RNA–Protein interactions for RNA: ENST00000483142.5

HDAC9-224, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 305 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-224ENST00000483142 IFIT5Q13325 482 aaKnown RBP5.69□□□□□ -1.5
HDAC9-224ENST00000483142 CCDC57Q2TAC2 916 aa5.69□□□□□ -1.5
HDAC9-224ENST00000483142 HSP90AB4PQ58FF6 505 aa5.69□□□□□ -1.5
HDAC9-224ENST00000483142 CC2D2BQ6DHV5 1058 aa5.69□□□□□ -1.5
HDAC9-224ENST00000483142 C15orf52Q6ZUT6 534 aaKnown RBP5.69□□□□□ -1.5
HDAC9-224ENST00000483142 ERC1Q8IUD2 1116 aa5.69□□□□□ -1.5
HDAC9-224ENST00000483142 ZC3H15Q8WU90 426 aaKnown RBP5.69□□□□□ -1.5
HDAC9-224ENST00000483142 JARID2Q92833 1246 aaPredicted RBP5.69□□□□□ -1.5
HDAC9-224ENST00000483142 RPGRQ92834 1020 aaKnown RBP5.69□□□□□ -1.5
HDAC9-224ENST00000483142 CNKSR1Q969H4 720 aa5.69□□□□□ -1.5
HDAC9-224ENST00000483142 SEC31BQ9NQW1 1179 aa5.69□□□□□ -1.5
HDAC9-224ENST00000483142 EMILIN3Q9NT22 766 aa5.69□□□□□ -1.5
HDAC9-224ENST00000483142 BSDC1Q9NW68 430 aaPredicted RBP5.69□□□□□ -1.5
HDAC9-224ENST00000483142 PPP4R2Q9NY27 417 aa5.69□□□□□ -1.5
HDAC9-224ENST00000483142 AKAP11Q9UKA4 1901 aa5.69□□□□□ -1.5
HDAC9-224ENST00000483142 COL1A1P02452 1464 aaPredicted RBP5.69□□□□□ -1.5
HDAC9-224ENST00000483142 ZNF804BA4D1E1 1349 aa5.69□□□□□ -1.5
HDAC9-224ENST00000483142 MROH5Q6ZUA9 1318 aa5.69□□□□□ -1.5
HDAC9-224ENST00000483142 FAM177BA6PVY3 158 aa5.68□□□□□ -1.5
HDAC9-224ENST00000483142 H0YIN7 160 aa5.68□□□□□ -1.5
HDAC9-224ENST00000483142 KIF3CO14782 793 aa5.68□□□□□ -1.5
HDAC9-224ENST00000483142 PPEF1O14829 653 aaPredicted RBP5.68□□□□□ -1.5
HDAC9-224ENST00000483142 ATMINO43313 823 aaPredicted RBP5.68□□□□□ -1.5
HDAC9-224ENST00000483142 RAB11FIP3O75154 756 aa5.68□□□□□ -1.5
HDAC9-224ENST00000483142 BBOX1O75936 387 aa5.68□□□□□ -1.5
HDAC9-224ENST00000483142 SASH1O94885 1247 aa5.68□□□□□ -1.5
HDAC9-224ENST00000483142 DPEP1P16444 411 aa5.68□□□□□ -1.5
HDAC9-224ENST00000483142 FGFR2P21802 821 aa5.68□□□□□ -1.5
HDAC9-224ENST00000483142 IGHMBP2P38935 993 aaKnown RBP5.68□□□□□ -1.5
HDAC9-224ENST00000483142 IL15P40933 162 aaPredicted RBP5.68□□□□□ -1.5
HDAC9-224ENST00000483142 GRIPAP1Q4V328 841 aa5.68□□□□□ -1.5
HDAC9-224ENST00000483142 RTL5Q5HYW3 569 aaPredicted RBP5.68□□□□□ -1.5
HDAC9-224ENST00000483142 SOGA3Q5TF21 947 aa5.68□□□□□ -1.5
HDAC9-224ENST00000483142 PRPF40BQ6NWY9 871 aaKnown RBP5.68□□□□□ -1.5
HDAC9-224ENST00000483142 DDX46Q7L014 1031 aaKnown RBP5.68□□□□□ -1.5
HDAC9-224ENST00000483142 CENPQQ7L2Z9 268 aaPredicted RBP5.68□□□□□ -1.5
HDAC9-224ENST00000483142 C2CD5Q86YS7 1000 aa5.68□□□□□ -1.5
HDAC9-224ENST00000483142 ANKRD18AQ8IVF6 992 aa5.68□□□□□ -1.5
HDAC9-224ENST00000483142 MICALL2Q8IY33 904 aa5.68□□□□□ -1.5
HDAC9-224ENST00000483142 KIF1BPQ96EK5 621 aa5.68□□□□□ -1.5
HDAC9-224ENST00000483142 RBM17Q96I25 401 aaKnown RBP5.68□□□□□ -1.5
HDAC9-224ENST00000483142 RTFDC1Q9BY42 306 aaPredicted RBP5.68□□□□□ -1.5
HDAC9-224ENST00000483142 FHDC1Q9C0D6 1143 aaPredicted RBP5.68□□□□□ -1.5
HDAC9-224ENST00000483142 ATP6V0A2Q9Y487 856 aa5.68□□□□□ -1.5
HDAC9-224ENST00000483142 RIPOR2Q9Y4F9 1068 aa5.68□□□□□ -1.5
HDAC9-224ENST00000483142 SBF1O95248 1867 aa5.68□□□□□ -1.5
HDAC9-224ENST00000483142 XDHP47989 1333 aa5.68□□□□□ -1.5
HDAC9-224ENST00000483142 AOX1Q06278 1338 aa5.68□□□□□ -1.5
HDAC9-224ENST00000483142 PDS5AQ29RF7 1337 aaKnown RBP5.68□□□□□ -1.5
HDAC9-224ENST00000483142 RFX7Q2KHR2 1363 aa5.67□□□□□ -1.5
HDAC9-224ENST00000483142 SCN9AQ15858 1988 aa5.67□□□□□ -1.5
HDAC9-224ENST00000483142 NPHP1O15259 732 aa5.67□□□□□ -1.5
HDAC9-224ENST00000483142 CHRNA5P30532 468 aa5.67□□□□□ -1.5
HDAC9-224ENST00000483142 ALDH1B1P30837 517 aa5.67□□□□□ -1.5
HDAC9-224ENST00000483142 RPS8P62241 208 aaKnown RBP5.67□□□□□ -1.5
HDAC9-224ENST00000483142 LRRC24Q50LG9 513 aa5.67□□□□□ -1.5
HDAC9-224ENST00000483142 CCDC93Q567U6 631 aa5.67□□□□□ -1.5
HDAC9-224ENST00000483142 SP8Q8IXZ3 490 aa5.67□□□□□ -1.5
HDAC9-224ENST00000483142 CCDC24Q8N4L8 307 aa5.67□□□□□ -1.5
HDAC9-224ENST00000483142 NLGN2Q8NFZ4 835 aa5.67□□□□□ -1.5
HDAC9-224ENST00000483142 KLHDC4Q8TBB5 520 aa5.67□□□□□ -1.5
HDAC9-224ENST00000483142 RHPN1Q8TCX5 695 aa5.67□□□□□ -1.5
HDAC9-224ENST00000483142 PSMD1Q99460 953 aa5.67□□□□□ -1.5
HDAC9-224ENST00000483142 SYT17Q9BSW7 474 aa5.67□□□□□ -1.5
HDAC9-224ENST00000483142 RWDD1Q9H446 243 aaPredicted RBP5.67□□□□□ -1.5
HDAC9-224ENST00000483142 PA2G4Q9UQ80 394 aaKnown RBP5.67□□□□□ -1.5
HDAC9-224ENST00000483142 MYH7P12883 1935 aa5.67□□□□□ -1.5
HDAC9-224ENST00000483142 DDX60LQ5H9U9 1706 aaKnown RBP5.66□□□□□ -1.5
HDAC9-224ENST00000483142 IGSF3O75054 1194 aa5.66□□□□□ -1.5
HDAC9-224ENST00000483142 SURF6O75683 361 aaKnown RBP5.66□□□□□ -1.5
HDAC9-224ENST00000483142 PDE8BO95263 885 aa5.66□□□□□ -1.5
HDAC9-224ENST00000483142 IGHDP01880 384 aa5.66□□□□□ -1.5
HDAC9-224ENST00000483142 NUCB1Q02818 461 aa5.66□□□□□ -1.5
HDAC9-224ENST00000483142 CHRNDQ07001 517 aa5.66□□□□□ -1.5
HDAC9-224ENST00000483142 DSG2Q14126 1118 aa5.66□□□□□ -1.5
HDAC9-224ENST00000483142 UBE4AQ14139 1066 aa5.66□□□□□ -1.5
HDAC9-224ENST00000483142 PUM3Q15397 648 aaKnown RBP5.66□□□□□ -1.5
HDAC9-224ENST00000483142 TNNI3KQ59H18 835 aa5.66□□□□□ -1.5
HDAC9-224ENST00000483142 PPP1R15BQ5SWA1 713 aa5.66□□□□□ -1.5
HDAC9-224ENST00000483142 LDHAL6AQ6ZMR3 332 aa5.66□□□□□ -1.5
HDAC9-224ENST00000483142 SLC51AQ86UW1 340 aa5.66□□□□□ -1.5
HDAC9-224ENST00000483142 TTLL6Q8N841 843 aa5.66□□□□□ -1.5
HDAC9-224ENST00000483142 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.66□□□□□ -1.5
HDAC9-224ENST00000483142 ZNF594Q96JF6 807 aaPredicted RBP5.66□□□□□ -1.5
HDAC9-224ENST00000483142 ZNF512BQ96KM6 892 aaPredicted RBP5.66□□□□□ -1.5
HDAC9-224ENST00000483142 PUS3Q9BZE2 481 aaKnown RBP5.66□□□□□ -1.5
HDAC9-224ENST00000483142 ANKRD2Q9GZV1 360 aa5.66□□□□□ -1.5
HDAC9-224ENST00000483142 VPS33BQ9H267 617 aa5.66□□□□□ -1.5
HDAC9-224ENST00000483142 PIM2Q9P1W9 311 aa5.66□□□□□ -1.5
HDAC9-224ENST00000483142 MINPP1Q9UNW1 487 aa5.66□□□□□ -1.5
HDAC9-224ENST00000483142 EXOC6BQ9Y2D4 811 aa5.66□□□□□ -1.5
HDAC9-224ENST00000483142 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.66□□□□□ -1.5
HDAC9-224ENST00000483142 FPGT-TNNI3KV9GXZ4 949 aa5.66□□□□□ -1.5
HDAC9-224ENST00000483142 CHD4Q14839 1912 aa5.66□□□□□ -1.5
HDAC9-224ENST00000483142 NFKBIEO00221 500 aa5.65□□□□□ -1.5
HDAC9-224ENST00000483142 ZMYND10O75800 440 aa5.65□□□□□ -1.5
HDAC9-224ENST00000483142 ATP2B4P23634 1241 aa5.65□□□□□ -1.5
HDAC9-224ENST00000483142 ARID4AP29374 1257 aaPredicted RBP5.65□□□□□ -1.5
HDAC9-224ENST00000483142 MLLT3P42568 568 aaPredicted RBP5.65□□□□□ -1.5
HDAC9-224ENST00000483142 CLCN6P51797 869 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms