RNA–Protein interactions for RNA: ENST00000481738.1

LINC00544-202, long intergenic non-protein coding RNA 544, humanhuman

TSL 3 BASIC

Gene LINC00544, Length 575 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00544-202ENST00000481738 COA1Q9GZY4 146 aa11.32□□□□□ -0.6
LINC00544-202ENST00000481738 PSME4Q14997 1843 aa11.32□□□□□ -0.6
LINC00544-202ENST00000481738 KIF16BQ96L93 1317 aa11.32□□□□□ -0.6
LINC00544-202ENST00000481738 TMEM88BA6NKF7 163 aa11.31□□□□□ -0.6
LINC00544-202ENST00000481738 TRAF5O00463 557 aa11.31□□□□□ -0.6
LINC00544-202ENST00000481738 RABL6Q3YEC7 729 aaPredicted RBP11.31□□□□□ -0.6
LINC00544-202ENST00000481738 POTEDQ86YR6 584 aa11.31□□□□□ -0.6
LINC00544-202ENST00000481738 PUS3Q9BZE2 481 aaKnown RBP11.31□□□□□ -0.6
LINC00544-202ENST00000481738 MKRN1Q9UHC7 482 aaKnown RBP11.31□□□□□ -0.6
LINC00544-202ENST00000481738 EGFRP00533 1210 aa11.3□□□□□ -0.6
LINC00544-202ENST00000481738 KIF4BQ2VIQ3 1234 aa11.3□□□□□ -0.6
LINC00544-202ENST00000481738 AGBL3Q8NEM8 1001 aa11.3□□□□□ -0.6
LINC00544-202ENST00000481738 ZC3H15Q8WU90 426 aaKnown RBP11.3□□□□□ -0.6
LINC00544-202ENST00000481738 MXD3Q9BW11 206 aa11.3□□□□□ -0.6
LINC00544-202ENST00000481738 GLIS2Q9BZE0 524 aaPredicted RBP11.3□□□□□ -0.6
LINC00544-202ENST00000481738 PGAP2Q9UHJ9 254 aa11.3□□□□□ -0.6
LINC00544-202ENST00000481738 ZNF609O15014 1411 aa11.29□□□□□ -0.6
LINC00544-202ENST00000481738 BCAR3O75815 825 aa11.29□□□□□ -0.6
LINC00544-202ENST00000481738 UBTFL1P0CB47 393 aaPredicted RBP11.29□□□□□ -0.6
LINC00544-202ENST00000481738 STRIP1Q5VSL9 837 aa11.29□□□□□ -0.6
LINC00544-202ENST00000481738 C15orf52Q6ZUT6 534 aaKnown RBP11.29□□□□□ -0.6
LINC00544-202ENST00000481738 JMYQ8N9B5 988 aa11.29□□□□□ -0.6
LINC00544-202ENST00000481738 ARHGAP45Q92619 1136 aa11.29□□□□□ -0.6
LINC00544-202ENST00000481738 FRAT1Q92837 279 aaPredicted RBP11.29□□□□□ -0.6
LINC00544-202ENST00000481738 GMLQ99445 158 aa11.29□□□□□ -0.6
LINC00544-202ENST00000481738 CD209Q9NNX6 404 aa11.29□□□□□ -0.6
LINC00544-202ENST00000481738 IRS2Q9Y4H2 1338 aa11.29□□□□□ -0.6
LINC00544-202ENST00000481738 IPO8O15397 1037 aaKnown RBP11.28□□□□□ -0.6
LINC00544-202ENST00000481738 USP17L8P0C7I0 530 aa11.28□□□□□ -0.6
LINC00544-202ENST00000481738 GTF2IP78347 998 aa11.28□□□□□ -0.6
LINC00544-202ENST00000481738 LRRC24Q50LG9 513 aa11.28□□□□□ -0.6
LINC00544-202ENST00000481738 DACT2Q5SW24 774 aa11.28□□□□□ -0.6
LINC00544-202ENST00000481738 TTLL5Q6EMB2 1281 aa11.28□□□□□ -0.6
LINC00544-202ENST00000481738 CDC37L1Q7L3B6 337 aa11.28□□□□□ -0.6
LINC00544-202ENST00000481738 ZNF804AQ7Z570 1209 aa11.28□□□□□ -0.6
LINC00544-202ENST00000481738 KLHDC4Q8TBB5 520 aa11.28□□□□□ -0.6
LINC00544-202ENST00000481738 ABT1Q9ULW3 272 aaKnown RBP11.28□□□□□ -0.6
LINC00544-202ENST00000481738 TNNQ9UQP3 1299 aa11.28□□□□□ -0.6
LINC00544-202ENST00000481738 RIPOR2Q9Y4F9 1068 aa11.28□□□□□ -0.6
LINC00544-202ENST00000481738 ZBED9Q6R2W3 1325 aa11.28□□□□□ -0.6
LINC00544-202ENST00000481738 MROH5Q6ZUA9 1318 aa11.28□□□□□ -0.6
LINC00544-202ENST00000481738 ZNF646O15015 1829 aaPredicted RBP11.28□□□□□ -0.6
LINC00544-202ENST00000481738 CNTNAP1P78357 1384 aa11.28□□□□□ -0.6
LINC00544-202ENST00000481738 TRPM7Q96QT4 1865 aa11.27□□□□□ -0.6
LINC00544-202ENST00000481738 TRIM27P14373 513 aa11.27□□□□□ -0.61
LINC00544-202ENST00000481738 ZNF280AP59817 542 aaPredicted RBP11.27□□□□□ -0.61
LINC00544-202ENST00000481738 UBE4AQ14139 1066 aa11.27□□□□□ -0.61
LINC00544-202ENST00000481738 USP48Q86UV5 1035 aa11.27□□□□□ -0.61
LINC00544-202ENST00000481738 DCPSQ96C86 337 aaKnown RBP11.27□□□□□ -0.61
LINC00544-202ENST00000481738 MEIS3Q99687 375 aa11.27□□□□□ -0.61
LINC00544-202ENST00000481738 ZNF408Q9H9D4 720 aa11.27□□□□□ -0.61
LINC00544-202ENST00000481738 MYOZ2Q9NPC6 264 aa11.27□□□□□ -0.61
LINC00544-202ENST00000481738 LRRFIP2Q9Y608 721 aaKnown RBP11.27□□□□□ -0.61
LINC00544-202ENST00000481738 ASTN2O75129 1339 aaPredicted RBP11.27□□□□□ -0.61
LINC00544-202ENST00000481738 MYO3BQ8WXR4 1341 aa11.27□□□□□ -0.61
LINC00544-202ENST00000481738 CELF2O95319 508 aaKnown RBP11.26□□□□□ -0.61
LINC00544-202ENST00000481738 RFX5P48382 616 aaPredicted RBP11.26□□□□□ -0.61
LINC00544-202ENST00000481738 DEFB115Q30KQ5 88 aa11.26□□□□□ -0.61
LINC00544-202ENST00000481738 METTL24Q5JXM2 366 aa11.26□□□□□ -0.61
LINC00544-202ENST00000481738 CST9Q5W186 159 aa11.26□□□□□ -0.61
LINC00544-202ENST00000481738 INTS3Q68E01 1043 aaKnown RBP11.26□□□□□ -0.61
LINC00544-202ENST00000481738 DLK2Q6UY11 383 aa11.26□□□□□ -0.61
LINC00544-202ENST00000481738 ATF7IPQ6VMQ6 1270 aa11.26□□□□□ -0.61
LINC00544-202ENST00000481738 KRT26Q7Z3Y9 468 aa11.26□□□□□ -0.61
LINC00544-202ENST00000481738 CLUAP1Q96AJ1 413 aa11.26□□□□□ -0.61
LINC00544-202ENST00000481738 GGA3Q9NZ52 723 aa11.26□□□□□ -0.61
LINC00544-202ENST00000481738 HDAC5Q9UQL6 1122 aa11.26□□□□□ -0.61
LINC00544-202ENST00000481738 POLR2AP24928 1970 aaKnown RBP11.25□□□□□ -0.61
LINC00544-202ENST00000481738 RASSF10A6NK89 507 aa11.25□□□□□ -0.61
LINC00544-202ENST00000481738 ADM5C9JUS6 153 aa11.25□□□□□ -0.61
LINC00544-202ENST00000481738 IL1R1P14778 569 aa11.25□□□□□ -0.61
LINC00544-202ENST00000481738 GYG1P46976 350 aa11.25□□□□□ -0.61
LINC00544-202ENST00000481738 VEGFBP49765 207 aa11.25□□□□□ -0.61
LINC00544-202ENST00000481738 PTPN12Q05209 780 aaKnown RBP11.25□□□□□ -0.61
LINC00544-202ENST00000481738 SCARF1Q14162 830 aa11.25□□□□□ -0.61
LINC00544-202ENST00000481738 ANGEL2Q5VTE6 544 aaKnown RBP11.25□□□□□ -0.61
LINC00544-202ENST00000481738 ZKSCAN2Q63HK3 967 aa11.25□□□□□ -0.61
LINC00544-202ENST00000481738 KIAA0825Q8IV33 1275 aa11.25□□□□□ -0.61
LINC00544-202ENST00000481738 OGFOD1Q8N543 542 aa11.25□□□□□ -0.61
LINC00544-202ENST00000481738 JAG2Q9Y219 1238 aa11.25□□□□□ -0.61
LINC00544-202ENST00000481738 EYA2O00167 538 aa11.24□□□□□ -0.61
LINC00544-202ENST00000481738 PDE8BO95263 885 aa11.24□□□□□ -0.61
LINC00544-202ENST00000481738 GNAI3P08754 354 aa11.24□□□□□ -0.61
LINC00544-202ENST00000481738 HIBADHP31937 336 aaKnown RBP11.24□□□□□ -0.61
LINC00544-202ENST00000481738 PAXIP1Q6ZW49 1069 aaPredicted RBP11.24□□□□□ -0.61
LINC00544-202ENST00000481738 SULF1Q8IWU6 871 aa11.24□□□□□ -0.61
LINC00544-202ENST00000481738 CERS5Q8N5B7 392 aa11.24□□□□□ -0.61
LINC00544-202ENST00000481738 VGLL2Q8N8G2 317 aa11.24□□□□□ -0.61
LINC00544-202ENST00000481738 FAM84BQ96KN1 310 aaPredicted RBP11.24□□□□□ -0.61
LINC00544-202ENST00000481738 HDAC9Q9UKV0 1011 aa11.24□□□□□ -0.61
LINC00544-202ENST00000481738 TLL2Q9Y6L7 1015 aa11.24□□□□□ -0.61
LINC00544-202ENST00000481738 HSPA1AP0DMV8 641 aaKnown RBP11.23□□□□□ -0.61
LINC00544-202ENST00000481738 HSPA1BP0DMV9 641 aaKnown RBP11.23□□□□□ -0.61
LINC00544-202ENST00000481738 NBPF9Q3BBW0 867 aa11.23□□□□□ -0.61
LINC00544-202ENST00000481738 TDRD7Q8NHU6 1098 aaKnown RBP11.23□□□□□ -0.61
LINC00544-202ENST00000481738 SIL1Q9H173 461 aa11.23□□□□□ -0.61
LINC00544-202ENST00000481738 F8W031 263 aaPredicted RBP11.22□□□□□ -0.61
LINC00544-202ENST00000481738 WNT10BO00744 389 aa11.22□□□□□ -0.61
LINC00544-202ENST00000481738 SASH1O94885 1247 aa11.22□□□□□ -0.61
LINC00544-202ENST00000481738 GRM1Q13255 1194 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms