RNA–Protein interactions for RNA: ENST00000479511.1

GAPVD1-217, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 575 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-217ENST00000479511 IGBP1P78318 339 aa10.53□□□□□ -0.72
GAPVD1-217ENST00000479511 COL9A2Q14055 689 aaPredicted RBP10.53□□□□□ -0.72
GAPVD1-217ENST00000479511 RUBCNLQ9H714 662 aa10.53□□□□□ -0.72
GAPVD1-217ENST00000479511 KANSL2Q9H9L4 492 aa10.53□□□□□ -0.72
GAPVD1-217ENST00000479511 GPAMQ9HCL2 828 aa10.53□□□□□ -0.72
GAPVD1-217ENST00000479511 PRKAG3Q9UGI9 489 aa10.53□□□□□ -0.72
GAPVD1-217ENST00000479511 MARCH6O60337 910 aa10.52□□□□□ -0.73
GAPVD1-217ENST00000479511 CLSTN1O94985 981 aa10.52□□□□□ -0.73
GAPVD1-217ENST00000479511 RLBP1P12271 317 aa10.52□□□□□ -0.73
GAPVD1-217ENST00000479511 CAMK2GQ13555 558 aaPredicted RBP10.52□□□□□ -0.73
GAPVD1-217ENST00000479511 COL13A1Q5TAT6 717 aaPredicted RBP10.52□□□□□ -0.73
GAPVD1-217ENST00000479511 CCNJLQ8IV13 435 aa10.52□□□□□ -0.73
GAPVD1-217ENST00000479511 GOLM1Q8NBJ4 401 aa10.52□□□□□ -0.73
GAPVD1-217ENST00000479511 MICAL1Q8TDZ2 1067 aa10.52□□□□□ -0.73
GAPVD1-217ENST00000479511 CPLX3Q8WVH0 158 aa10.52□□□□□ -0.73
GAPVD1-217ENST00000479511 SHDQ96IW2 340 aa10.52□□□□□ -0.73
GAPVD1-217ENST00000479511 ZKSCAN3Q9BRR0 538 aa10.52□□□□□ -0.73
GAPVD1-217ENST00000479511 CRISPLD1Q9H336 500 aa10.52□□□□□ -0.73
GAPVD1-217ENST00000479511 TRPA1O75762 1119 aa10.51□□□□□ -0.73
GAPVD1-217ENST00000479511 LMNB2Q03252 620 aa10.51□□□□□ -0.73
GAPVD1-217ENST00000479511 SNAP47Q5SQN1 464 aa10.51□□□□□ -0.73
GAPVD1-217ENST00000479511 C6orf118Q5T5N4 469 aa10.51□□□□□ -0.73
GAPVD1-217ENST00000479511 CCDC81Q6ZN84 652 aa10.51□□□□□ -0.73
GAPVD1-217ENST00000479511 SRRTQ9BXP5 876 aaKnown RBP10.51□□□□□ -0.73
GAPVD1-217ENST00000479511 ZFATQ9P243 1243 aa10.51□□□□□ -0.73
GAPVD1-217ENST00000479511 PHF20L1A8MW92 1017 aa10.5□□□□□ -0.73
GAPVD1-217ENST00000479511 U2SURPO15042 1029 aaKnown RBP10.5□□□□□ -0.73
GAPVD1-217ENST00000479511 SMAD7O15105 426 aaKnown RBP10.5□□□□□ -0.73
GAPVD1-217ENST00000479511 BMP2P12643 396 aa10.5□□□□□ -0.73
GAPVD1-217ENST00000479511 TFE3P19532 575 aaPredicted RBP10.5□□□□□ -0.73
GAPVD1-217ENST00000479511 GRIA4P48058 902 aa10.5□□□□□ -0.73
GAPVD1-217ENST00000479511 KCNQ4P56696 695 aa10.5□□□□□ -0.73
GAPVD1-217ENST00000479511 APOBRQ0VD83 1088 aa10.5□□□□□ -0.73
GAPVD1-217ENST00000479511 SFSWAPQ12872 951 aaKnown RBP10.5□□□□□ -0.73
GAPVD1-217ENST00000479511 SAMD5Q5TGI4 173 aa10.5□□□□□ -0.73
GAPVD1-217ENST00000479511 FAM169BQ8N8A8 192 aa10.5□□□□□ -0.73
GAPVD1-217ENST00000479511 NKD1Q969G9 470 aa10.5□□□□□ -0.73
GAPVD1-217ENST00000479511 GSX2Q9BZM3 304 aa10.5□□□□□ -0.73
GAPVD1-217ENST00000479511 IFT57Q9NWB7 429 aa10.5□□□□□ -0.73
GAPVD1-217ENST00000479511 PPT2Q9UMR5 302 aa10.5□□□□□ -0.73
GAPVD1-217ENST00000479511 KCNH4Q9UQ05 1017 aa10.5□□□□□ -0.73
GAPVD1-217ENST00000479511 CUX2O14529 1486 aa10.49□□□□□ -0.73
GAPVD1-217ENST00000479511 CCDC85CA6NKD9 419 aa10.49□□□□□ -0.73
GAPVD1-217ENST00000479511 ENC1O14682 589 aa10.49□□□□□ -0.73
GAPVD1-217ENST00000479511 CAPN5O15484 640 aaPredicted RBP10.49□□□□□ -0.73
GAPVD1-217ENST00000479511 UPP2O95045 317 aa10.49□□□□□ -0.73
GAPVD1-217ENST00000479511 CCINQ13939 588 aa10.49□□□□□ -0.73
GAPVD1-217ENST00000479511 SPRED3Q2MJR0 410 aa10.49□□□□□ -0.73
GAPVD1-217ENST00000479511 PLEKHG4Q58EX7 1191 aa10.49□□□□□ -0.73
GAPVD1-217ENST00000479511 RNF187Q5TA31 235 aaPredicted RBP10.49□□□□□ -0.73
GAPVD1-217ENST00000479511 SLITRK4Q8IW52 837 aa10.49□□□□□ -0.73
GAPVD1-217ENST00000479511 CELF2-AS1Q8N7Q2 184 aa10.49□□□□□ -0.73
GAPVD1-217ENST00000479511 OSMRQ99650 979 aa10.49□□□□□ -0.73
GAPVD1-217ENST00000479511 BRINP2Q9C0B6 783 aa10.49□□□□□ -0.73
GAPVD1-217ENST00000479511 COL4A3BPQ9Y5P4 624 aa10.49□□□□□ -0.73
GAPVD1-217ENST00000479511 METTL12A8MUP2 240 aa10.48□□□□□ -0.73
GAPVD1-217ENST00000479511 AGMOQ6ZNB7 445 aa10.48□□□□□ -0.73
GAPVD1-217ENST00000479511 FAM196AQ6ZSG2 479 aa10.48□□□□□ -0.73
GAPVD1-217ENST00000479511 FILIP1Q7Z7B0 1213 aa10.48□□□□□ -0.73
GAPVD1-217ENST00000479511 FBXO27Q8NI29 283 aa10.48□□□□□ -0.73
GAPVD1-217ENST00000479511 DZANK1Q9NVP4 752 aa10.48□□□□□ -0.73
GAPVD1-217ENST00000479511 NOP58Q9Y2X3 529 aaKnown RBP10.48□□□□□ -0.73
GAPVD1-217ENST00000479511 PAGE1O75459 146 aa10.47□□□□□ -0.73
GAPVD1-217ENST00000479511 GRIN2CQ14957 1233 aa10.47□□□□□ -0.73
GAPVD1-217ENST00000479511 SEZ6Q53EL9 994 aa10.47□□□□□ -0.73
GAPVD1-217ENST00000479511 TTBK2Q6IQ55 1244 aa10.47□□□□□ -0.73
GAPVD1-217ENST00000479511 NLRP8Q86W28 1048 aa10.47□□□□□ -0.73
GAPVD1-217ENST00000479511 LILRB2Q8N423 598 aa10.47□□□□□ -0.73
GAPVD1-217ENST00000479511 NECAB3Q96P71 396 aaPredicted RBP10.47□□□□□ -0.73
GAPVD1-217ENST00000479511 HHIPQ96QV1 700 aa10.47□□□□□ -0.73
GAPVD1-217ENST00000479511 MSRB2Q9Y3D2 182 aa10.47□□□□□ -0.73
GAPVD1-217ENST00000479511 FIGNL2A6NMB9 653 aa10.46□□□□□ -0.73
GAPVD1-217ENST00000479511 TLR3O15455 904 aaKnown RBP10.46□□□□□ -0.73
GAPVD1-217ENST00000479511 KIF4AO95239 1232 aa10.46□□□□□ -0.73
GAPVD1-217ENST00000479511 RARAP10276 462 aa10.46□□□□□ -0.73
GAPVD1-217ENST00000479511 IBSPP21815 317 aaPredicted RBP10.46□□□□□ -0.73
GAPVD1-217ENST00000479511 KANK3Q6NY19 840 aa10.46□□□□□ -0.73
GAPVD1-217ENST00000479511 BNC2Q6ZN30 1099 aaPredicted RBP10.46□□□□□ -0.73
GAPVD1-217ENST00000479511 LRP10Q7Z4F1 713 aa10.46□□□□□ -0.73
GAPVD1-217ENST00000479511 SH3TC2Q8TF17 1288 aa10.46□□□□□ -0.73
GAPVD1-217ENST00000479511 PLD4Q96BZ4 506 aa10.46□□□□□ -0.73
GAPVD1-217ENST00000479511 CEP44Q9C0F1 390 aa10.46□□□□□ -0.73
GAPVD1-217ENST00000479511 PCDH12Q9NPG4 1184 aa10.46□□□□□ -0.73
GAPVD1-217ENST00000479511 R3HCC1Q9Y3T6 440 aaKnown RBP10.46□□□□□ -0.73
GAPVD1-217ENST00000479511 TTLL8A6PVC2 850 aa10.45□□□□□ -0.74
GAPVD1-217ENST00000479511 F13A1P00488 732 aa10.45□□□□□ -0.74
GAPVD1-217ENST00000479511 ITPKAP23677 461 aa10.45□□□□□ -0.74
GAPVD1-217ENST00000479511 ANAPC15P60006 121 aa10.45□□□□□ -0.74
GAPVD1-217ENST00000479511 FAAP100Q0VG06 881 aa10.45□□□□□ -0.74
GAPVD1-217ENST00000479511 NCAPG2Q86XI2 1143 aa10.45□□□□□ -0.74
GAPVD1-217ENST00000479511 DNAJC7Q99615 494 aa10.45□□□□□ -0.74
GAPVD1-217ENST00000479511 SEC31BQ9NQW1 1179 aa10.45□□□□□ -0.74
GAPVD1-217ENST00000479511 FANCLQ9NW38 375 aa10.45□□□□□ -0.74
GAPVD1-217ENST00000479511 KLHL42Q9P2K6 505 aa10.45□□□□□ -0.74
GAPVD1-217ENST00000479511 EFSO43281 561 aa10.44□□□□□ -0.74
GAPVD1-217ENST00000479511 F11P03951 625 aa10.44□□□□□ -0.74
GAPVD1-217ENST00000479511 CHMP4BP1P59074 171 aa10.44□□□□□ -0.74
GAPVD1-217ENST00000479511 Q6ZNB5 142 aa10.44□□□□□ -0.74
GAPVD1-217ENST00000479511 TRIM67Q6ZTA4 783 aa10.44□□□□□ -0.74
GAPVD1-217ENST00000479511 CEP120Q8N960 986 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms