RNA–Protein interactions for RNA: ENST00000482871.5

MSL3-215, Transcript of MSL complex subunit 3, humanhuman

TSL 3

Gene MSL3, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-215ENST00000482871 PDE3BQ13370 1112 aa10.32□□□□□ -0.76
MSL3-215ENST00000482871 IP6K1Q92551 441 aa10.32□□□□□ -0.76
MSL3-215ENST00000482871 TRPC5Q9UL62 973 aaPredicted RBP10.32□□□□□ -0.76
MSL3-215ENST00000482871 CAMTA1Q9Y6Y1 1673 aa10.31□□□□□ -0.76
MSL3-215ENST00000482871 BCL9LQ86UU0 1499 aa10.31□□□□□ -0.76
MSL3-215ENST00000482871 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.31□□□□□ -0.76
MSL3-215ENST00000482871 TRAF7Q6Q0C0 670 aa10.31□□□□□ -0.76
MSL3-215ENST00000482871 TRIM50Q86XT4 487 aa10.31□□□□□ -0.76
MSL3-215ENST00000482871 LTV1Q96GA3 475 aaPredicted RBP10.31□□□□□ -0.76
MSL3-215ENST00000482871 ZNF594Q96JF6 807 aaPredicted RBP10.31□□□□□ -0.76
MSL3-215ENST00000482871 POLKQ9UBT6 870 aa10.31□□□□□ -0.76
MSL3-215ENST00000482871 RGS17Q9UGC6 210 aaPredicted RBP10.31□□□□□ -0.76
MSL3-215ENST00000482871 EMILIN1Q9Y6C2 1016 aa10.31□□□□□ -0.76
MSL3-215ENST00000482871 LMO7Q8WWI1 1683 aa10.31□□□□□ -0.76
MSL3-215ENST00000482871 NRAPQ86VF7 1730 aa10.3□□□□□ -0.76
MSL3-215ENST00000482871 NR3C2P08235 984 aa10.3□□□□□ -0.76
MSL3-215ENST00000482871 HOXC9P31274 260 aa10.3□□□□□ -0.76
MSL3-215ENST00000482871 ATP1A2P50993 1020 aa10.3□□□□□ -0.76
MSL3-215ENST00000482871 CLDN10P78369 228 aa10.3□□□□□ -0.76
MSL3-215ENST00000482871 DNAAF2Q9NVR5 837 aaKnown RBP10.3□□□□□ -0.76
MSL3-215ENST00000482871 FLT4P35916 1363 aa10.29□□□□□ -0.76
MSL3-215ENST00000482871 KIF24Q5T7B8 1368 aa10.29□□□□□ -0.76
MSL3-215ENST00000482871 ABCC6O95255 1503 aa10.29□□□□□ -0.76
MSL3-215ENST00000482871 ST8SIA5O15466 376 aa10.29□□□□□ -0.76
MSL3-215ENST00000482871 AVPP01185 164 aa10.29□□□□□ -0.76
MSL3-215ENST00000482871 CDK11BP21127 795 aaKnown RBP10.29□□□□□ -0.76
MSL3-215ENST00000482871 RXRBP28702 533 aa10.29□□□□□ -0.76
MSL3-215ENST00000482871 WDR4P57081 412 aaKnown RBP10.29□□□□□ -0.76
MSL3-215ENST00000482871 VPS72Q15906 364 aa10.29□□□□□ -0.76
MSL3-215ENST00000482871 HSP90AB2PQ58FF8 381 aa10.29□□□□□ -0.76
MSL3-215ENST00000482871 INTS6LQ5JSJ4 861 aaKnown RBP10.29□□□□□ -0.76
MSL3-215ENST00000482871 POTEAQ6S8J7 498 aa10.29□□□□□ -0.76
MSL3-215ENST00000482871 TOM1L2Q6ZVM7 507 aa10.29□□□□□ -0.76
MSL3-215ENST00000482871 TAS1R3Q7RTX0 852 aa10.29□□□□□ -0.76
MSL3-215ENST00000482871 CCDC116Q8IYX3 515 aa10.29□□□□□ -0.76
MSL3-215ENST00000482871 FAM177A1Q8N128 213 aaPredicted RBP10.29□□□□□ -0.76
MSL3-215ENST00000482871 LARGE2Q8N3Y3 721 aa10.29□□□□□ -0.76
MSL3-215ENST00000482871 DRC1Q96MC2 740 aa10.29□□□□□ -0.76
MSL3-215ENST00000482871 BLMP54132 1417 aaPredicted RBP10.29□□□□□ -0.76
MSL3-215ENST00000482871 COL5A2P05997 1499 aaPredicted RBP10.29□□□□□ -0.76
MSL3-215ENST00000482871 RTL1A6NKG5 1358 aa10.28□□□□□ -0.76
MSL3-215ENST00000482871 PEAK1Q9H792 1746 aa10.28□□□□□ -0.76
MSL3-215ENST00000482871 AXIN1O15169 862 aa10.28□□□□□ -0.76
MSL3-215ENST00000482871 GIGYF1O75420 1035 aaPredicted RBP10.28□□□□□ -0.76
MSL3-215ENST00000482871 ABL1P00519 1130 aa10.28□□□□□ -0.76
MSL3-215ENST00000482871 MTHFSP49914 203 aa10.28□□□□□ -0.76
MSL3-215ENST00000482871 RBM6P78332 1123 aaKnown RBP10.28□□□□□ -0.76
MSL3-215ENST00000482871 FBXO33Q7Z6M2 555 aa10.28□□□□□ -0.76
MSL3-215ENST00000482871 ANKRD24Q8TF21 1146 aa10.28□□□□□ -0.76
MSL3-215ENST00000482871 NLRP2Q9NX02 1062 aa10.28□□□□□ -0.76
MSL3-215ENST00000482871 NOD1Q9Y239 953 aa10.28□□□□□ -0.76
MSL3-215ENST00000482871 KAT6BQ8WYB5 2073 aa10.28□□□□□ -0.76
MSL3-215ENST00000482871 RGPD2P0DJD1 1756 aa10.28□□□□□ -0.76
MSL3-215ENST00000482871 WDR17Q8IZU2 1322 aa10.28□□□□□ -0.76
MSL3-215ENST00000482871 ATRNO75882 1429 aa10.27□□□□□ -0.77
MSL3-215ENST00000482871 H3BRB1 525 aa10.27□□□□□ -0.77
MSL3-215ENST00000482871 PRMT3O60678 531 aa10.27□□□□□ -0.77
MSL3-215ENST00000482871 ICMTO60725 284 aa10.27□□□□□ -0.77
MSL3-215ENST00000482871 SIX5Q8N196 739 aa10.27□□□□□ -0.77
MSL3-215ENST00000482871 SREK1Q8WXA9 508 aaKnown RBP10.27□□□□□ -0.77
MSL3-215ENST00000482871 TUT1Q9H6E5 874 aaKnown RBP10.27□□□□□ -0.77
MSL3-215ENST00000482871 CXXC1Q9P0U4 656 aaPredicted RBP10.27□□□□□ -0.77
MSL3-215ENST00000482871 SPATA31A5Q5VU36 1347 aa10.27□□□□□ -0.77
MSL3-215ENST00000482871 SPATA31A7Q8IWB4 1347 aa10.27□□□□□ -0.77
MSL3-215ENST00000482871 FAM208AQ9UK61 1670 aaKnown RBP10.26□□□□□ -0.77
MSL3-215ENST00000482871 CAPN5O15484 640 aaPredicted RBP10.26□□□□□ -0.77
MSL3-215ENST00000482871 DKK1O94907 266 aa10.26□□□□□ -0.77
MSL3-215ENST00000482871 ZIC2O95409 532 aaPredicted RBP10.26□□□□□ -0.77
MSL3-215ENST00000482871 PPP2R1AP30153 589 aa10.26□□□□□ -0.77
MSL3-215ENST00000482871 CTC1Q2NKJ3 1217 aa10.26□□□□□ -0.77
MSL3-215ENST00000482871 TCP11L2Q8N4U5 519 aa10.26□□□□□ -0.77
MSL3-215ENST00000482871 AAASQ9NRG9 546 aa10.26□□□□□ -0.77
MSL3-215ENST00000482871 SPATA31A1Q5TZJ5 1347 aa10.26□□□□□ -0.77
MSL3-215ENST00000482871 CRB1P82279 1406 aa10.25□□□□□ -0.77
MSL3-215ENST00000482871 IRX6P78412 446 aaPredicted RBP10.25□□□□□ -0.77
MSL3-215ENST00000482871 DHX9Q08211 1270 aaKnown RBP10.25□□□□□ -0.77
MSL3-215ENST00000482871 ZNF211Q13398 564 aaPredicted RBP10.25□□□□□ -0.77
MSL3-215ENST00000482871 WDR43Q15061 677 aaKnown RBP eCLIP10.25□□□□□ -0.77
MSL3-215ENST00000482871 OCLNQ16625 522 aa10.25□□□□□ -0.77
MSL3-215ENST00000482871 PPP1R26Q5T8A7 1209 aaPredicted RBP10.25□□□□□ -0.77
MSL3-215ENST00000482871 GLYCTKQ8IVS8 523 aa10.25□□□□□ -0.77
MSL3-215ENST00000482871 ITPKCQ96DU7 683 aa10.25□□□□□ -0.77
MSL3-215ENST00000482871 CFAP53Q96M91 514 aa10.25□□□□□ -0.77
MSL3-215ENST00000482871 CARD10Q9BWT7 1032 aa10.25□□□□□ -0.77
MSL3-215ENST00000482871 ZFAND3Q9H8U3 227 aa10.25□□□□□ -0.77
MSL3-215ENST00000482871 CDK12Q9NYV4 1490 aaPredicted RBP10.24□□□□□ -0.77
MSL3-215ENST00000482871 ZBTB7BO15156 539 aaPredicted RBP10.24□□□□□ -0.77
MSL3-215ENST00000482871 TIMP2P16035 220 aa10.24□□□□□ -0.77
MSL3-215ENST00000482871 MAPK1P28482 360 aa10.24□□□□□ -0.77
MSL3-215ENST00000482871 SEC13P55735 322 aa10.24□□□□□ -0.77
MSL3-215ENST00000482871 CCDC125Q86Z20 511 aa10.24□□□□□ -0.77
MSL3-215ENST00000482871 ASB16Q96NS5 453 aa10.24□□□□□ -0.77
MSL3-215ENST00000482871 THRAP3Q9Y2W1 955 aaKnown RBP10.24□□□□□ -0.77
MSL3-215ENST00000482871 RNF123Q5XPI4 1314 aa10.24□□□□□ -0.77
MSL3-215ENST00000482871 GLI3P10071 1580 aa10.23□□□□□ -0.77
MSL3-215ENST00000482871 ESPNB1AK53 854 aa10.23□□□□□ -0.77
MSL3-215ENST00000482871 LCE2BO14633 110 aa10.23□□□□□ -0.77
MSL3-215ENST00000482871 RECKO95980 971 aa10.23□□□□□ -0.77
MSL3-215ENST00000482871 EIF4A2Q14240 407 aaKnown RBP10.23□□□□□ -0.77
MSL3-215ENST00000482871 TSGA10IPQ3SY00 556 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms