RNA–Protein interactions for RNA: ENST00000479413.1

C9orf85-205, Transcript of chromosome 9 open reading frame 85, humanhuman

TSL 1 (best)

Gene C9orf85, Length 902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85-205ENST00000479413 PAPPA2Q9BXP8 1791 aa18.26■□□□□ 0.51
C9orf85-205ENST00000479413 MYO3BQ8WXR4 1341 aa18.25■□□□□ 0.51
C9orf85-205ENST00000479413 AKAP11Q9UKA4 1901 aa18.25■□□□□ 0.51
C9orf85-205ENST00000479413 NEURL1BA8MQ27 555 aa18.25■□□□□ 0.51
C9orf85-205ENST00000479413 IGHMBP2P38935 993 aaKnown RBP18.25■□□□□ 0.51
C9orf85-205ENST00000479413 RGS19P49795 217 aa18.25■□□□□ 0.51
C9orf85-205ENST00000479413 CCT4P50991 539 aaKnown RBP18.25■□□□□ 0.51
C9orf85-205ENST00000479413 CCDC27Q2M243 656 aa18.25■□□□□ 0.51
C9orf85-205ENST00000479413 UBE3BQ7Z3V4 1068 aa18.25■□□□□ 0.51
C9orf85-205ENST00000479413 RNF186Q9NXI6 227 aa18.25■□□□□ 0.51
C9orf85-205ENST00000479413 TRPA1O75762 1119 aa18.24■□□□□ 0.51
C9orf85-205ENST00000479413 SLC4A2P04920 1241 aa18.24■□□□□ 0.51
C9orf85-205ENST00000479413 FBXW7Q969H0 707 aa18.24■□□□□ 0.51
C9orf85-205ENST00000479413 COA1Q9GZY4 146 aa18.24■□□□□ 0.51
C9orf85-205ENST00000479413 RASAL3Q86YV0 1011 aa18.23■□□□□ 0.51
C9orf85-205ENST00000479413 WWC1Q8IX03 1113 aa18.23■□□□□ 0.51
C9orf85-205ENST00000479413 MYH16Q9H6N6 1097 aa18.23■□□□□ 0.51
C9orf85-205ENST00000479413 LEMD3Q9Y2U8 911 aa18.23■□□□□ 0.51
C9orf85-205ENST00000479413 WTIPA6NIX2 430 aaPredicted RBP18.22■□□□□ 0.51
C9orf85-205ENST00000479413 H7C1W4 665 aa18.22■□□□□ 0.51
C9orf85-205ENST00000479413 MMP14P50281 582 aa18.22■□□□□ 0.51
C9orf85-205ENST00000479413 DACT2Q5SW24 774 aa18.22■□□□□ 0.51
C9orf85-205ENST00000479413 STRIP1Q5VSL9 837 aa18.22■□□□□ 0.51
C9orf85-205ENST00000479413 CSRNP1Q96S65 589 aa18.22■□□□□ 0.51
C9orf85-205ENST00000479413 MPHOSPH8Q99549 860 aa18.22■□□□□ 0.51
C9orf85-205ENST00000479413 ANKRD2Q9GZV1 360 aa18.22■□□□□ 0.51
C9orf85-205ENST00000479413 IL16Q14005 1332 aa18.22■□□□□ 0.51
C9orf85-205ENST00000479413 ITGA6P23229 1130 aa18.21■□□□□ 0.51
C9orf85-205ENST00000479413 NF2P35240 595 aa18.21■□□□□ 0.51
C9orf85-205ENST00000479413 GCKRQ14397 625 aa18.21■□□□□ 0.51
C9orf85-205ENST00000479413 NBPF9Q3BBW0 867 aa18.21■□□□□ 0.51
C9orf85-205ENST00000479413 G2E3Q7L622 706 aa18.21■□□□□ 0.51
C9orf85-205ENST00000479413 KCNJ4P48050 445 aa18.2■□□□□ 0.5
C9orf85-205ENST00000479413 FLIIQ13045 1269 aa18.2■□□□□ 0.5
C9orf85-205ENST00000479413 FKBP5Q13451 457 aaPredicted RBP18.2■□□□□ 0.5
C9orf85-205ENST00000479413 TTLL12Q14166 644 aaPredicted RBP18.2■□□□□ 0.5
C9orf85-205ENST00000479413 PLA2G12BQ9BX93 195 aa18.2■□□□□ 0.5
C9orf85-205ENST00000479413 ZNF804BA4D1E1 1349 aa18.2■□□□□ 0.5
C9orf85-205ENST00000479413 LINS1Q8NG48 757 aa18.19■□□□□ 0.5
C9orf85-205ENST00000479413 DNAAF4Q8WXU2 420 aa18.19■□□□□ 0.5
C9orf85-205ENST00000479413 MXD3Q9BW11 206 aa18.19■□□□□ 0.5
C9orf85-205ENST00000479413 HDAC9Q9UKV0 1011 aa18.19■□□□□ 0.5
C9orf85-205ENST00000479413 SCAF8Q9UPN6 1271 aaKnown RBP18.19■□□□□ 0.5
C9orf85-205ENST00000479413 ZNF646O15015 1829 aaPredicted RBP18.19■□□□□ 0.5
C9orf85-205ENST00000479413 WNT10BO00744 389 aa18.18■□□□□ 0.5
C9orf85-205ENST00000479413 NCBP3Q53F19 620 aaKnown RBP18.18■□□□□ 0.5
C9orf85-205ENST00000479413 TTLL5Q6EMB2 1281 aa18.18■□□□□ 0.5
C9orf85-205ENST00000479413 CACNA1FO60840 1977 aa18.17■□□□□ 0.5
C9orf85-205ENST00000479413 UBE2Q2LH0YL09 131 aa18.17■□□□□ 0.5
C9orf85-205ENST00000479413 SASH1O94885 1247 aa18.17■□□□□ 0.5
C9orf85-205ENST00000479413 CCDC184Q52MB2 194 aa18.17■□□□□ 0.5
C9orf85-205ENST00000479413 PRAMEF18Q5VWM3 479 aa18.17■□□□□ 0.5
C9orf85-205ENST00000479413 MOB2Q70IA6 237 aa18.17■□□□□ 0.5
C9orf85-205ENST00000479413 CTU1Q7Z7A3 348 aaKnown RBP18.17■□□□□ 0.5
C9orf85-205ENST00000479413 TXNRD3Q86VQ6 643 aa18.17■□□□□ 0.5
C9orf85-205ENST00000479413 APOBEC3FQ8IUX4 373 aaKnown RBP18.17■□□□□ 0.5
C9orf85-205ENST00000479413 FANCIQ9NVI1 1328 aa18.17■□□□□ 0.5
C9orf85-205ENST00000479413 ANKRD18BA2A2Z9 1011 aa18.16■□□□□ 0.5
C9orf85-205ENST00000479413 CSF1RP07333 972 aa18.16■□□□□ 0.5
C9orf85-205ENST00000479413 KLRK1P26718 216 aa18.16■□□□□ 0.5
C9orf85-205ENST00000479413 KIAA0825Q8IV33 1275 aa18.16■□□□□ 0.5
C9orf85-205ENST00000479413 CASP7P55210 303 aa18.15■□□□□ 0.5
C9orf85-205ENST00000479413 GTF2IP78347 998 aa18.15■□□□□ 0.5
C9orf85-205ENST00000479413 CHRNDQ07001 517 aa18.15■□□□□ 0.5
C9orf85-205ENST00000479413 ARMC9Q7Z3E5 817 aa18.14■□□□□ 0.49
C9orf85-205ENST00000479413 MRS2Q9HD23 443 aa18.14■□□□□ 0.49
C9orf85-205ENST00000479413 IFIT5Q13325 482 aaKnown RBP18.13■□□□□ 0.49
C9orf85-205ENST00000479413 CD209Q9NNX6 404 aa18.13■□□□□ 0.49
C9orf85-205ENST00000479413 COL1A1P02452 1464 aaPredicted RBP18.13■□□□□ 0.49
C9orf85-205ENST00000479413 SREBF2Q12772 1141 aa18.12■□□□□ 0.49
C9orf85-205ENST00000479413 WDR63Q8IWG1 891 aa18.12■□□□□ 0.49
C9orf85-205ENST00000479413 CHMP3Q9Y3E7 222 aa18.12■□□□□ 0.49
C9orf85-205ENST00000479413 VAMP4O75379 141 aa18.11■□□□□ 0.49
C9orf85-205ENST00000479413 TM4SF4P48230 202 aa18.11■□□□□ 0.49
C9orf85-205ENST00000479413 SOX10P56693 466 aa18.11■□□□□ 0.49
C9orf85-205ENST00000479413 MKRN3Q13064 507 aaKnown RBP18.11■□□□□ 0.49
C9orf85-205ENST00000479413 PRKG1Q13976 671 aa18.11■□□□□ 0.49
C9orf85-205ENST00000479413 DLGAP5Q15398 846 aa18.11■□□□□ 0.49
C9orf85-205ENST00000479413 PKN2Q16513 984 aaKnown RBP18.11■□□□□ 0.49
C9orf85-205ENST00000479413 ZNF804AQ7Z570 1209 aa18.11■□□□□ 0.49
C9orf85-205ENST00000479413 MYO1BO43795 1136 aa18.1■□□□□ 0.49
C9orf85-205ENST00000479413 TAF5LO75529 589 aa18.1■□□□□ 0.49
C9orf85-205ENST00000479413 SLC34A2O95436 690 aa18.1■□□□□ 0.49
C9orf85-205ENST00000479413 TBC1D8O95759 1140 aa18.1■□□□□ 0.49
C9orf85-205ENST00000479413 PTPN12Q05209 780 aaKnown RBP18.1■□□□□ 0.49
C9orf85-205ENST00000479413 EXOSC9Q06265 439 aaKnown RBP18.1■□□□□ 0.49
C9orf85-205ENST00000479413 C15orf52Q6ZUT6 534 aaKnown RBP18.1■□□□□ 0.49
C9orf85-205ENST00000479413 ZBED3Q96IU2 234 aaPredicted RBP18.1■□□□□ 0.49
C9orf85-205ENST00000479413 SALL2Q9Y467 1007 aaPredicted RBP18.1■□□□□ 0.49
C9orf85-205ENST00000479413 FOXO4P98177 505 aa18.09■□□□□ 0.49
C9orf85-205ENST00000479413 CCDC57Q2TAC2 916 aa18.09■□□□□ 0.49
C9orf85-205ENST00000479413 TAF7LQ5H9L4 462 aa18.09■□□□□ 0.49
C9orf85-205ENST00000479413 HELBQ8NG08 1087 aaPredicted RBP18.09■□□□□ 0.49
C9orf85-205ENST00000479413 ZNF296Q8WUU4 475 aaPredicted RBP18.09■□□□□ 0.49
C9orf85-205ENST00000479413 DEFB129Q9H1M3 183 aa18.09■□□□□ 0.49
C9orf85-205ENST00000479413 ANGEL1Q9UNK9 670 aaKnown RBP18.09■□□□□ 0.49
C9orf85-205ENST00000479413 A0A1B0GUL6 1792 aa18.09■□□□□ 0.49
C9orf85-205ENST00000479413 F6X3S4 739 aa18.08■□□□□ 0.48
C9orf85-205ENST00000479413 NOM1Q5C9Z4 860 aaKnown RBP18.08■□□□□ 0.48
C9orf85-205ENST00000479413 BEND3Q5T5X7 828 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms