RNA–Protein interactions for RNA: ENST00000480900.1

HSPG2-209, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 500 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-209ENST00000480900 ZNF594Q96JF6 807 aaPredicted RBP21.41■■□□□ 1.02
HSPG2-209ENST00000480900 NOB1Q9ULX3 412 aaKnown RBP21.41■■□□□ 1.02
HSPG2-209ENST00000480900 C15orf52Q6ZUT6 534 aaKnown RBP21.4■■□□□ 1.02
HSPG2-209ENST00000480900 ANKRD44Q8N8A2 993 aa21.4■■□□□ 1.02
HSPG2-209ENST00000480900 PCNTO95613 3336 aa21.4■■□□□ 1.02
HSPG2-209ENST00000480900 KLRK1P26718 216 aa21.39■■□□□ 1.01
HSPG2-209ENST00000480900 SAMD7Q7Z3H4 446 aa21.39■■□□□ 1.01
HSPG2-209ENST00000480900 HELBQ8NG08 1087 aaPredicted RBP21.39■■□□□ 1.01
HSPG2-209ENST00000480900 GMLQ99445 158 aa21.39■■□□□ 1.01
HSPG2-209ENST00000480900 CNNM1Q9NRU3 951 aa21.39■■□□□ 1.01
HSPG2-209ENST00000480900 CNTNAP1P78357 1384 aa21.38■■□□□ 1.01
HSPG2-209ENST00000480900 IRS2Q9Y4H2 1338 aa21.38■■□□□ 1.01
HSPG2-209ENST00000480900 TAF5LO75529 589 aa21.38■■□□□ 1.01
HSPG2-209ENST00000480900 ARHGAP45Q92619 1136 aa21.38■■□□□ 1.01
HSPG2-209ENST00000480900 ZNF280AP59817 542 aaPredicted RBP21.37■■□□□ 1.01
HSPG2-209ENST00000480900 TBC1D10BQ4KMP7 808 aaPredicted RBP21.37■■□□□ 1.01
HSPG2-209ENST00000480900 STRIP1Q5VSL9 837 aa21.37■■□□□ 1.01
HSPG2-209ENST00000480900 MYO3BQ8WXR4 1341 aa21.36■■□□□ 1.01
HSPG2-209ENST00000480900 TRAF5O00463 557 aa21.36■■□□□ 1.01
HSPG2-209ENST00000480900 EGFRP00533 1210 aa21.36■■□□□ 1.01
HSPG2-209ENST00000480900 KIF4BQ2VIQ3 1234 aa21.36■■□□□ 1.01
HSPG2-209ENST00000480900 DACT2Q5SW24 774 aa21.36■■□□□ 1.01
HSPG2-209ENST00000480900 SNAP23O00161 211 aa21.35■■□□□ 1.01
HSPG2-209ENST00000480900 USP17L8P0C7I0 530 aa21.35■■□□□ 1.01
HSPG2-209ENST00000480900 FMR1Q06787 632 aaKnown RBP eCLIP21.35■■□□□ 1.01
HSPG2-209ENST00000480900 CDC37L1Q7L3B6 337 aa21.35■■□□□ 1.01
HSPG2-209ENST00000480900 GLIS2Q9BZE0 524 aaPredicted RBP21.35■■□□□ 1.01
HSPG2-209ENST00000480900 MKRN1Q9UHC7 482 aaKnown RBP21.35■■□□□ 1.01
HSPG2-209ENST00000480900 ZBED9Q6R2W3 1325 aa21.34■■□□□ 1.01
HSPG2-209ENST00000480900 RBM26Q5T8P6 1007 aaKnown RBP21.34■■□□□ 1.01
HSPG2-209ENST00000480900 ZNF804AQ7Z570 1209 aa21.34■■□□□ 1.01
HSPG2-209ENST00000480900 PUS3Q9BZE2 481 aaKnown RBP21.34■■□□□ 1.01
HSPG2-209ENST00000480900 CD209Q9NNX6 404 aa21.34■■□□□ 1.01
HSPG2-209ENST00000480900 RIPOR2Q9Y4F9 1068 aa21.34■■□□□ 1.01
HSPG2-209ENST00000480900 MROH5Q6ZUA9 1318 aa21.33■■□□□ 1.01
HSPG2-209ENST00000480900 RASSF10A6NK89 507 aa21.33■■□□□ 1.01
HSPG2-209ENST00000480900 IPO8O15397 1037 aaKnown RBP21.33■■□□□ 1.01
HSPG2-209ENST00000480900 PLIN1O60240 522 aa21.33■■□□□ 1.01
HSPG2-209ENST00000480900 UBTFL1P0CB47 393 aaPredicted RBP21.33■■□□□ 1.01
HSPG2-209ENST00000480900 UBE4AQ14139 1066 aa21.33■■□□□ 1.01
HSPG2-209ENST00000480900 TTLL5Q6EMB2 1281 aa21.33■■□□□ 1.01
HSPG2-209ENST00000480900 FBXW7Q969H0 707 aa21.33■■□□□ 1.01
HSPG2-209ENST00000480900 MMP14P50281 582 aa21.32■■□□□ 1
HSPG2-209ENST00000480900 CST9Q5W186 159 aa21.32■■□□□ 1
HSPG2-209ENST00000480900 INTS3Q68E01 1043 aaKnown RBP21.32■■□□□ 1
HSPG2-209ENST00000480900 ABT1Q9ULW3 272 aaKnown RBP21.32■■□□□ 1
HSPG2-209ENST00000480900 HDAC5Q9UQL6 1122 aa21.32■■□□□ 1
HSPG2-209ENST00000480900 IL1R1P14778 569 aa21.31■■□□□ 1
HSPG2-209ENST00000480900 DCPSQ96C86 337 aaKnown RBP21.31■■□□□ 1
HSPG2-209ENST00000480900 MXD3Q9BW11 206 aa21.31■■□□□ 1
HSPG2-209ENST00000480900 MYOZ2Q9NPC6 264 aa21.31■■□□□ 1
HSPG2-209ENST00000480900 BCAR3O75815 825 aa21.3■■□□□ 1
HSPG2-209ENST00000480900 CELF2O95319 508 aaKnown RBP21.3■■□□□ 1
HSPG2-209ENST00000480900 GTF2IP78347 998 aa21.3■■□□□ 1
HSPG2-209ENST00000480900 DEFB115Q30KQ5 88 aa21.3■■□□□ 1
HSPG2-209ENST00000480900 KRT26Q7Z3Y9 468 aa21.3■■□□□ 1
HSPG2-209ENST00000480900 OGFOD1Q8N543 542 aa21.3■■□□□ 1
HSPG2-209ENST00000480900 ARAP2Q8WZ64 1704 aa21.29■■□□□ 1
HSPG2-209ENST00000480900 ECM29Q5VYK3 1845 aa21.29■■□□□ 1
HSPG2-209ENST00000480900 TRIM27P14373 513 aa21.29■■□□□ 1
HSPG2-209ENST00000480900 LRRC24Q50LG9 513 aa21.29■■□□□ 1
HSPG2-209ENST00000480900 ATF7IPQ6VMQ6 1270 aa21.29■■□□□ 1
HSPG2-209ENST00000480900 USP48Q86UV5 1035 aa21.29■■□□□ 1
HSPG2-209ENST00000480900 GGA3Q9NZ52 723 aa21.29■■□□□ 1
HSPG2-209ENST00000480900 MYH13Q9UKX3 1938 aa21.28■■□□□ 1
HSPG2-209ENST00000480900 RFX5P48382 616 aaPredicted RBP21.28■■□□□ 1
HSPG2-209ENST00000480900 VEGFBP49765 207 aa21.28■■□□□ 1
HSPG2-209ENST00000480900 SCARF1Q14162 830 aa21.28■■□□□ 1
HSPG2-209ENST00000480900 METTL24Q5JXM2 366 aa21.28■■□□□ 1
HSPG2-209ENST00000480900 VGLL2Q8N8G2 317 aa21.28■■□□□ 1
HSPG2-209ENST00000480900 KLHDC4Q8TBB5 520 aa21.28■■□□□ 1
HSPG2-209ENST00000480900 MEIS3Q99687 375 aa21.28■■□□□ 1
HSPG2-209ENST00000480900 TLL2Q9Y6L7 1015 aa21.28■■□□□ 1
HSPG2-209ENST00000480900 THSD7BQ9C0I4 1608 aa21.27■■□□□ 1
HSPG2-209ENST00000480900 SULF1Q8IWU6 871 aa21.27■■□□□ 1
HSPG2-209ENST00000480900 FRAT1Q92837 279 aaPredicted RBP21.27■■□□□ 1
HSPG2-209ENST00000480900 LRRFIP2Q9Y608 721 aaKnown RBP21.27■■□□□ 1
HSPG2-209ENST00000480900 ASTN2O75129 1339 aaPredicted RBP21.27■□□□□ 0.99
HSPG2-209ENST00000480900 PITPNM2Q9BZ72 1349 aa21.27■□□□□ 0.99
HSPG2-209ENST00000480900 PDE8BO95263 885 aa21.26■□□□□ 0.99
HSPG2-209ENST00000480900 GNAI3P08754 354 aa21.26■□□□□ 0.99
HSPG2-209ENST00000480900 FKBP1AP62942 108 aaKnown RBP21.26■□□□□ 0.99
HSPG2-209ENST00000480900 PTPN12Q05209 780 aaKnown RBP21.26■□□□□ 0.99
HSPG2-209ENST00000480900 ZNF408Q9H9D4 720 aa21.26■□□□□ 0.99
HSPG2-209ENST00000480900 HDAC9Q9UKV0 1011 aa21.26■□□□□ 0.99
HSPG2-209ENST00000480900 ADM5C9JUS6 153 aa21.25■□□□□ 0.99
HSPG2-209ENST00000480900 EYA2O00167 538 aa21.25■□□□□ 0.99
HSPG2-209ENST00000480900 HIBADHP31937 336 aaKnown RBP21.25■□□□□ 0.99
HSPG2-209ENST00000480900 GYG1P46976 350 aa21.25■□□□□ 0.99
HSPG2-209ENST00000480900 ANGEL2Q5VTE6 544 aaKnown RBP21.25■□□□□ 0.99
HSPG2-209ENST00000480900 ZKSCAN2Q63HK3 967 aa21.25■□□□□ 0.99
HSPG2-209ENST00000480900 SAPCD2Q86UD0 394 aa21.25■□□□□ 0.99
HSPG2-209ENST00000480900 KIAA0825Q8IV33 1275 aa21.25■□□□□ 0.99
HSPG2-209ENST00000480900 TDRD7Q8NHU6 1098 aaKnown RBP21.25■□□□□ 0.99
HSPG2-209ENST00000480900 FAM84BQ96KN1 310 aaPredicted RBP21.25■□□□□ 0.99
HSPG2-209ENST00000480900 FBXO3Q9UK99 471 aa21.25■□□□□ 0.99
HSPG2-209ENST00000480900 SASH1O94885 1247 aa21.24■□□□□ 0.99
HSPG2-209ENST00000480900 ECE1P42892 770 aa21.24■□□□□ 0.99
HSPG2-209ENST00000480900 CERS5Q8N5B7 392 aa21.24■□□□□ 0.99
HSPG2-209ENST00000480900 HHIPL1Q96JK4 782 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms