RNA–Protein interactions for RNA: ENST00000483148.5

APTX-226, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,764 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-226ENST00000483148 KLRG2A4D1S0 409 aaPredicted RBP12.1□□□□□ -0.47
APTX-226ENST00000483148 CDK11BP21127 795 aaKnown RBP12.1□□□□□ -0.47
APTX-226ENST00000483148 BRPF1P55201 1214 aaPredicted RBP12.1□□□□□ -0.47
APTX-226ENST00000483148 MLLT1Q03111 559 aaPredicted RBP12.1□□□□□ -0.47
APTX-226ENST00000483148 ZNF771Q7L3S4 317 aaPredicted RBP12.1□□□□□ -0.47
APTX-226ENST00000483148 DZIP3Q86Y13 1208 aaKnown RBP12.1□□□□□ -0.47
APTX-226ENST00000483148 CREBRFQ8IUR6 639 aa12.1□□□□□ -0.47
APTX-226ENST00000483148 ZNF428Q96B54 188 aa12.1□□□□□ -0.47
APTX-226ENST00000483148 NOB1Q9ULX3 412 aaKnown RBP12.1□□□□□ -0.47
APTX-226ENST00000483148 USP16Q9Y5T5 823 aa12.1□□□□□ -0.47
APTX-226ENST00000483148 HOXB7P09629 217 aa12.09□□□□□ -0.47
APTX-226ENST00000483148 NPR1P16066 1061 aa12.09□□□□□ -0.47
APTX-226ENST00000483148 ANKRD45Q5TZF3 282 aa12.09□□□□□ -0.47
APTX-226ENST00000483148 PNMA8AQ86V59 439 aaPredicted RBP12.09□□□□□ -0.47
APTX-226ENST00000483148 NBPF5PQ86XG9 351 aaPredicted RBP12.09□□□□□ -0.47
APTX-226ENST00000483148 C8orf58Q8NAV2 365 aa12.09□□□□□ -0.47
APTX-226ENST00000483148 SSH1Q8WYL5 1049 aa12.09□□□□□ -0.47
APTX-226ENST00000483148 DDX21Q9NR30 783 aaKnown RBP eCLIP12.09□□□□□ -0.47
APTX-226ENST00000483148 TSKSQ9UJT2 592 aa12.09□□□□□ -0.47
APTX-226ENST00000483148 ARFGEF2Q9Y6D5 1785 aa12.09□□□□□ -0.47
APTX-226ENST00000483148 IARSP41252 1262 aaKnown RBP12.08□□□□□ -0.48
APTX-226ENST00000483148 MCM2P49736 904 aa12.08□□□□□ -0.48
APTX-226ENST00000483148 EXOSC9Q06265 439 aaKnown RBP12.08□□□□□ -0.48
APTX-226ENST00000483148 CST9Q5W186 159 aa12.08□□□□□ -0.48
APTX-226ENST00000483148 CYP4F22Q6NT55 531 aa12.08□□□□□ -0.48
APTX-226ENST00000483148 TSPYL6Q8N831 410 aa12.08□□□□□ -0.48
APTX-226ENST00000483148 CAPNS2Q96L46 248 aa12.08□□□□□ -0.48
APTX-226ENST00000483148 ZDHHC9Q9Y397 364 aa12.08□□□□□ -0.48
APTX-226ENST00000483148 RTKN2Q8IZC4 609 aa12.07□□□□□ -0.48
APTX-226ENST00000483148 USP26Q9BXU7 913 aa12.07□□□□□ -0.48
APTX-226ENST00000483148 EPS15P42566 896 aa12.07□□□□□ -0.48
APTX-226ENST00000483148 GRM1Q13255 1194 aa12.07□□□□□ -0.48
APTX-226ENST00000483148 TWISTNBQ3B726 338 aaPredicted RBP12.07□□□□□ -0.48
APTX-226ENST00000483148 INTS3Q68E01 1043 aaKnown RBP12.07□□□□□ -0.48
APTX-226ENST00000483148 GPC2Q8N158 579 aa12.07□□□□□ -0.48
APTX-226ENST00000483148 GPR101Q96P66 508 aaPredicted RBP12.07□□□□□ -0.48
APTX-226ENST00000483148 DNAJC2Q99543 621 aaKnown RBP12.07□□□□□ -0.48
APTX-226ENST00000483148 TSPYL1Q9H0U9 437 aa12.07□□□□□ -0.48
APTX-226ENST00000483148 FAM177BA6PVY3 158 aa12.06□□□□□ -0.48
APTX-226ENST00000483148 TRAF5O00463 557 aa12.06□□□□□ -0.48
APTX-226ENST00000483148 AOC2O75106 756 aa12.06□□□□□ -0.48
APTX-226ENST00000483148 CASC1Q6TDU7 716 aa12.06□□□□□ -0.48
APTX-226ENST00000483148 SLC51AQ86UW1 340 aa12.06□□□□□ -0.48
APTX-226ENST00000483148 RNF214Q8ND24 703 aa12.06□□□□□ -0.48
APTX-226ENST00000483148 CGNQ9P2M7 1197 aaKnown RBP12.06□□□□□ -0.48
APTX-226ENST00000483148 GJA3Q9Y6H8 435 aa12.06□□□□□ -0.48
APTX-226ENST00000483148 SPDYE4A6NLX3 237 aa12.05□□□□□ -0.48
APTX-226ENST00000483148 ELL2O00472 640 aaPredicted RBP12.05□□□□□ -0.48
APTX-226ENST00000483148 VAMP4O75379 141 aa12.05□□□□□ -0.48
APTX-226ENST00000483148 CLEC4GQ6UXB4 293 aa12.05□□□□□ -0.48
APTX-226ENST00000483148 PAXIP1Q6ZW49 1069 aaPredicted RBP12.05□□□□□ -0.48
APTX-226ENST00000483148 ARHGAP45Q92619 1136 aa12.05□□□□□ -0.48
APTX-226ENST00000483148 PCDH10Q9P2E7 1040 aa12.05□□□□□ -0.48
APTX-226ENST00000483148 COL4A5P29400 1685 aa12.05□□□□□ -0.48
APTX-226ENST00000483148 LTBP1Q14766 1721 aa12.05□□□□□ -0.48
APTX-226ENST00000483148 GOLGA6L6A8MZA4 724 aa12.05□□□□□ -0.48
APTX-226ENST00000483148 NBPF26B4DH59 902 aa12.05□□□□□ -0.48
APTX-226ENST00000483148 BRD1O95696 1058 aa12.05□□□□□ -0.48
APTX-226ENST00000483148 U2AF2P26368 475 aaKnown RBP eCLIP12.05□□□□□ -0.489e-15■■■■■ 42.9
APTX-226ENST00000483148 NBPF10Q6P3W6 841 aaKnown RBP12.05□□□□□ -0.48
APTX-226ENST00000483148 TPTE2Q6XPS3 522 aa12.05□□□□□ -0.48
APTX-226ENST00000483148 NBPF15Q8N660 670 aa12.05□□□□□ -0.48
APTX-226ENST00000483148 KIAA1524Q8TCG1 905 aa12.05□□□□□ -0.48
APTX-226ENST00000483148 RIOK3O14730 519 aaKnown RBP12.04□□□□□ -0.48
APTX-226ENST00000483148 SCNN1DP51172 638 aa12.04□□□□□ -0.48
APTX-226ENST00000483148 PKP1Q13835 747 aa12.04□□□□□ -0.48
APTX-226ENST00000483148 HLFQ16534 295 aa12.04□□□□□ -0.48
APTX-226ENST00000483148 HDGFL1Q5TGJ6 251 aa12.04□□□□□ -0.48
APTX-226ENST00000483148 TSC1Q92574 1164 aa12.04□□□□□ -0.48
APTX-226ENST00000483148 NIP7Q9Y221 180 aaKnown RBP eCLIP12.04□□□□□ -0.48
APTX-226ENST00000483148 MORC2Q9Y6X9 1032 aaPredicted RBP12.04□□□□□ -0.48
APTX-226ENST00000483148 SNED1Q8TER0 1413 aa12.04□□□□□ -0.48
APTX-226ENST00000483148 BCORQ6W2J9 1755 aa12.04□□□□□ -0.48
APTX-226ENST00000483148 AK9Q5TCS8 1911 aa12.03□□□□□ -0.48
APTX-226ENST00000483148 ADCY5O95622 1261 aa12.03□□□□□ -0.48
APTX-226ENST00000483148 EIF2S2P20042 333 aaKnown RBP12.03□□□□□ -0.48
APTX-226ENST00000483148 ECE1P42892 770 aa12.03□□□□□ -0.48
APTX-226ENST00000483148 TIGD1Q96MW7 591 aa12.03□□□□□ -0.48
APTX-226ENST00000483148 PSMD1Q99460 953 aa12.03□□□□□ -0.48
APTX-226ENST00000483148 BEGAINQ9BUH8 593 aa12.03□□□□□ -0.48
APTX-226ENST00000483148 MCOLN1Q9GZU1 580 aa12.03□□□□□ -0.48
APTX-226ENST00000483148 CALCOCO1Q9P1Z2 691 aa12.03□□□□□ -0.48
APTX-226ENST00000483148 USP25Q9UHP3 1055 aa12.03□□□□□ -0.48
APTX-226ENST00000483148 DDX41Q9UJV9 622 aaKnown RBP12.03□□□□□ -0.48
APTX-226ENST00000483148 NSFL1CQ9UNZ2 370 aaKnown RBP12.03□□□□□ -0.48
APTX-226ENST00000483148 TLL2Q9Y6L7 1015 aa12.03□□□□□ -0.48
APTX-226ENST00000483148 ZBTB7BO15156 539 aaPredicted RBP12.02□□□□□ -0.48
APTX-226ENST00000483148 REC8O95072 547 aa12.02□□□□□ -0.48
APTX-226ENST00000483148 SLFN14P0C7P3 912 aa12.02□□□□□ -0.48
APTX-226ENST00000483148 ALDH1B1P30837 517 aa12.02□□□□□ -0.48
APTX-226ENST00000483148 PDIA6Q15084 440 aa12.02□□□□□ -0.48
APTX-226ENST00000483148 CCDC183Q5T5S1 534 aa12.02□□□□□ -0.48
APTX-226ENST00000483148 TTC22Q5TAA0 569 aa12.02□□□□□ -0.48
APTX-226ENST00000483148 LRP10Q7Z4F1 713 aa12.02□□□□□ -0.48
APTX-226ENST00000483148 JDP2Q8WYK2 163 aa12.02□□□□□ -0.48
APTX-226ENST00000483148 JARID2Q92833 1246 aaPredicted RBP12.02□□□□□ -0.48
APTX-226ENST00000483148 INTS4Q96HW7 963 aaKnown RBP12.02□□□□□ -0.48
APTX-226ENST00000483148 CHMP4AQ9BY43 222 aa12.02□□□□□ -0.48
APTX-226ENST00000483148 CTNNA3Q9UI47 895 aa12.02□□□□□ -0.48
APTX-226ENST00000483148 KDM4AO75164 1064 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms