RNA–Protein interactions for RNA: ENST00000482855.5

RPGR-208, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

TSL 2

Gene RPGR, Length 2,819 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-208ENST00000482855 ENGASEQ8NFI3 743 aa12.84□□□□□ -0.35
RPGR-208ENST00000482855 LRRC37A3O60309 1634 aa12.83□□□□□ -0.36
RPGR-208ENST00000482855 SASH3O75995 380 aa12.83□□□□□ -0.36
RPGR-208ENST00000482855 CERS3Q8IU89 383 aa12.83□□□□□ -0.36
RPGR-208ENST00000482855 GOLGA5Q8TBA6 731 aa12.83□□□□□ -0.36
RPGR-208ENST00000482855 ERCC4Q92889 916 aaPredicted RBP12.83□□□□□ -0.36
RPGR-208ENST00000482855 TAF6LQ9Y6J9 622 aa12.83□□□□□ -0.36
RPGR-208ENST00000482855 SOX12O15370 315 aa12.83□□□□□ -0.36
RPGR-208ENST00000482855 HSPA1LP34931 641 aa12.83□□□□□ -0.36
RPGR-208ENST00000482855 ADD1P35611 737 aaKnown RBP12.83□□□□□ -0.36
RPGR-208ENST00000482855 CC2D1AQ6P1N0 951 aaPredicted RBP12.83□□□□□ -0.36
RPGR-208ENST00000482855 CCDC34Q96HJ3 373 aa12.83□□□□□ -0.36
RPGR-208ENST00000482855 FTOQ9C0B1 505 aaKnown RBP eCLIP12.83□□□□□ -0.36
RPGR-208ENST00000482855 CASQ1P31415 396 aa12.82□□□□□ -0.36
RPGR-208ENST00000482855 ME1P48163 572 aa12.82□□□□□ -0.36
RPGR-208ENST00000482855 AACSQ86V21 672 aa12.82□□□□□ -0.36
RPGR-208ENST00000482855 ERC1Q8IUD2 1116 aa12.82□□□□□ -0.36
RPGR-208ENST00000482855 ZNF396Q96N95 335 aaPredicted RBP12.82□□□□□ -0.36
RPGR-208ENST00000482855 SDF4Q9BRK5 362 aa12.82□□□□□ -0.36
RPGR-208ENST00000482855 SNRKQ9NRH2 765 aa12.82□□□□□ -0.36
RPGR-208ENST00000482855 OVOS2A0A0J9YW53 1432 aa12.82□□□□□ -0.36
RPGR-208ENST00000482855 OVOS2Q6IE36 1432 aa12.82□□□□□ -0.36
RPGR-208ENST00000482855 A0A0D9SFI3 127 aa12.82□□□□□ -0.36
RPGR-208ENST00000482855 TRIM66O15016 1216 aa12.82□□□□□ -0.36
RPGR-208ENST00000482855 BRINP3Q76B58 766 aa12.82□□□□□ -0.36
RPGR-208ENST00000482855 FBXO18Q8NFZ0 1043 aa12.82□□□□□ -0.36
RPGR-208ENST00000482855 KRT32Q14532 448 aa12.81□□□□□ -0.36
RPGR-208ENST00000482855 CTR9Q6PD62 1173 aa12.81□□□□□ -0.36
RPGR-208ENST00000482855 TRIM65Q6PJ69 517 aa12.81□□□□□ -0.36
RPGR-208ENST00000482855 EXOC4Q96A65 974 aa12.81□□□□□ -0.36
RPGR-208ENST00000482855 USP28Q96RU2 1077 aa12.81□□□□□ -0.36
RPGR-208ENST00000482855 BPIFA3Q9BQP9 254 aa12.81□□□□□ -0.36
RPGR-208ENST00000482855 FSD1Q9BTV5 496 aa12.81□□□□□ -0.36
RPGR-208ENST00000482855 ARFGAP3Q9NP61 516 aa12.81□□□□□ -0.36
RPGR-208ENST00000482855 LCMT1Q9UIC8 334 aa12.81□□□□□ -0.36
RPGR-208ENST00000482855 ABCC6O95255 1503 aa12.81□□□□□ -0.36
RPGR-208ENST00000482855 GNAT3A8MTJ3 354 aa12.81□□□□□ -0.36
RPGR-208ENST00000482855 FOSBP53539 338 aa12.81□□□□□ -0.36
RPGR-208ENST00000482855 GNL2Q13823 731 aaKnown RBP12.81□□□□□ -0.36
RPGR-208ENST00000482855 TAF7Q15545 349 aaPredicted RBP12.81□□□□□ -0.36
RPGR-208ENST00000482855 TSGA10IPQ3SY00 556 aa12.81□□□□□ -0.36
RPGR-208ENST00000482855 NAA16Q6N069 864 aaPredicted RBP12.81□□□□□ -0.36
RPGR-208ENST00000482855 GPR161Q8N6U8 529 aaKnown RBP12.81□□□□□ -0.36
RPGR-208ENST00000482855 PARP3Q9Y6F1 533 aa12.81□□□□□ -0.36
RPGR-208ENST00000482855 KDRP35968 1356 aa12.81□□□□□ -0.36
RPGR-208ENST00000482855 NOP2P46087 812 aaKnown RBP12.8□□□□□ -0.36
RPGR-208ENST00000482855 LMAN1P49257 510 aa12.8□□□□□ -0.36
RPGR-208ENST00000482855 DPCR1Q3MIW9 517 aa12.8□□□□□ -0.36
RPGR-208ENST00000482855 ATL3Q6DD88 541 aa12.8□□□□□ -0.36
RPGR-208ENST00000482855 SRLQ86TD4 932 aa12.8□□□□□ -0.36
RPGR-208ENST00000482855 PSD3Q9NYI0 1048 aa12.8□□□□□ -0.36
RPGR-208ENST00000482855 MED23Q9ULK4 1368 aa12.8□□□□□ -0.36
RPGR-208ENST00000482855 NUTM2FA1L443 756 aa12.8□□□□□ -0.36
RPGR-208ENST00000482855 DHX16O60231 1041 aaKnown RBP12.8□□□□□ -0.36
RPGR-208ENST00000482855 PSME1Q06323 249 aa12.8□□□□□ -0.36
RPGR-208ENST00000482855 BEND3Q5T5X7 828 aa12.8□□□□□ -0.36
RPGR-208ENST00000482855 NUTM2GQ5VZR2 741 aa12.8□□□□□ -0.36
RPGR-208ENST00000482855 Q6ZUG5 572 aa12.8□□□□□ -0.36
RPGR-208ENST00000482855 REXO1L1PQ8IX06 675 aa12.8□□□□□ -0.36
RPGR-208ENST00000482855 GOLGA6L1Q8N7Z2 621 aa12.8□□□□□ -0.36
RPGR-208ENST00000482855 DNAAF4Q8WXU2 420 aa12.8□□□□□ -0.36
RPGR-208ENST00000482855 MRPS27Q92552 414 aaKnown RBP12.8□□□□□ -0.36
RPGR-208ENST00000482855 FMNL2Q96PY5 1086 aa12.8□□□□□ -0.36
RPGR-208ENST00000482855 EPC1Q9H2F5 836 aa12.8□□□□□ -0.36
RPGR-208ENST00000482855 RRP15Q9Y3B9 282 aaKnown RBP12.8□□□□□ -0.36
RPGR-208ENST00000482855 NEK1Q96PY6 1258 aa12.8□□□□□ -0.36
RPGR-208ENST00000482855 ZSCAN12O43309 604 aa12.79□□□□□ -0.36
RPGR-208ENST00000482855 MTX1Q13505 466 aa12.79□□□□□ -0.36
RPGR-208ENST00000482855 FMR1NBQ8N0W7 255 aaPredicted RBP12.79□□□□□ -0.36
RPGR-208ENST00000482855 SMARCC2Q8TAQ2 1214 aa12.79□□□□□ -0.36
RPGR-208ENST00000482855 LLPHQ9BRT6 129 aaKnown RBP12.79□□□□□ -0.36
RPGR-208ENST00000482855 KIAA1468Q9P260 1216 aa12.79□□□□□ -0.36
RPGR-208ENST00000482855 ADAM21Q9UKJ8 722 aa12.79□□□□□ -0.36
RPGR-208ENST00000482855 SCRN1Q12765 414 aa12.79□□□□□ -0.36
RPGR-208ENST00000482855 ZFP91Q96JP5 570 aaPredicted RBP12.79□□□□□ -0.36
RPGR-208ENST00000482855 YY1AP1Q9H869 796 aa12.79□□□□□ -0.36
RPGR-208ENST00000482855 PA2G4Q9UQ80 394 aaKnown RBP12.79□□□□□ -0.36
RPGR-208ENST00000482855 PI4KAP2A4QPH2 592 aa12.78□□□□□ -0.36
RPGR-208ENST00000482855 FANCGO15287 622 aa12.78□□□□□ -0.36
RPGR-208ENST00000482855 EIF2S2P20042 333 aaKnown RBP12.78□□□□□ -0.36
RPGR-208ENST00000482855 ACTN2P35609 894 aa12.78□□□□□ -0.36
RPGR-208ENST00000482855 NOM1Q5C9Z4 860 aaKnown RBP12.78□□□□□ -0.36
RPGR-208ENST00000482855 LEKR1Q6ZMV7 388 aa12.78□□□□□ -0.36
RPGR-208ENST00000482855 PI4KAP1Q8N8J0 262 aa12.78□□□□□ -0.36
RPGR-208ENST00000482855 MPHOSPH8Q99549 860 aa12.78□□□□□ -0.36
RPGR-208ENST00000482855 TMX1Q9H3N1 280 aa12.78□□□□□ -0.36
RPGR-208ENST00000482855 ATG3Q9NT62 314 aa12.78□□□□□ -0.36
RPGR-208ENST00000482855 BABAM1Q9NWV8 329 aa12.78□□□□□ -0.36
RPGR-208ENST00000482855 PRR36Q9H6K5 1346 aa12.78□□□□□ -0.36
RPGR-208ENST00000482855 GYS2P54840 703 aa12.78□□□□□ -0.36
RPGR-208ENST00000482855 FANCCQ00597 558 aa12.78□□□□□ -0.36
RPGR-208ENST00000482855 ZNF589Q86UQ0 364 aaPredicted RBP12.78□□□□□ -0.36
RPGR-208ENST00000482855 IQUBQ8NA54 791 aa12.78□□□□□ -0.36
RPGR-208ENST00000482855 EYA1Q99502 592 aa12.78□□□□□ -0.36
RPGR-208ENST00000482855 UTP14AQ9BVJ6 771 aaKnown RBP12.78□□□□□ -0.36
RPGR-208ENST00000482855 FUT8Q9BYC5 575 aa12.78□□□□□ -0.36
RPGR-208ENST00000482855 IGSF1Q8N6C5 1336 aa12.77□□□□□ -0.36
RPGR-208ENST00000482855 A0A1B0GVL5 298 aa12.77□□□□□ -0.36
RPGR-208ENST00000482855 GTF2A1P52655 376 aaPredicted RBP12.77□□□□□ -0.36
RPGR-208ENST00000482855 PPP2R3AQ06190 1150 aa12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms