RNA–Protein interactions for RNA: ENST00000481453.5

MRPL28-209, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 2

Gene MRPL28, Length 2,229 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-209ENST00000481453 LIMCH1Q9UPQ0 1083 aa21.96■■□□□ 1.11
MRPL28-209ENST00000481453 RNF113AO15541 343 aaKnown RBP21.96■■□□□ 1.11
MRPL28-209ENST00000481453 FKBP4Q02790 459 aaKnown RBP eCLIP21.96■■□□□ 1.11
MRPL28-209ENST00000481453 RNF20Q5VTR2 975 aa21.96■■□□□ 1.11
MRPL28-209ENST00000481453 LARP6Q9BRS8 491 aaKnown RBP21.96■■□□□ 1.11
MRPL28-209ENST00000481453 SEC31BQ9NQW1 1179 aa21.96■■□□□ 1.11
MRPL28-209ENST00000481453 HMG20BQ9P0W2 317 aa21.96■■□□□ 1.11
MRPL28-209ENST00000481453 COL4A1P02462 1669 aa21.96■■□□□ 1.11
MRPL28-209ENST00000481453 RC3H1Q5TC82 1133 aaKnown RBP21.95■■□□□ 1.1
MRPL28-209ENST00000481453 RBSNQ9H1K0 784 aa21.95■■□□□ 1.1
MRPL28-209ENST00000481453 ONECUT3O60422 494 aaPredicted RBP21.95■■□□□ 1.1
MRPL28-209ENST00000481453 LARGE1O95461 756 aa21.95■■□□□ 1.1
MRPL28-209ENST00000481453 MBD3O95983 291 aa21.95■■□□□ 1.1
MRPL28-209ENST00000481453 PI16Q6UXB8 463 aa21.95■■□□□ 1.1
MRPL28-209ENST00000481453 BCL2L12Q9HB09 334 aa21.95■■□□□ 1.1
MRPL28-209ENST00000481453 TMEM63CQ9P1W3 806 aa21.95■■□□□ 1.1
MRPL28-209ENST00000481453 FGFR2P21802 821 aa21.94■■□□□ 1.1
MRPL28-209ENST00000481453 ZAP70P43403 619 aa21.94■■□□□ 1.1
MRPL28-209ENST00000481453 U3KPZ7 1027 aaPredicted RBP21.94■■□□□ 1.1
MRPL28-209ENST00000481453 MAST3O60307 1309 aa21.94■■□□□ 1.1
MRPL28-209ENST00000481453 MROH5Q6ZUA9 1318 aa21.94■■□□□ 1.1
MRPL28-209ENST00000481453 TAF1LQ8IZX4 1826 aa21.94■■□□□ 1.1
MRPL28-209ENST00000481453 MCAMP43121 646 aa21.94■■□□□ 1.1
MRPL28-209ENST00000481453 ZNF512BQ96KM6 892 aaPredicted RBP21.94■■□□□ 1.1
MRPL28-209ENST00000481453 NSFL1CQ9UNZ2 370 aaKnown RBP21.94■■□□□ 1.1
MRPL28-209ENST00000481453 CASZ1Q86V15 1759 aa21.94■■□□□ 1.1
MRPL28-209ENST00000481453 RGL2O15211 777 aa21.93■■□□□ 1.1
MRPL28-209ENST00000481453 PSMA5P28066 241 aa21.93■■□□□ 1.1
MRPL28-209ENST00000481453 CCDC152Q4G0S7 254 aa21.93■■□□□ 1.1
MRPL28-209ENST00000481453 M0R2C6 588 aa21.92■■□□□ 1.1
MRPL28-209ENST00000481453 RPS6KA4O75676 772 aa21.92■■□□□ 1.1
MRPL28-209ENST00000481453 MYH7P12883 1935 aa21.92■■□□□ 1.1
MRPL28-209ENST00000481453 PUM3Q15397 648 aaKnown RBP21.92■■□□□ 1.1
MRPL28-209ENST00000481453 HELBQ8NG08 1087 aaPredicted RBP21.92■■□□□ 1.1
MRPL28-209ENST00000481453 LRSAM1Q6UWE0 723 aa21.91■■□□□ 1.1
MRPL28-209ENST00000481453 CCNL1Q9UK58 526 aaPredicted RBP21.91■■□□□ 1.1
MRPL28-209ENST00000481453 COL24A1Q17RW2 1714 aa21.91■■□□□ 1.1
MRPL28-209ENST00000481453 SYCE3A1L190 88 aa21.91■■□□□ 1.1
MRPL28-209ENST00000481453 RPS6KB1P23443 525 aa21.91■■□□□ 1.1
MRPL28-209ENST00000481453 ERFEQ4G0M1 354 aa21.91■■□□□ 1.1
MRPL28-209ENST00000481453 AMIGO3Q86WK7 504 aa21.91■■□□□ 1.1
MRPL28-209ENST00000481453 OSBP2Q969R2 916 aa21.91■■□□□ 1.1
MRPL28-209ENST00000481453 DSCC1Q9BVC3 393 aa21.91■■□□□ 1.1
MRPL28-209ENST00000481453 CYP21A2P08686 494 aa21.9■■□□□ 1.1
MRPL28-209ENST00000481453 HSP90B1P14625 803 aaKnown RBP21.9■■□□□ 1.1
MRPL28-209ENST00000481453 ST3GAL1Q11201 340 aa21.9■■□□□ 1.1
MRPL28-209ENST00000481453 TBC1D9BQ66K14 1250 aa21.9■■□□□ 1.1
MRPL28-209ENST00000481453 BLOC1S2Q6QNY1 142 aa21.9■■□□□ 1.1
MRPL28-209ENST00000481453 C3orf67Q6ZVT6 689 aa21.9■■□□□ 1.1
MRPL28-209ENST00000481453 LPIN2Q92539 896 aa21.9■■□□□ 1.1
MRPL28-209ENST00000481453 NARFQ9UHQ1 456 aa21.9■■□□□ 1.1
MRPL28-209ENST00000481453 ARID4AP29374 1257 aaPredicted RBP21.9■■□□□ 1.1
MRPL28-209ENST00000481453 PHKA1P46020 1223 aa21.9■■□□□ 1.1
MRPL28-209ENST00000481453 CCDC102BQ68D86 513 aa21.9■■□□□ 1.1
MRPL28-209ENST00000481453 ALDH8A1Q9H2A2 487 aaPredicted RBP21.9■■□□□ 1.1
MRPL28-209ENST00000481453 TRPC5Q9UL62 973 aaPredicted RBP21.9■■□□□ 1.1
MRPL28-209ENST00000481453 WDR33Q9C0J8 1336 aaKnown RBP21.89■■□□□ 1.09
MRPL28-209ENST00000481453 ZSCAN30Q86W11 494 aa21.89■■□□□ 1.09
MRPL28-209ENST00000481453 SEPT12Q8IYM1 358 aa21.89■■□□□ 1.09
MRPL28-209ENST00000481453 MPHOSPH8Q99549 860 aa21.89■■□□□ 1.09
MRPL28-209ENST00000481453 SRP68Q9UHB9 627 aaKnown RBP21.89■■□□□ 1.09
MRPL28-209ENST00000481453 GNPATO15228 680 aa21.88■■□□□ 1.09
MRPL28-209ENST00000481453 HSPD1P10809 573 aaKnown RBP21.88■■□□□ 1.09
MRPL28-209ENST00000481453 KRT32Q14532 448 aa21.88■■□□□ 1.09
MRPL28-209ENST00000481453 TCEANC2Q96MN5 208 aa21.88■■□□□ 1.09
MRPL28-209ENST00000481453 TPCN1Q9ULQ1 816 aa21.88■■□□□ 1.09
MRPL28-209ENST00000481453 SNAP23O00161 211 aa21.88■■□□□ 1.09
MRPL28-209ENST00000481453 ZFYP08048 801 aaPredicted RBP21.88■■□□□ 1.09
MRPL28-209ENST00000481453 ME3Q16798 604 aa21.88■■□□□ 1.09
MRPL28-209ENST00000481453 FOXD4L6Q3SYB3 417 aaPredicted RBP21.88■■□□□ 1.09
MRPL28-209ENST00000481453 FOXD4L3Q6VB84 417 aaPredicted RBP21.88■■□□□ 1.09
MRPL28-209ENST00000481453 ZSCAN31Q96LW9 406 aaPredicted RBP21.88■■□□□ 1.09
MRPL28-209ENST00000481453 SH2B1Q9NRF2 756 aaPredicted RBP21.88■■□□□ 1.09
MRPL28-209ENST00000481453 TOB2Q14106 344 aaPredicted RBP21.87■■□□□ 1.09
MRPL28-209ENST00000481453 STOX1Q6ZVD7 989 aa21.87■■□□□ 1.09
MRPL28-209ENST00000481453 C4BP0C0L5 1744 aa21.87■■□□□ 1.09
MRPL28-209ENST00000481453 MYO5AQ9Y4I1 1855 aaKnown RBP21.87■■□□□ 1.09
MRPL28-209ENST00000481453 LAMA4Q16363 1823 aa21.87■■□□□ 1.09
MRPL28-209ENST00000481453 A0A1B0GUL6 1792 aa21.87■■□□□ 1.09
MRPL28-209ENST00000481453 C4AP0C0L4 1744 aa21.87■■□□□ 1.09
MRPL28-209ENST00000481453 FOXP2O15409 715 aa21.87■■□□□ 1.09
MRPL28-209ENST00000481453 LRRFIP1Q32MZ4 808 aaKnown RBP21.87■■□□□ 1.09
MRPL28-209ENST00000481453 IGHMBP2P38935 993 aaKnown RBP21.86■■□□□ 1.09
MRPL28-209ENST00000481453 SF3B3Q15393 1217 aaKnown RBP21.86■■□□□ 1.09
MRPL28-209ENST00000481453 BICDL1Q6ZP65 573 aa21.86■■□□□ 1.09
MRPL28-209ENST00000481453 PIH1D3Q9NQM4 214 aaKnown RBP21.86■■□□□ 1.09
MRPL28-209ENST00000481453 A0A0G2JLW4 131 aa21.86■■□□□ 1.09
MRPL28-209ENST00000481453 SLC5A1P13866 664 aa21.86■■□□□ 1.09
MRPL28-209ENST00000481453 CCDC83Q8IWF9 413 aa21.86■■□□□ 1.09
MRPL28-209ENST00000481453 APPBP2Q92624 585 aa21.86■■□□□ 1.09
MRPL28-209ENST00000481453 UQCRFS1P1P0C7P4 283 aa21.85■■□□□ 1.09
MRPL28-209ENST00000481453 SLC10A5Q5PT55 438 aa21.85■■□□□ 1.09
MRPL28-209ENST00000481453 SYAP1Q96A49 352 aaPredicted RBP21.85■■□□□ 1.09
MRPL28-209ENST00000481453 NEK1Q96PY6 1258 aa21.85■■□□□ 1.09
MRPL28-209ENST00000481453 TAF1P21675 1872 aa21.85■■□□□ 1.09
MRPL28-209ENST00000481453 MSNP26038 577 aaKnown RBP21.84■■□□□ 1.09
MRPL28-209ENST00000481453 PUS7LQ9H0K6 701 aaKnown RBP21.84■■□□□ 1.09
MRPL28-209ENST00000481453 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.84■■□□□ 1.09
MRPL28-209ENST00000481453 PDLIM2Q96JY6 352 aa21.84■■□□□ 1.09
MRPL28-209ENST00000481453 GDPD2Q9HCC8 539 aa21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms