RNA–Protein interactions for RNA: ENST00000479988.1

CPS1-207, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 1 (best)

Gene CPS1, Length 4,811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-207ENST00000479988 CCDC69A6NI79 296 aa7.02□□□□□ -1.29
CPS1-207ENST00000479988 TRAK2O60296 914 aa7.02□□□□□ -1.29
CPS1-207ENST00000479988 SEC24BO95487 1268 aa7.02□□□□□ -1.29
CPS1-207ENST00000479988 IMMTQ16891 758 aaKnown RBP7.02□□□□□ -1.29
CPS1-207ENST00000479988 DOK7Q18PE1 504 aa7.02□□□□□ -1.29
CPS1-207ENST00000479988 TTLL5Q6EMB2 1281 aa7.02□□□□□ -1.29
CPS1-207ENST00000479988 ZBTB38Q8NAP3 1195 aaPredicted RBP7.02□□□□□ -1.29
CPS1-207ENST00000479988 UPF1Q92900 1129 aaKnown RBP eCLIP7.02□□□□□ -1.29
CPS1-207ENST00000479988 SHPRHQ149N8 1683 aa7.02□□□□□ -1.29
CPS1-207ENST00000479988 ECM2O94769 699 aaPredicted RBP7.02□□□□□ -1.29
CPS1-207ENST00000479988 PDE1AP54750 535 aa7.02□□□□□ -1.29
CPS1-207ENST00000479988 BBXQ8WY36 941 aaPredicted RBP7.02□□□□□ -1.29
CPS1-207ENST00000479988 PHAXQ9H814 394 aaKnown RBP7.02□□□□□ -1.29
CPS1-207ENST00000479988 DDX49Q9Y6V7 483 aaKnown RBP7.02□□□□□ -1.29
CPS1-207ENST00000479988 RANBP6O60518 1105 aaKnown RBP7.02□□□□□ -1.29
CPS1-207ENST00000479988 PCCAP05165 728 aaPredicted RBP7.02□□□□□ -1.29
CPS1-207ENST00000479988 TMEM87AQ8NBN3 555 aa7.02□□□□□ -1.29
CPS1-207ENST00000479988 JAG2Q9Y219 1238 aa7.02□□□□□ -1.29
CPS1-207ENST00000479988 LEMD3Q9Y2U8 911 aa7.02□□□□□ -1.29
CPS1-207ENST00000479988 ITSN1Q15811 1721 aa7.01□□□□□ -1.29
CPS1-207ENST00000479988 RAD17O75943 681 aa7.01□□□□□ -1.29
CPS1-207ENST00000479988 MRE11P49959 708 aa7.01□□□□□ -1.29
CPS1-207ENST00000479988 NEK4P51957 841 aa7.01□□□□□ -1.29
CPS1-207ENST00000479988 CTSWP56202 376 aa7.01□□□□□ -1.29
CPS1-207ENST00000479988 KRT24Q2M2I5 525 aa7.01□□□□□ -1.29
CPS1-207ENST00000479988 TRIM22Q8IYM9 498 aa7.01□□□□□ -1.29
CPS1-207ENST00000479988 TTF2Q9UNY4 1162 aaKnown RBP7.01□□□□□ -1.29
CPS1-207ENST00000479988 ZNF76P36508 570 aa7.01□□□□□ -1.29
CPS1-207ENST00000479988 TGFB2P61812 414 aa7.01□□□□□ -1.29
CPS1-207ENST00000479988 IRX3P78415 501 aaPredicted RBP7.01□□□□□ -1.29
CPS1-207ENST00000479988 MFSD14BQ5SR56 506 aa7.01□□□□□ -1.29
CPS1-207ENST00000479988 KIAA0825Q8IV33 1275 aa7.01□□□□□ -1.29
CPS1-207ENST00000479988 TEX11Q8IYF3 940 aa7.01□□□□□ -1.29
CPS1-207ENST00000479988 NUP133Q8WUM0 1156 aa7.01□□□□□ -1.29
CPS1-207ENST00000479988 CUL5Q93034 780 aa7.01□□□□□ -1.29
CPS1-207ENST00000479988 SEC63Q9UGP8 760 aaKnown RBP7.01□□□□□ -1.29
CPS1-207ENST00000479988 CD2APQ9Y5K6 639 aa7.01□□□□□ -1.29
CPS1-207ENST00000479988 MROH5Q6ZUA9 1318 aa7.01□□□□□ -1.29
CPS1-207ENST00000479988 KCNQ3O43525 872 aa7.01□□□□□ -1.29
CPS1-207ENST00000479988 SDSP20132 328 aa7.01□□□□□ -1.29
CPS1-207ENST00000479988 NFIXQ14938 502 aa7.01□□□□□ -1.29
CPS1-207ENST00000479988 KRI1Q8N9T8 703 aaKnown RBP7.01□□□□□ -1.29
CPS1-207ENST00000479988 EHMT1Q9H9B1 1298 aa7.01□□□□□ -1.29
CPS1-207ENST00000479988 KNDC1Q76NI1 1749 aa7.01□□□□□ -1.29
CPS1-207ENST00000479988 TSPY2A6NKD2 308 aa7.01□□□□□ -1.29
CPS1-207ENST00000479988 EYA2O00167 538 aa7.01□□□□□ -1.29
CPS1-207ENST00000479988 GOLIM4O00461 696 aa7.01□□□□□ -1.29
CPS1-207ENST00000479988 ZFYP08048 801 aaPredicted RBP7.01□□□□□ -1.29
CPS1-207ENST00000479988 PLS1Q14651 629 aa7.01□□□□□ -1.29
CPS1-207ENST00000479988 CCDC47Q96A33 483 aaKnown RBP7.01□□□□□ -1.29
CPS1-207ENST00000479988 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.01□□□□□ -1.29
CPS1-207ENST00000479988 GRAPQ13588 217 aa7□□□□□ -1.29
CPS1-207ENST00000479988 GRAPLQ8TC17 118 aaPredicted RBP7□□□□□ -1.29
CPS1-207ENST00000479988 MAP2P11137 1827 aaKnown RBP7□□□□□ -1.29
CPS1-207ENST00000479988 MBD3O95983 291 aa7□□□□□ -1.29
CPS1-207ENST00000479988 MCTP1Q6DN14 999 aa7□□□□□ -1.29
CPS1-207ENST00000479988 PNMA8AQ86V59 439 aaPredicted RBP7□□□□□ -1.29
CPS1-207ENST00000479988 OSBPL3Q9H4L5 887 aa7□□□□□ -1.29
CPS1-207ENST00000479988 AS3MTQ9HBK9 375 aa7□□□□□ -1.29
CPS1-207ENST00000479988 SLC5A4Q9NY91 659 aa7□□□□□ -1.29
CPS1-207ENST00000479988 LMNB1P20700 586 aa7□□□□□ -1.29
CPS1-207ENST00000479988 ECE1P42892 770 aa7□□□□□ -1.29
CPS1-207ENST00000479988 GCKRQ14397 625 aa7□□□□□ -1.29
CPS1-207ENST00000479988 FHDC1Q9C0D6 1143 aaPredicted RBP7□□□□□ -1.29
CPS1-207ENST00000479988 GZF1Q9H116 711 aaPredicted RBP7□□□□□ -1.29
CPS1-207ENST00000479988 ECHDC1Q9NTX5 307 aa7□□□□□ -1.29
CPS1-207ENST00000479988 HACL1Q9UJ83 578 aa7□□□□□ -1.29
CPS1-207ENST00000479988 CYP19A1P11511 503 aaPredicted RBP6.99□□□□□ -1.29
CPS1-207ENST00000479988 IREB2P48200 963 aaKnown RBP6.99□□□□□ -1.29
CPS1-207ENST00000479988 BRDTQ58F21 947 aaPredicted RBP6.99□□□□□ -1.29
CPS1-207ENST00000479988 SYNE4Q8N205 404 aa6.99□□□□□ -1.29
CPS1-207ENST00000479988 CTCFLQ8NI51 663 aaPredicted RBP6.99□□□□□ -1.29
CPS1-207ENST00000479988 RHPN1Q8TCX5 695 aa6.99□□□□□ -1.29
CPS1-207ENST00000479988 LPIN2Q92539 896 aa6.99□□□□□ -1.29
CPS1-207ENST00000479988 DBNDD1Q9H9R9 158 aa6.99□□□□□ -1.29
CPS1-207ENST00000479988 U3KPZ7 1027 aaPredicted RBP6.99□□□□□ -1.29
CPS1-207ENST00000479988 TTC41PQ6P2S7 1318 aa6.99□□□□□ -1.29
CPS1-207ENST00000479988 MYO3BQ8WXR4 1341 aa6.99□□□□□ -1.29
CPS1-207ENST00000479988 SMARCA5O60264 1052 aaPredicted RBP6.99□□□□□ -1.29
CPS1-207ENST00000479988 VEGFAP15692 232 aaPredicted RBP6.99□□□□□ -1.29
CPS1-207ENST00000479988 CHRNA5P30532 468 aa6.99□□□□□ -1.29
CPS1-207ENST00000479988 CCDC178Q5BJE1 867 aa6.99□□□□□ -1.29
CPS1-207ENST00000479988 G2E3Q7L622 706 aa6.99□□□□□ -1.29
CPS1-207ENST00000479988 PSMD1Q99460 953 aa6.99□□□□□ -1.29
CPS1-207ENST00000479988 CNTNAP4Q9C0A0 1308 aa6.99□□□□□ -1.29
CPS1-207ENST00000479988 DPEP1P16444 411 aa6.99□□□□□ -1.29
CPS1-207ENST00000479988 SLC10A4Q96EP9 437 aa6.99□□□□□ -1.29
CPS1-207ENST00000479988 ZSCAN31Q96LW9 406 aaPredicted RBP6.99□□□□□ -1.29
CPS1-207ENST00000479988 SCLT1Q96NL6 688 aa6.99□□□□□ -1.29
CPS1-207ENST00000479988 STX8Q9UNK0 236 aa6.99□□□□□ -1.29
CPS1-207ENST00000479988 ZNF804BA4D1E1 1349 aa6.98□□□□□ -1.29
CPS1-207ENST00000479988 MAGEB6P1A0A0J9YX57 407 aa6.98□□□□□ -1.29
CPS1-207ENST00000479988 ANKRD1Q15327 319 aa6.98□□□□□ -1.29
CPS1-207ENST00000479988 C9orf131Q5VYM1 1079 aa6.98□□□□□ -1.29
CPS1-207ENST00000479988 PRPF40BQ6NWY9 871 aaKnown RBP6.98□□□□□ -1.29
CPS1-207ENST00000479988 COL23A1Q86Y22 540 aaPredicted RBP6.98□□□□□ -1.29
CPS1-207ENST00000479988 USP17L8P0C7I0 530 aa6.98□□□□□ -1.29
CPS1-207ENST00000479988 FOXD4L5Q5VV16 416 aaPredicted RBP6.98□□□□□ -1.29
CPS1-207ENST00000479988 FOXD4L4Q8WXT5 416 aaPredicted RBP6.98□□□□□ -1.29
CPS1-207ENST00000479988 ZNF592Q92610 1267 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms