RNA–Protein interactions for RNA: ENST00000481194.1

CCM2-214, Transcript of CCM2 scaffold protein, humanhuman

TSL 1 (best)

Gene CCM2, Length 5,304 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-214ENST00000481194 KBTBD3Q8NAB2 608 aa22.53■■□□□ 1.2
CCM2-214ENST00000481194 USPL1Q5W0Q7 1092 aa22.53■■□□□ 1.2
CCM2-214ENST00000481194 SPATA32Q96LK8 384 aa22.53■■□□□ 1.2
CCM2-214ENST00000481194 KAT14Q9H8E8 782 aa22.53■■□□□ 1.2
CCM2-214ENST00000481194 KDM4AO75164 1064 aa22.52■■□□□ 1.2
CCM2-214ENST00000481194 TIMM10P62072 90 aa22.52■■□□□ 1.2
CCM2-214ENST00000481194 KLHDC4Q8TBB5 520 aa22.52■■□□□ 1.2
CCM2-214ENST00000481194 CCDC12Q8WUD4 166 aaPredicted RBP22.52■■□□□ 1.2
CCM2-214ENST00000481194 C8orf76Q96K31 380 aa22.52■■□□□ 1.2
CCM2-214ENST00000481194 APPBP2Q92624 585 aa22.52■■□□□ 1.2
CCM2-214ENST00000481194 ATP10DQ9P241 1426 aa22.52■■□□□ 1.2
CCM2-214ENST00000481194 PRAMEF22A3QJZ6 481 aa22.52■■□□□ 1.2
CCM2-214ENST00000481194 TSR1Q2NL82 804 aaKnown RBP22.52■■□□□ 1.2
CCM2-214ENST00000481194 TRIM37O94972 964 aa22.51■■□□□ 1.19
CCM2-214ENST00000481194 JDP2Q8WYK2 163 aa22.51■■□□□ 1.19
CCM2-214ENST00000481194 IQSEC3Q9UPP2 1182 aaPredicted RBP22.51■■□□□ 1.19
CCM2-214ENST00000481194 ADRA2BP18089 450 aa22.51■■□□□ 1.19
CCM2-214ENST00000481194 RPS6KA4O75676 772 aa22.5■■□□□ 1.19
CCM2-214ENST00000481194 SLC27A3Q5K4L6 730 aa22.5■■□□□ 1.19
CCM2-214ENST00000481194 USP26Q9BXU7 913 aa22.5■■□□□ 1.19
CCM2-214ENST00000481194 HAND2P61296 217 aa22.5■■□□□ 1.19
CCM2-214ENST00000481194 WTAPQ15007 396 aa22.5■■□□□ 1.19
CCM2-214ENST00000481194 CREBRFQ8IUR6 639 aa22.5■■□□□ 1.19
CCM2-214ENST00000481194 SCAND2PQ9GZW5 306 aaPredicted RBP22.5■■□□□ 1.19
CCM2-214ENST00000481194 SPATA31A5Q5VU36 1347 aa22.5■■□□□ 1.19
CCM2-214ENST00000481194 SPATA31A7Q8IWB4 1347 aa22.5■■□□□ 1.19
CCM2-214ENST00000481194 ME1P48163 572 aa22.5■■□□□ 1.19
CCM2-214ENST00000481194 METAP2P50579 478 aaKnown RBP eCLIP22.5■■□□□ 1.19
CCM2-214ENST00000481194 CREB3L3Q68CJ9 461 aa22.5■■□□□ 1.19
CCM2-214ENST00000481194 DDX11Q96FC9 970 aa22.5■■□□□ 1.19
CCM2-214ENST00000481194 RTL9Q8NET4 1388 aa22.49■■□□□ 1.19
CCM2-214ENST00000481194 NLRP10Q86W26 655 aa22.49■■□□□ 1.19
CCM2-214ENST00000481194 TBC1D22AQ8WUA7 517 aa22.49■■□□□ 1.19
CCM2-214ENST00000481194 ATP2B1P20020 1258 aa22.49■■□□□ 1.19
CCM2-214ENST00000481194 CCAR1Q8IX12 1150 aaKnown RBP22.49■■□□□ 1.19
CCM2-214ENST00000481194 CALM1P0DP23 149 aa22.49■■□□□ 1.19
CCM2-214ENST00000481194 CALM2P0DP24 149 aa22.49■■□□□ 1.19
CCM2-214ENST00000481194 CALM3P0DP25 149 aa22.49■■□□□ 1.19
CCM2-214ENST00000481194 ATP2B4P23634 1241 aa22.48■■□□□ 1.19
CCM2-214ENST00000481194 DPP8Q6V1X1 898 aaPredicted RBP22.48■■□□□ 1.19
CCM2-214ENST00000481194 GNAQP50148 359 aa22.48■■□□□ 1.19
CCM2-214ENST00000481194 SPATA5Q8NB90 893 aa22.48■■□□□ 1.19
CCM2-214ENST00000481194 CEMIPQ8WUJ3 1361 aa22.48■■□□□ 1.19
CCM2-214ENST00000481194 OTUD7AQ8TE49 926 aaPredicted RBP22.48■■□□□ 1.19
CCM2-214ENST00000481194 STAP2Q9UGK3 403 aa22.48■■□□□ 1.19
CCM2-214ENST00000481194 PXDNLA1KZ92 1463 aa22.47■■□□□ 1.19
CCM2-214ENST00000481194 IARSP41252 1262 aaKnown RBP22.47■■□□□ 1.19
CCM2-214ENST00000481194 TRAF1Q13077 416 aa22.47■■□□□ 1.19
CCM2-214ENST00000481194 NKX1-1Q15270 411 aaPredicted RBP22.47■■□□□ 1.19
CCM2-214ENST00000481194 MCM4P33991 863 aa22.47■■□□□ 1.19
CCM2-214ENST00000481194 RBM25P49756 843 aaKnown RBP22.47■■□□□ 1.19
CCM2-214ENST00000481194 DACH1Q9UI36 760 aa22.46■■□□□ 1.19
CCM2-214ENST00000481194 SGSM2O43147 1006 aa22.46■■□□□ 1.19
CCM2-214ENST00000481194 TSPY3P0CV98 308 aa22.46■■□□□ 1.19
CCM2-214ENST00000481194 TSPY8P0CW00 308 aa22.46■■□□□ 1.19
CCM2-214ENST00000481194 H7C1W4 665 aa22.46■■□□□ 1.19
CCM2-214ENST00000481194 CCDC96Q2M329 555 aa22.46■■□□□ 1.19
CCM2-214ENST00000481194 CAVIN1Q6NZI2 390 aaKnown RBP22.46■■□□□ 1.19
CCM2-214ENST00000481194 RBM27Q9P2N5 1060 aaKnown RBP22.46■■□□□ 1.19
CCM2-214ENST00000481194 MAP2P11137 1827 aaKnown RBP22.46■■□□□ 1.19
CCM2-214ENST00000481194 OSBPL3Q9H4L5 887 aa22.45■■□□□ 1.19
CCM2-214ENST00000481194 POLA2Q14181 598 aa22.45■■□□□ 1.18
CCM2-214ENST00000481194 TMX3Q96JJ7 454 aa22.45■■□□□ 1.18
CCM2-214ENST00000481194 TSPY26PQ9H489 355 aa22.45■■□□□ 1.18
CCM2-214ENST00000481194 ADAMTSL3P82987 1691 aa22.45■■□□□ 1.18
CCM2-214ENST00000481194 PES1O00541 588 aaKnown RBP22.45■■□□□ 1.18
CCM2-214ENST00000481194 HSPA1LP34931 641 aa22.45■■□□□ 1.18
CCM2-214ENST00000481194 EHMT1Q9H9B1 1298 aa22.45■■□□□ 1.18
CCM2-214ENST00000481194 CYP19A1P11511 503 aaPredicted RBP22.45■■□□□ 1.18
CCM2-214ENST00000481194 GJB2P29033 226 aa22.45■■□□□ 1.18
CCM2-214ENST00000481194 MRE11P49959 708 aa22.45■■□□□ 1.18
CCM2-214ENST00000481194 SEMA3EO15041 775 aa22.44■■□□□ 1.18
CCM2-214ENST00000481194 ZBTB43O43298 467 aa22.44■■□□□ 1.18
CCM2-214ENST00000481194 FMN2Q9NZ56 1722 aa22.44■■□□□ 1.18
CCM2-214ENST00000481194 UBE4AQ14139 1066 aa22.44■■□□□ 1.18
CCM2-214ENST00000481194 CDHR2Q9BYE9 1310 aa22.44■■□□□ 1.18
CCM2-214ENST00000481194 MBD4O95243 580 aa22.44■■□□□ 1.18
CCM2-214ENST00000481194 CEBPZQ03701 1054 aaKnown RBP22.44■■□□□ 1.18
CCM2-214ENST00000481194 IFIT1BQ5T764 474 aaKnown RBP22.44■■□□□ 1.18
CCM2-214ENST00000481194 TICAM2Q86XR7 235 aa22.44■■□□□ 1.18
CCM2-214ENST00000481194 BRF1Q92994 677 aa22.44■■□□□ 1.18
CCM2-214ENST00000481194 RIMBP2O15034 1052 aa22.44■■□□□ 1.18
CCM2-214ENST00000481194 DHX32Q7L7V1 743 aaKnown RBP22.44■■□□□ 1.18
CCM2-214ENST00000481194 COL15A1P39059 1388 aa22.43■■□□□ 1.18
CCM2-214ENST00000481194 KLF18A0A0U1RQI7 1052 aa22.43■■□□□ 1.18
CCM2-214ENST00000481194 RUFY3Q7L099 469 aa22.43■■□□□ 1.18
CCM2-214ENST00000481194 CNKSR1Q969H4 720 aa22.43■■□□□ 1.18
CCM2-214ENST00000481194 TTC6Q86TZ1 520 aa22.43■■□□□ 1.18
CCM2-214ENST00000481194 MPNDQ8N594 471 aa22.43■■□□□ 1.18
CCM2-214ENST00000481194 HAUS7Q99871 368 aa22.43■■□□□ 1.18
CCM2-214ENST00000481194 PRC1O43663 620 aa22.43■■□□□ 1.18
CCM2-214ENST00000481194 TAF5LO75529 589 aa22.42■■□□□ 1.18
CCM2-214ENST00000481194 ZSCAN16Q9H4T2 348 aaPredicted RBP22.42■■□□□ 1.18
CCM2-214ENST00000481194 STX6O43752 255 aa22.42■■□□□ 1.18
CCM2-214ENST00000481194 MTX1Q13505 466 aa22.42■■□□□ 1.18
CCM2-214ENST00000481194 GREM2Q9H772 168 aa22.42■■□□□ 1.18
CCM2-214ENST00000481194 ANKRD26Q9UPS8 1709 aa22.42■■□□□ 1.18
CCM2-214ENST00000481194 Q6ZUG5 572 aa22.42■■□□□ 1.18
CCM2-214ENST00000481194 CUL5Q93034 780 aa22.42■■□□□ 1.18
CCM2-214ENST00000481194 NARFQ9UHQ1 456 aa22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms