQ9H0K6 701 aaKnown RBP13.3□□□□□ -0.28
SAMMSON-201ENST00000483525 RPS8P62241 208 aaKnown RBP13.29□□□□□ -0.28
SAMMSON-201ENST00000483525 RASGRF1Q13972 1273 aa13.29□□□□□ -0.28
SAMMSON-201ENST00000483525 ZSCAN25Q6NSZ9 544 aa13.29□□□□□ -0.28
SAMMSON-201ENST00000483525 BLOC1S2Q6QNY1 142 aa13.29□□□□□ -0.28
SAMMSON-201ENST00000483525 SPATA5Q8NB90 893 aa13.29□□□□□ -0.28
SAMMSON-201ENST00000483525 PIH1D3Q9NQM4 214 aaKnown RBP13.29□□□□□ -0.28
SAMMSON-201ENST00000483525 FOXP2O15409 715 aa13.28□□□□□ -0.28
SAMMSON-201ENST00000483525 GYS1P13807 737 aa13.28□□□□□ -0.28
SAMMSON-201ENST00000483525 RPS6KB1P23443 525 aa13.28□□□□□ -0.28
SAMMSON-201ENST00000483525 HMGB2P26583 209 aaKnown RBP13.28□□□□□ -0.28
SAMMSON-201ENST00000483525 BCAMP50895 628 aa13.28□□□□□ -0.28
SAMMSON-201ENST00000483525 PKP1Q13835 747 aa13.28□□□□□ -0.28
SAMMSON-201ENST00000483525 UBE3CQ15386 1083 aa13.28□□□□□ -0.28
SAMMSON-201ENST00000483525 TXNRD1Q16881 649 aa13.28□□□□□ -0.28
SAMMSON-201ENST00000483525 WASHC4Q2M389 1173 aa13.28□□□□□ -0.28
SAMMSON-201ENST00000483525 TNRC6CQ9HCJ0 1690 aaKnown RBP13.28□□□□□ -0.28
SAMMSON-201ENST00000483525 LAMA4Q16363 1823 aa13.28□□□□□ -0.28
SAMMSON-201ENST00000483525 ZNF804BA4D1E1 1349 aa13.28□□□□□ -0.28
SAMMSON-201ENST00000483525 PLSCR1O15162 318 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms