RNA–Protein interactions for RNA: ENST00000482143.5

TSPAN1-207, Transcript of tetraspanin 1, humanhuman

TSL 5

Gene TSPAN1, Length 827 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-207ENST00000482143 CCDC152Q4G0S7 254 aa16.69■□□□□ 0.26
TSPAN1-207ENST00000482143 OTOP1Q7RTM1 612 aa16.69■□□□□ 0.26
TSPAN1-207ENST00000482143 PODNQ7Z5L7 613 aa16.69■□□□□ 0.26
TSPAN1-207ENST00000482143 GMLQ99445 158 aa16.69■□□□□ 0.26
TSPAN1-207ENST00000482143 MANSC4A6NHS7 340 aaPredicted RBP16.68■□□□□ 0.26
TSPAN1-207ENST00000482143 ERO1AQ96HE7 468 aa16.68■□□□□ 0.26
TSPAN1-207ENST00000482143 CCDC85AQ96PX6 553 aaPredicted RBP16.68■□□□□ 0.26
TSPAN1-207ENST00000482143 ANGEL1Q9UNK9 670 aaKnown RBP16.68■□□□□ 0.26
TSPAN1-207ENST00000482143 WNT10BO00744 389 aa16.67■□□□□ 0.26
TSPAN1-207ENST00000482143 SASH1O94885 1247 aa16.67■□□□□ 0.26
TSPAN1-207ENST00000482143 ATP2B4P23634 1241 aa16.67■□□□□ 0.26
TSPAN1-207ENST00000482143 INHBEP58166 350 aa16.67■□□□□ 0.26
TSPAN1-207ENST00000482143 DUSP27Q5VZP5 1158 aa16.67■□□□□ 0.26
TSPAN1-207ENST00000482143 SPRYD7Q5W111 196 aa16.67■□□□□ 0.26
TSPAN1-207ENST00000482143 RIC3Q7Z5B4 369 aa16.67■□□□□ 0.26
TSPAN1-207ENST00000482143 APOBEC3FQ8IUX4 373 aaKnown RBP16.67■□□□□ 0.26
TSPAN1-207ENST00000482143 ANKRD18AQ8IVF6 992 aa16.67■□□□□ 0.26
TSPAN1-207ENST00000482143 MBIPQ9NS73 344 aa16.67■□□□□ 0.26
TSPAN1-207ENST00000482143 HYPKQ9NX55 129 aa16.67■□□□□ 0.26
TSPAN1-207ENST00000482143 MYO3BQ8WXR4 1341 aa16.67■□□□□ 0.26
TSPAN1-207ENST00000482143 LAMB1P07942 1786 aa16.66■□□□□ 0.26
TSPAN1-207ENST00000482143 ECM29Q5VYK3 1845 aa16.66■□□□□ 0.26
TSPAN1-207ENST00000482143 WDR43Q15061 677 aaKnown RBP eCLIP16.66■□□□□ 0.26
TSPAN1-207ENST00000482143 ZBTB38Q8NAP3 1195 aaPredicted RBP16.66■□□□□ 0.26
TSPAN1-207ENST00000482143 SLC10A4Q96EP9 437 aa16.66■□□□□ 0.26
TSPAN1-207ENST00000482143 TMEM106CQ9BVX2 250 aa16.66■□□□□ 0.26
TSPAN1-207ENST00000482143 KIAA0100Q14667 2235 aaKnown RBP16.65■□□□□ 0.26
TSPAN1-207ENST00000482143 EN2P19622 333 aaPredicted RBP16.65■□□□□ 0.26
TSPAN1-207ENST00000482143 GOLGA2Q08379 1002 aa16.65■□□□□ 0.26
TSPAN1-207ENST00000482143 IFNL1Q8IU54 200 aa16.65■□□□□ 0.26
TSPAN1-207ENST00000482143 MXD3Q9BW11 206 aa16.65■□□□□ 0.26
TSPAN1-207ENST00000482143 PRKRIP1Q9H875 184 aaPredicted RBP16.65■□□□□ 0.26
TSPAN1-207ENST00000482143 PTPN22Q9Y2R2 807 aa16.65■□□□□ 0.26
TSPAN1-207ENST00000482143 OTUD7BQ6GQQ9 843 aa16.64■□□□□ 0.25
TSPAN1-207ENST00000482143 CD99L2Q8TCZ2 262 aa16.64■□□□□ 0.25
TSPAN1-207ENST00000482143 EFCC1Q9HA90 598 aa16.64■□□□□ 0.25
TSPAN1-207ENST00000482143 MKI67P46013 3256 aaKnown RBP16.64■□□□□ 0.25
TSPAN1-207ENST00000482143 CACNA1FO60840 1977 aa16.64■□□□□ 0.25
TSPAN1-207ENST00000482143 MED23Q9ULK4 1368 aa16.64■□□□□ 0.25
TSPAN1-207ENST00000482143 PDE8AO60658 829 aa16.63■□□□□ 0.25
TSPAN1-207ENST00000482143 DACT2Q5SW24 774 aa16.63■□□□□ 0.25
TSPAN1-207ENST00000482143 IFT57Q9NWB7 429 aa16.63■□□□□ 0.25
TSPAN1-207ENST00000482143 FZD1Q9UP38 647 aa16.63■□□□□ 0.25
TSPAN1-207ENST00000482143 COLQQ9Y215 455 aaPredicted RBP16.63■□□□□ 0.25
TSPAN1-207ENST00000482143 CENPFP49454 3210 aa16.63■□□□□ 0.25
TSPAN1-207ENST00000482143 COL1A1P02452 1464 aaPredicted RBP16.62■□□□□ 0.25
TSPAN1-207ENST00000482143 ZBTB48P10074 688 aaPredicted RBP16.62■□□□□ 0.25
TSPAN1-207ENST00000482143 LDLRAD1Q5T700 205 aa16.62■□□□□ 0.25
TSPAN1-207ENST00000482143 CDC5LQ99459 802 aaKnown RBP16.62■□□□□ 0.25
TSPAN1-207ENST00000482143 MYD88Q99836 296 aa16.62■□□□□ 0.25
TSPAN1-207ENST00000482143 PHAXQ9H814 394 aaKnown RBP16.62■□□□□ 0.25
TSPAN1-207ENST00000482143 PPP1R12BO60237 982 aaPredicted RBP16.61■□□□□ 0.25
TSPAN1-207ENST00000482143 STRIP1Q5VSL9 837 aa16.61■□□□□ 0.25
TSPAN1-207ENST00000482143 KIAA0825Q8IV33 1275 aa16.61■□□□□ 0.25
TSPAN1-207ENST00000482143 HTTP42858 3142 aa16.61■□□□□ 0.25
TSPAN1-207ENST00000482143 IGF2BP3O00425 579 aaKnown RBP eCLIP16.6■□□□□ 0.25
TSPAN1-207ENST00000482143 MMP14P50281 582 aa16.6■□□□□ 0.25
TSPAN1-207ENST00000482143 CRHR2Q13324 411 aa16.6■□□□□ 0.25
TSPAN1-207ENST00000482143 SLC4A8Q2Y0W8 1093 aa16.6■□□□□ 0.25
TSPAN1-207ENST00000482143 NBPF11Q86T75 865 aa16.6■□□□□ 0.25
TSPAN1-207ENST00000482143 JARID2Q92833 1246 aaPredicted RBP16.6■□□□□ 0.25
TSPAN1-207ENST00000482143 ARMC5Q96C12 935 aa16.6■□□□□ 0.25
TSPAN1-207ENST00000482143 WNK4Q96J92 1243 aa16.6■□□□□ 0.25
TSPAN1-207ENST00000482143 COA1Q9GZY4 146 aa16.6■□□□□ 0.25
TSPAN1-207ENST00000482143 CWC25Q9NXE8 425 aaPredicted RBP16.6■□□□□ 0.25
TSPAN1-207ENST00000482143 APAF1O14727 1248 aa16.59■□□□□ 0.25
TSPAN1-207ENST00000482143 PCCAP05165 728 aaPredicted RBP16.59■□□□□ 0.25
TSPAN1-207ENST00000482143 GNAI1P63096 354 aa16.59■□□□□ 0.25
TSPAN1-207ENST00000482143 SP3Q02447 781 aa16.59■□□□□ 0.25
TSPAN1-207ENST00000482143 ARHGEF6Q15052 776 aa16.59■□□□□ 0.25
TSPAN1-207ENST00000482143 SLC9C1Q4G0N8 1177 aa16.59■□□□□ 0.25
TSPAN1-207ENST00000482143 CCDC191Q8NCU4 936 aa16.59■□□□□ 0.25
TSPAN1-207ENST00000482143 DEFB129Q9H1M3 183 aa16.59■□□□□ 0.25
TSPAN1-207ENST00000482143 CCT4P50991 539 aaKnown RBP16.58■□□□□ 0.24
TSPAN1-207ENST00000482143 TTLL5Q6EMB2 1281 aa16.58■□□□□ 0.24
TSPAN1-207ENST00000482143 C8orf58Q8NAV2 365 aa16.58■□□□□ 0.24
TSPAN1-207ENST00000482143 CLMNQ96JQ2 1002 aa16.58■□□□□ 0.24
TSPAN1-207ENST00000482143 OTOFQ9HC10 1997 aa16.57■□□□□ 0.24
TSPAN1-207ENST00000482143 WTIPA6NIX2 430 aaPredicted RBP16.57■□□□□ 0.24
TSPAN1-207ENST00000482143 MYCP01106 439 aaPredicted RBP16.57■□□□□ 0.24
TSPAN1-207ENST00000482143 DLGAP5Q15398 846 aa16.57■□□□□ 0.24
TSPAN1-207ENST00000482143 BRCA2P51587 3418 aa16.56■□□□□ 0.24
TSPAN1-207ENST00000482143 MYO1BO43795 1136 aa16.56■□□□□ 0.24
TSPAN1-207ENST00000482143 IREB2P48200 963 aaKnown RBP16.56■□□□□ 0.24
TSPAN1-207ENST00000482143 CTSWP56202 376 aa16.56■□□□□ 0.24
TSPAN1-207ENST00000482143 GTF2IP78347 998 aa16.56■□□□□ 0.24
TSPAN1-207ENST00000482143 CALD1Q05682 793 aaKnown RBP16.56■□□□□ 0.24
TSPAN1-207ENST00000482143 SUPT20HL1Q3ZLR7 823 aa16.56■□□□□ 0.24
TSPAN1-207ENST00000482143 METTL22Q9BUU2 404 aaPredicted RBP16.56■□□□□ 0.24
TSPAN1-207ENST00000482143 MINPP1Q9UNW1 487 aa16.56■□□□□ 0.24
TSPAN1-207ENST00000482143 A0A1B0GUL6 1792 aa16.56■□□□□ 0.24
TSPAN1-207ENST00000482143 H0YGN5 161 aa16.55■□□□□ 0.24
TSPAN1-207ENST00000482143 ELL2O00472 640 aaPredicted RBP16.55■□□□□ 0.24
TSPAN1-207ENST00000482143 KCNJ4P48050 445 aa16.55■□□□□ 0.24
TSPAN1-207ENST00000482143 MAP3K11Q16584 847 aa16.55■□□□□ 0.24
TSPAN1-207ENST00000482143 ZNF333Q96JL9 665 aa16.55■□□□□ 0.24
TSPAN1-207ENST00000482143 BSDC1Q9NW68 430 aaPredicted RBP16.55■□□□□ 0.24
TSPAN1-207ENST00000482143 PPP2R3BQ9Y5P8 575 aa16.55■□□□□ 0.24
TSPAN1-207ENST00000482143 UNCXA6NJT0 531 aa16.54■□□□□ 0.24
TSPAN1-207ENST00000482143 DDX58O95786 925 aaKnown RBP16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms