RNA–Protein interactions for RNA: ENST00000482470.5

CALD1-220, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 3,941 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-220ENST00000482470 LEO1Q8WVC0 666 aaPredicted RBP10.68□□□□□ -0.7
CALD1-220ENST00000482470 A0A087WWV3 80 aa10.67□□□□□ -0.7
CALD1-220ENST00000482470 MAP3K12Q12852 859 aa10.67□□□□□ -0.7
CALD1-220ENST00000482470 KAZALD1Q96I82 304 aa10.67□□□□□ -0.7
CALD1-220ENST00000482470 TEX13AQ9BXU3 409 aaPredicted RBP10.67□□□□□ -0.7
CALD1-220ENST00000482470 FTOQ9C0B1 505 aaKnown RBP eCLIP10.67□□□□□ -0.72e-6■■□□□ 12.1
CALD1-220ENST00000482470 TRMT1Q9NXH9 659 aaKnown RBP10.67□□□□□ -0.7
CALD1-220ENST00000482470 NOLC1Q14978 699 aaKnown RBP eCLIP10.67□□□□□ -0.7
CALD1-220ENST00000482470 UVSSAQ2YD98 709 aa10.67□□□□□ -0.7
CALD1-220ENST00000482470 HSP90AA4PQ58FG1 418 aa10.67□□□□□ -0.7
CALD1-220ENST00000482470 TMEM67Q5HYA8 995 aa10.67□□□□□ -0.7
CALD1-220ENST00000482470 TTC14Q96N46 770 aa10.67□□□□□ -0.7
CALD1-220ENST00000482470 HAUS7Q99871 368 aa10.67□□□□□ -0.7
CALD1-220ENST00000482470 ZKSCAN3Q9BRR0 538 aa10.67□□□□□ -0.7
CALD1-220ENST00000482470 UBAC1Q9BSL1 405 aa10.67□□□□□ -0.7
CALD1-220ENST00000482470 ZSCAN16Q9H4T2 348 aaPredicted RBP10.67□□□□□ -0.7
CALD1-220ENST00000482470 CEMIPQ8WUJ3 1361 aa10.67□□□□□ -0.7
CALD1-220ENST00000482470 SALL3Q9BXA9 1300 aa10.67□□□□□ -0.7
CALD1-220ENST00000482470 A0A1B0GVL5 298 aa10.67□□□□□ -0.7
CALD1-220ENST00000482470 E7EWF7 191 aa10.67□□□□□ -0.7
CALD1-220ENST00000482470 RAD21O60216 631 aa10.67□□□□□ -0.7
CALD1-220ENST00000482470 HSPD1P10809 573 aaKnown RBP10.67□□□□□ -0.7
CALD1-220ENST00000482470 ATP6V1AP38606 617 aa10.67□□□□□ -0.7
CALD1-220ENST00000482470 METAP2P50579 478 aaKnown RBP eCLIP10.67□□□□□ -0.7
CALD1-220ENST00000482470 TRIM22Q8IYM9 498 aa10.67□□□□□ -0.7
CALD1-220ENST00000482470 CCAR2Q8N163 923 aaKnown RBP10.67□□□□□ -0.7
CALD1-220ENST00000482470 GPHNQ9NQX3 736 aaPredicted RBP10.67□□□□□ -0.7
CALD1-220ENST00000482470 ADGRL3Q9HAR2 1447 aa10.67□□□□□ -0.7
CALD1-220ENST00000482470 GOLGA8AA7E2F4 631 aa10.66□□□□□ -0.7
CALD1-220ENST00000482470 EPB41L2O43491 1005 aaKnown RBP10.66□□□□□ -0.7
CALD1-220ENST00000482470 TCIRG1Q13488 830 aa10.66□□□□□ -0.7
CALD1-220ENST00000482470 MYL10Q9BUA6 226 aa10.66□□□□□ -0.7
CALD1-220ENST00000482470 VGLL3A8MV65 326 aa10.66□□□□□ -0.7
CALD1-220ENST00000482470 GPAA1O43292 621 aa10.66□□□□□ -0.7
CALD1-220ENST00000482470 OFD1O75665 1012 aa10.66□□□□□ -0.7
CALD1-220ENST00000482470 SERPINC1P01008 464 aa10.66□□□□□ -0.7
CALD1-220ENST00000482470 SLC5A1P13866 664 aa10.66□□□□□ -0.7
CALD1-220ENST00000482470 PTGS1P23219 599 aa10.66□□□□□ -0.7
CALD1-220ENST00000482470 PDIA6Q15084 440 aa10.66□□□□□ -0.7
CALD1-220ENST00000482470 CCDC34Q96HJ3 373 aa10.66□□□□□ -0.7
CALD1-220ENST00000482470 SLC26A6Q9BXS9 759 aa10.66□□□□□ -0.7
CALD1-220ENST00000482470 SLC12A7Q9Y666 1083 aa10.66□□□□□ -0.7
CALD1-220ENST00000482470 NCOA3Q9Y6Q9 1424 aa10.66□□□□□ -0.7
CALD1-220ENST00000482470 NBPF26B4DH59 902 aa10.66□□□□□ -0.7
CALD1-220ENST00000482470 NBPF14Q5TI25 921 aa10.66□□□□□ -0.7
CALD1-220ENST00000482470 NBPF10Q6P3W6 841 aaKnown RBP10.66□□□□□ -0.7
CALD1-220ENST00000482470 FAM177A1Q8N128 213 aaPredicted RBP10.66□□□□□ -0.7
CALD1-220ENST00000482470 NBPF15Q8N660 670 aa10.66□□□□□ -0.7
CALD1-220ENST00000482470 GTF3C6Q969F1 213 aa10.66□□□□□ -0.7
CALD1-220ENST00000482470 HELLSQ9NRZ9 838 aa10.66□□□□□ -0.7
CALD1-220ENST00000482470 B4E1Z4 1266 aa10.65□□□□□ -0.7
CALD1-220ENST00000482470 SNAP23O00161 211 aa10.65□□□□□ -0.7
CALD1-220ENST00000482470 RANBP6O60518 1105 aaKnown RBP10.65□□□□□ -0.7
CALD1-220ENST00000482470 NR1I2O75469 434 aa10.65□□□□□ -0.7
CALD1-220ENST00000482470 TPM3P06753 285 aa10.65□□□□□ -0.7
CALD1-220ENST00000482470 OLFM4Q6UX06 510 aa10.65□□□□□ -0.7
CALD1-220ENST00000482470 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.65□□□□□ -0.72e-7■■■□□ 15.9
CALD1-220ENST00000482470 JAG2Q9Y219 1238 aa10.65□□□□□ -0.7
CALD1-220ENST00000482470 IARSP41252 1262 aaKnown RBP10.65□□□□□ -0.7
CALD1-220ENST00000482470 SCRN1Q12765 414 aa10.65□□□□□ -0.7
CALD1-220ENST00000482470 CLEC17AQ6ZS10 378 aa10.65□□□□□ -0.7
CALD1-220ENST00000482470 CCDC24Q8N4L8 307 aa10.65□□□□□ -0.7
CALD1-220ENST00000482470 ALG1Q9BT22 464 aa10.65□□□□□ -0.7
CALD1-220ENST00000482470 NIP7Q9Y221 180 aaKnown RBP eCLIP10.65□□□□□ -0.7
CALD1-220ENST00000482470 ZFYP08048 801 aaPredicted RBP10.65□□□□□ -0.7
CALD1-220ENST00000482470 MAGEB6Q8N7X4 407 aa10.65□□□□□ -0.7
CALD1-220ENST00000482470 TSC1Q92574 1164 aa10.65□□□□□ -0.7
CALD1-220ENST00000482470 ANO10Q9NW15 660 aa10.65□□□□□ -0.7
CALD1-220ENST00000482470 CDKL5O76039 1030 aa10.65□□□□□ -0.71
CALD1-220ENST00000482470 JMYQ8N9B5 988 aa10.65□□□□□ -0.71
CALD1-220ENST00000482470 GNL3LQ9NVN8 582 aaKnown RBP10.65□□□□□ -0.71
CALD1-220ENST00000482470 ITSN1Q15811 1721 aa10.64□□□□□ -0.71
CALD1-220ENST00000482470 ERVV-2B6SEH9 535 aa10.64□□□□□ -0.71
CALD1-220ENST00000482470 GREM2Q9H772 168 aa10.64□□□□□ -0.71
CALD1-220ENST00000482470 FGAP02671 866 aa10.64□□□□□ -0.71
CALD1-220ENST00000482470 SLC3A2P08195 630 aaKnown RBP10.64□□□□□ -0.71
CALD1-220ENST00000482470 BRINP3Q76B58 766 aa10.64□□□□□ -0.71
CALD1-220ENST00000482470 PHKBQ93100 1093 aa10.64□□□□□ -0.71
CALD1-220ENST00000482470 OSBP2Q969R2 916 aa10.64□□□□□ -0.71
CALD1-220ENST00000482470 USP28Q96RU2 1077 aa10.64□□□□□ -0.71
CALD1-220ENST00000482470 ZBTB43O43298 467 aa10.63□□□□□ -0.71
CALD1-220ENST00000482470 TOB2Q14106 344 aaPredicted RBP10.63□□□□□ -0.71
CALD1-220ENST00000482470 AOPEPQ8N6M6 819 aa10.63□□□□□ -0.71
CALD1-220ENST00000482470 TTF1Q15361 905 aaPredicted RBP10.63□□□□□ -0.71
CALD1-220ENST00000482470 HS1BP3Q53T59 392 aa10.63□□□□□ -0.71
CALD1-220ENST00000482470 MFSD6Q6ZSS7 791 aa10.63□□□□□ -0.71
CALD1-220ENST00000482470 APPBP2Q92624 585 aa10.63□□□□□ -0.71
CALD1-220ENST00000482470 CBX8Q9HC52 389 aa10.63□□□□□ -0.71
CALD1-220ENST00000482470 GJB4Q9NTQ9 266 aa10.63□□□□□ -0.71
CALD1-220ENST00000482470 ZBTB1Q9Y2K1 713 aa10.63□□□□□ -0.71
CALD1-220ENST00000482470 SLC4A4Q9Y6R1 1079 aa10.63□□□□□ -0.71
CALD1-220ENST00000482470 MBD4O95243 580 aa10.63□□□□□ -0.71
CALD1-220ENST00000482470 DDB1Q16531 1140 aa10.63□□□□□ -0.71
CALD1-220ENST00000482470 CFAP100Q494V2 611 aa10.63□□□□□ -0.71
CALD1-220ENST00000482470 MRPS27Q92552 414 aaKnown RBP10.63□□□□□ -0.71
CALD1-220ENST00000482470 G3V3G9 751 aa10.62□□□□□ -0.71
CALD1-220ENST00000482470 XBP1P17861 261 aa10.62□□□□□ -0.71
CALD1-220ENST00000482470 CYP7A1P22680 504 aa10.62□□□□□ -0.71
CALD1-220ENST00000482470 KCNQ4P56696 695 aa10.62□□□□□ -0.71
CALD1-220ENST00000482470 STX1AQ16623 288 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms