RNA–Protein interactions for RNA: ENST00000480057.1

VTI1A-204, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-204ENST00000480057 PALD1Q9ULE6 856 aa13.24□□□□□ -0.29
VTI1A-204ENST00000480057 SNX14Q9Y5W7 946 aa13.24□□□□□ -0.29
VTI1A-204ENST00000480057 U3KPZ7 1027 aaPredicted RBP13.24□□□□□ -0.29
VTI1A-204ENST00000480057 MYH7P12883 1935 aa13.23□□□□□ -0.29
VTI1A-204ENST00000480057 TAF5LO75529 589 aa13.23□□□□□ -0.29
VTI1A-204ENST00000480057 RPS8P62241 208 aaKnown RBP13.23□□□□□ -0.29
VTI1A-204ENST00000480057 PTH1RQ03431 593 aa13.23□□□□□ -0.29
VTI1A-204ENST00000480057 DSCC1Q9BVC3 393 aa13.23□□□□□ -0.29
VTI1A-204ENST00000480057 CHMP5Q9NZZ3 219 aa13.23□□□□□ -0.29
VTI1A-204ENST00000480057 RBM8AQ9Y5S9 174 aaKnown RBP13.23□□□□□ -0.29
VTI1A-204ENST00000480057 TNRC6CQ9HCJ0 1690 aaKnown RBP13.23□□□□□ -0.29
VTI1A-204ENST00000480057 ZNF804BA4D1E1 1349 aa13.22□□□□□ -0.29
VTI1A-204ENST00000480057 CD2BP2O95400 341 aaKnown RBP13.22□□□□□ -0.29
VTI1A-204ENST00000480057 DDIT3P35638 169 aa13.22□□□□□ -0.29
VTI1A-204ENST00000480057 MCAMP43121 646 aa13.22□□□□□ -0.29
VTI1A-204ENST00000480057 ZAP70P43403 619 aa13.22□□□□□ -0.29
VTI1A-204ENST00000480057 NEK4P51957 841 aa13.22□□□□□ -0.29
VTI1A-204ENST00000480057 ST5P78524 1137 aa13.22□□□□□ -0.29
VTI1A-204ENST00000480057 FKBP4Q02790 459 aaKnown RBP eCLIP13.22□□□□□ -0.29
VTI1A-204ENST00000480057 CREB3L3Q68CJ9 461 aa13.22□□□□□ -0.29
VTI1A-204ENST00000480057 MINPP1Q9UNW1 487 aa13.22□□□□□ -0.29
VTI1A-204ENST00000480057 COL4A1P02462 1669 aa13.21□□□□□ -0.29
VTI1A-204ENST00000480057 PDS5AQ29RF7 1337 aaKnown RBP13.21□□□□□ -0.29
VTI1A-204ENST00000480057 DOCK2Q92608 1830 aa13.21□□□□□ -0.29
VTI1A-204ENST00000480057 SEMA3EO15041 775 aa13.21□□□□□ -0.29
VTI1A-204ENST00000480057 NPHP1O15259 732 aa13.21□□□□□ -0.29
VTI1A-204ENST00000480057 IGSF3O75054 1194 aa13.21□□□□□ -0.29
VTI1A-204ENST00000480057 SERPINB2P05120 415 aa13.21□□□□□ -0.29
VTI1A-204ENST00000480057 PSMA5P28066 241 aa13.21□□□□□ -0.29
VTI1A-204ENST00000480057 PHKA1P46020 1223 aa13.21□□□□□ -0.29
VTI1A-204ENST00000480057 KCNJ4P48050 445 aa13.21□□□□□ -0.29
VTI1A-204ENST00000480057 SCARF1Q14162 830 aa13.21□□□□□ -0.29
VTI1A-204ENST00000480057 KRT32Q14532 448 aa13.21□□□□□ -0.29
VTI1A-204ENST00000480057 UBE3CQ15386 1083 aa13.21□□□□□ -0.29
VTI1A-204ENST00000480057 CRY2Q49AN0 593 aa13.21□□□□□ -0.29
VTI1A-204ENST00000480057 PRR5LQ6MZQ0 368 aa13.21□□□□□ -0.29
VTI1A-204ENST00000480057 ZNF589Q86UQ0 364 aaPredicted RBP13.21□□□□□ -0.29
VTI1A-204ENST00000480057 NLGN1Q8N2Q7 840 aa13.21□□□□□ -0.29
VTI1A-204ENST00000480057 HELBQ8NG08 1087 aaPredicted RBP13.21□□□□□ -0.29
VTI1A-204ENST00000480057 APPBP2Q92624 585 aa13.21□□□□□ -0.29
VTI1A-204ENST00000480057 CELF1Q92879 486 aaKnown RBP13.21□□□□□ -0.29
VTI1A-204ENST00000480057 GNL3LQ9NVN8 582 aaKnown RBP13.21□□□□□ -0.29
VTI1A-204ENST00000480057 NDUFB9Q9Y6M9 179 aa13.21□□□□□ -0.29
VTI1A-204ENST00000480057 QSER1Q2KHR3 1735 aa13.21□□□□□ -0.3
VTI1A-204ENST00000480057 NRXN2Q9P2S2 1712 aa13.21□□□□□ -0.3
VTI1A-204ENST00000480057 RPAP1Q9BWH6 1393 aaPredicted RBP13.2□□□□□ -0.3
VTI1A-204ENST00000480057 MAST3O60307 1309 aa13.2□□□□□ -0.3
VTI1A-204ENST00000480057 SLC27A2O14975 620 aa13.2□□□□□ -0.3
VTI1A-204ENST00000480057 HSP90AA1P07900 732 aaKnown RBP13.2□□□□□ -0.3
VTI1A-204ENST00000480057 GRAPQ13588 217 aa13.2□□□□□ -0.3
VTI1A-204ENST00000480057 PRPF40BQ6NWY9 871 aaKnown RBP13.2□□□□□ -0.3
VTI1A-204ENST00000480057 TMED8Q6PL24 325 aaPredicted RBP13.2□□□□□ -0.3
VTI1A-204ENST00000480057 POTEAQ6S8J7 498 aa13.2□□□□□ -0.3
VTI1A-204ENST00000480057 SPATA5Q8NB90 893 aa13.2□□□□□ -0.3
VTI1A-204ENST00000480057 GRAPLQ8TC17 118 aaPredicted RBP13.2□□□□□ -0.3
VTI1A-204ENST00000480057 ALDH8A1Q9H2A2 487 aaPredicted RBP13.2□□□□□ -0.3
VTI1A-204ENST00000480057 CWC22Q9HCG8 908 aaKnown RBP13.2□□□□□ -0.3
VTI1A-204ENST00000480057 ZSWIM6Q9HCJ5 1215 aa13.2□□□□□ -0.3
VTI1A-204ENST00000480057 KLRG2A4D1S0 409 aaPredicted RBP13.19□□□□□ -0.3
VTI1A-204ENST00000480057 POLRMTO00411 1230 aaKnown RBP13.19□□□□□ -0.3
VTI1A-204ENST00000480057 CYP2E1P05181 493 aaPredicted RBP13.19□□□□□ -0.3
VTI1A-204ENST00000480057 ADD2P35612 726 aa13.19□□□□□ -0.3
VTI1A-204ENST00000480057 ZNF827Q17R98 1081 aa13.19□□□□□ -0.3
VTI1A-204ENST00000480057 VPS53Q5VIR6 699 aa13.19□□□□□ -0.3
VTI1A-204ENST00000480057 RASEFQ8IZ41 740 aa13.19□□□□□ -0.3
VTI1A-204ENST00000480057 TTC14Q96N46 770 aa13.19□□□□□ -0.3
VTI1A-204ENST00000480057 TFCP2L1Q9NZI6 479 aa13.19□□□□□ -0.3
VTI1A-204ENST00000480057 HOXA10P31260 410 aaPredicted RBP13.18□□□□□ -0.3
VTI1A-204ENST00000480057 CUL4AQ13619 759 aa13.18□□□□□ -0.3
VTI1A-204ENST00000480057 RASGRF1Q13972 1273 aa13.18□□□□□ -0.3
VTI1A-204ENST00000480057 CAVIN4Q5BKX8 364 aa13.18□□□□□ -0.3
VTI1A-204ENST00000480057 TMC4Q7Z404 712 aa13.18□□□□□ -0.3
VTI1A-204ENST00000480057 INTS4Q96HW7 963 aaKnown RBP13.18□□□□□ -0.3
VTI1A-204ENST00000480057 SLKQ9H2G2 1235 aaPredicted RBP13.18□□□□□ -0.3
VTI1A-204ENST00000480057 CTNNA3Q9UI47 895 aa13.18□□□□□ -0.3
VTI1A-204ENST00000480057 LEMD3Q9Y2U8 911 aa13.18□□□□□ -0.3
VTI1A-204ENST00000480057 DDR1Q08345 913 aa13.17□□□□□ -0.3
VTI1A-204ENST00000480057 MAP3K12Q12852 859 aa13.17□□□□□ -0.3
VTI1A-204ENST00000480057 C15orf52Q6ZUT6 534 aaKnown RBP13.17□□□□□ -0.3
VTI1A-204ENST00000480057 COL23A1Q86Y22 540 aaPredicted RBP13.17□□□□□ -0.3
VTI1A-204ENST00000480057 RPGRQ92834 1020 aaKnown RBP13.17□□□□□ -0.3
VTI1A-204ENST00000480057 OSBP2Q969R2 916 aa13.17□□□□□ -0.3
VTI1A-204ENST00000480057 RBM17Q96I25 401 aaKnown RBP13.17□□□□□ -0.3
VTI1A-204ENST00000480057 CRAMP1Q96RY5 1269 aa13.17□□□□□ -0.3
VTI1A-204ENST00000480057 PIH1D3Q9NQM4 214 aaKnown RBP13.17□□□□□ -0.3
VTI1A-204ENST00000480057 DENND2AQ9ULE3 1009 aa13.17□□□□□ -0.3
VTI1A-204ENST00000480057 CYP46A1Q9Y6A2 500 aa13.17□□□□□ -0.3
VTI1A-204ENST00000480057 TAF1P21675 1872 aa13.16□□□□□ -0.3
VTI1A-204ENST00000480057 BBOX1O75936 387 aa13.16□□□□□ -0.3
VTI1A-204ENST00000480057 HMGB1P09429 215 aaKnown RBP13.16□□□□□ -0.3
VTI1A-204ENST00000480057 HSPD1P10809 573 aaKnown RBP13.16□□□□□ -0.3
VTI1A-204ENST00000480057 CASTP20810 708 aaKnown RBP13.16□□□□□ -0.3
VTI1A-204ENST00000480057 ANKRD1Q15327 319 aa13.16□□□□□ -0.3
VTI1A-204ENST00000480057 WASHC4Q2M389 1173 aa13.16□□□□□ -0.3
VTI1A-204ENST00000480057 PI16Q6UXB8 463 aa13.16□□□□□ -0.3
VTI1A-204ENST00000480057 RUFY3Q7L099 469 aa13.16□□□□□ -0.3
VTI1A-204ENST00000480057 FBXO33Q7Z6M2 555 aa13.16□□□□□ -0.3
VTI1A-204ENST00000480057 TMX3Q96JJ7 454 aa13.16□□□□□ -0.3
VTI1A-204ENST00000480057 ZSCAN31Q96LW9 406 aaPredicted RBP13.16□□□□□ -0.3
VTI1A-204ENST00000480057 JAKMIP1Q96N16 626 aaKnown RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms