RNA–Protein interactions for RNA: ENST00000480016.1

EFEMP1-211, Transcript of EGF containing fibulin extracellular matrix protein 1, humanhuman

TSL 2

Gene EFEMP1, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFEMP1-211ENST00000480016 MTFR1Q15390 333 aa11.08□□□□□ -0.64
EFEMP1-211ENST00000480016 VARS2Q5ST30 1063 aaKnown RBP11.08□□□□□ -0.64
EFEMP1-211ENST00000480016 PRR5LQ6MZQ0 368 aa11.08□□□□□ -0.64
EFEMP1-211ENST00000480016 INTS5Q6P9B9 1019 aaKnown RBP11.08□□□□□ -0.64
EFEMP1-211ENST00000480016 SPNS2Q8IVW8 549 aa11.08□□□□□ -0.64
EFEMP1-211ENST00000480016 NARFQ9UHQ1 456 aa11.08□□□□□ -0.64
EFEMP1-211ENST00000480016 COL2A1P02458 1487 aaPredicted RBP11.07□□□□□ -0.64
EFEMP1-211ENST00000480016 GJA8P48165 433 aa11.07□□□□□ -0.64
EFEMP1-211ENST00000480016 CABP4P57796 275 aa11.07□□□□□ -0.64
EFEMP1-211ENST00000480016 ZNF530Q6P9A1 599 aaPredicted RBP11.07□□□□□ -0.64
EFEMP1-211ENST00000480016 NKX2-3Q8TAU0 364 aa11.07□□□□□ -0.64
EFEMP1-211ENST00000480016 PSMD1Q99460 953 aa11.07□□□□□ -0.64
EFEMP1-211ENST00000480016 UBE2OQ9C0C9 1292 aaKnown RBP11.07□□□□□ -0.64
EFEMP1-211ENST00000480016 ZMYND8Q9ULU4 1186 aaPredicted RBP11.07□□□□□ -0.64
EFEMP1-211ENST00000480016 SMIM22K7EJ46 135 aa11.06□□□□□ -0.64
EFEMP1-211ENST00000480016 ALDH1A1P00352 501 aa11.06□□□□□ -0.64
EFEMP1-211ENST00000480016 MTHFSP49914 203 aa11.06□□□□□ -0.64
EFEMP1-211ENST00000480016 SREBF2Q12772 1141 aa11.06□□□□□ -0.64
EFEMP1-211ENST00000480016 FASNP49327 2511 aaKnown RBP11.05□□□□□ -0.64
EFEMP1-211ENST00000480016 ANKRD11Q6UB99 2663 aaPredicted RBP11.05□□□□□ -0.64
EFEMP1-211ENST00000480016 SHTN1A0MZ66 631 aa11.05□□□□□ -0.64
EFEMP1-211ENST00000480016 ITGB8P26012 769 aa11.05□□□□□ -0.64
EFEMP1-211ENST00000480016 SULT6B1Q6IMI4 303 aa11.05□□□□□ -0.64
EFEMP1-211ENST00000480016 SNED1Q8TER0 1413 aa11.05□□□□□ -0.64
EFEMP1-211ENST00000480016 FARP2O94887 1054 aaPredicted RBP11.04□□□□□ -0.64
EFEMP1-211ENST00000480016 CXCL9Q07325 125 aa11.04□□□□□ -0.64
EFEMP1-211ENST00000480016 ERMP1Q7Z2K6 904 aa11.04□□□□□ -0.64
EFEMP1-211ENST00000480016 KHSRPQ92945 711 aaKnown RBP eCLIP11.04□□□□□ -0.64
EFEMP1-211ENST00000480016 ALPK3Q96L96 1907 aa11.03□□□□□ -0.64
EFEMP1-211ENST00000480016 FAM86C2PA6NEL3 165 aa11.03□□□□□ -0.64
EFEMP1-211ENST00000480016 GJB1P08034 283 aa11.03□□□□□ -0.64
EFEMP1-211ENST00000480016 MRPS5P82675 430 aaKnown RBP11.03□□□□□ -0.64
EFEMP1-211ENST00000480016 MMRN1Q13201 1228 aa11.03□□□□□ -0.64
EFEMP1-211ENST00000480016 MOB2Q70IA6 237 aa11.03□□□□□ -0.64
EFEMP1-211ENST00000480016 ZNF687Q8N1G0 1237 aa11.03□□□□□ -0.64
EFEMP1-211ENST00000480016 LARGE2Q8N3Y3 721 aa11.03□□□□□ -0.64
EFEMP1-211ENST00000480016 TTYH1Q9H313 450 aaPredicted RBP11.03□□□□□ -0.64
EFEMP1-211ENST00000480016 GPHNQ9NQX3 736 aaPredicted RBP11.03□□□□□ -0.64
EFEMP1-211ENST00000480016 USP34Q70CQ2 3546 aa11.03□□□□□ -0.64
EFEMP1-211ENST00000480016 CFAP47Q6ZTR5 3102 aa11.02□□□□□ -0.65
EFEMP1-211ENST00000480016 ZNF316A6NFI3 1004 aaPredicted RBP11.02□□□□□ -0.65
EFEMP1-211ENST00000480016 PRKCSHP14314 528 aaPredicted RBP11.02□□□□□ -0.65
EFEMP1-211ENST00000480016 IL13P35225 146 aa11.02□□□□□ -0.65
EFEMP1-211ENST00000480016 FKBP1BP68106 108 aa11.02□□□□□ -0.65
EFEMP1-211ENST00000480016 FOXK1P85037 733 aa11.02□□□□□ -0.65
EFEMP1-211ENST00000480016 SP3Q02447 781 aa11.02□□□□□ -0.65
EFEMP1-211ENST00000480016 SPRYD3Q8NCJ5 442 aa11.02□□□□□ -0.65
EFEMP1-211ENST00000480016 FBXL18Q96ME1 805 aa11.02□□□□□ -0.65
EFEMP1-211ENST00000480016 PHOX2BQ99453 314 aa11.02□□□□□ -0.65
EFEMP1-211ENST00000480016 CNOT7Q9UIV1 285 aaKnown RBP11.02□□□□□ -0.65
EFEMP1-211ENST00000480016 PCDHGA4Q9Y5G9 962 aa11.02□□□□□ -0.65
EFEMP1-211ENST00000480016 ZNF646O15015 1829 aaPredicted RBP11.02□□□□□ -0.65
EFEMP1-211ENST00000480016 NPC1L1Q9UHC9 1359 aa11.02□□□□□ -0.65
EFEMP1-211ENST00000480016 TCF20Q9UGU0 1960 aaKnown RBP11.01□□□□□ -0.65
EFEMP1-211ENST00000480016 UBE2Q2LH0YL09 131 aa11.01□□□□□ -0.65
EFEMP1-211ENST00000480016 SYN1P17600 705 aa11.01□□□□□ -0.65
EFEMP1-211ENST00000480016 AEBP1Q8IUX7 1158 aa11.01□□□□□ -0.65
EFEMP1-211ENST00000480016 NFATC2IPQ8NCF5 419 aa11.01□□□□□ -0.65
EFEMP1-211ENST00000480016 CDCA5Q96FF9 252 aa11.01□□□□□ -0.65
EFEMP1-211ENST00000480016 SOS1Q07889 1333 aaPredicted RBP11.01□□□□□ -0.65
EFEMP1-211ENST00000480016 GPR179Q6PRD1 2367 aa11.01□□□□□ -0.65
EFEMP1-211ENST00000480016 DIAPH1O60610 1272 aaKnown RBP11□□□□□ -0.65
EFEMP1-211ENST00000480016 PTCD1O75127 700 aaKnown RBP11□□□□□ -0.65
EFEMP1-211ENST00000480016 ACAP1Q15027 740 aa11□□□□□ -0.65
EFEMP1-211ENST00000480016 DCPSQ96C86 337 aaKnown RBP11□□□□□ -0.65
EFEMP1-211ENST00000480016 TPRP12270 2363 aaKnown RBP11□□□□□ -0.65
EFEMP1-211ENST00000480016 C5orf42Q9H799 3197 aa11□□□□□ -0.65
EFEMP1-211ENST00000480016 CDHR2Q9BYE9 1310 aa11□□□□□ -0.65
EFEMP1-211ENST00000480016 GTPBP6O43824 516 aaPredicted RBP10.99□□□□□ -0.65
EFEMP1-211ENST00000480016 NUDT7P0C024 238 aa10.99□□□□□ -0.65
EFEMP1-211ENST00000480016 CC2D1BQ5T0F9 858 aaKnown RBP10.99□□□□□ -0.65
EFEMP1-211ENST00000480016 PLPP6Q8IY26 295 aa10.99□□□□□ -0.65
EFEMP1-211ENST00000480016 C7orf61Q8IZ16 206 aa10.99□□□□□ -0.65
EFEMP1-211ENST00000480016 WDFY4Q6ZS81 3184 aa10.99□□□□□ -0.65
EFEMP1-211ENST00000480016 EGFRP00533 1210 aa10.98□□□□□ -0.65
EFEMP1-211ENST00000480016 BMP1P13497 986 aa10.98□□□□□ -0.65
EFEMP1-211ENST00000480016 TBC1D9BQ66K14 1250 aa10.98□□□□□ -0.65
EFEMP1-211ENST00000480016 NIM1KQ8IY84 436 aa10.98□□□□□ -0.65
EFEMP1-211ENST00000480016 THEGQ9P2T0 379 aa10.98□□□□□ -0.65
EFEMP1-211ENST00000480016 H7C1D1 291 aa10.97□□□□□ -0.65
EFEMP1-211ENST00000480016 PER1O15534 1290 aaPredicted RBP10.97□□□□□ -0.65
EFEMP1-211ENST00000480016 HMOX1P09601 288 aa10.97□□□□□ -0.65
EFEMP1-211ENST00000480016 NPR1P16066 1061 aa10.97□□□□□ -0.65
EFEMP1-211ENST00000480016 CRHR2Q13324 411 aa10.97□□□□□ -0.65
EFEMP1-211ENST00000480016 DSG2Q14126 1118 aa10.97□□□□□ -0.65
EFEMP1-211ENST00000480016 VSIG10Q8N0Z9 540 aa10.97□□□□□ -0.65
EFEMP1-211ENST00000480016 PTCD2Q8WV60 388 aaKnown RBP10.97□□□□□ -0.65
EFEMP1-211ENST00000480016 BCL2L13Q9BXK5 485 aa10.97□□□□□ -0.65
EFEMP1-211ENST00000480016 SLC52A2Q9HAB3 445 aa10.97□□□□□ -0.65
EFEMP1-211ENST00000480016 DCHS1Q96JQ0 3298 aa10.96□□□□□ -0.65
EFEMP1-211ENST00000480016 SSC5DA1L4H1 1573 aa10.96□□□□□ -0.65
EFEMP1-211ENST00000480016 IGF2BP3O00425 579 aaKnown RBP eCLIP10.96□□□□□ -0.65
EFEMP1-211ENST00000480016 U2AF1L4Q8WU68 220 aaKnown RBP10.96□□□□□ -0.65
EFEMP1-211ENST00000480016 CFAP53Q96M91 514 aa10.96□□□□□ -0.65
EFEMP1-211ENST00000480016 ZNF318Q5VUA4 2279 aa10.95□□□□□ -0.66
EFEMP1-211ENST00000480016 KLRG2A4D1S0 409 aaPredicted RBP10.95□□□□□ -0.66
EFEMP1-211ENST00000480016 U2SURPO15042 1029 aaKnown RBP10.95□□□□□ -0.66
EFEMP1-211ENST00000480016 RNMTO43148 476 aaKnown RBP10.95□□□□□ -0.66
EFEMP1-211ENST00000480016 CCL5P13501 91 aa10.95□□□□□ -0.66
EFEMP1-211ENST00000480016 INHBEP58166 350 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms