RNA–Protein interactions for RNA: ENST00000479397.2

CNOT10-215, Transcript of CCR4-NOT transcription complex subunit 10, humanhuman

TSL 5

Gene CNOT10, Length 474 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT10-215ENST00000479397 SLC10A5Q5PT55 438 aa7.26□□□□□ -1.25
CNOT10-215ENST00000479397 GIGYF2Q6Y7W6 1299 aaKnown RBP7.26□□□□□ -1.25
CNOT10-215ENST00000479397 MOB2Q70IA6 237 aa7.26□□□□□ -1.25
CNOT10-215ENST00000479397 ZNF34Q8IZ26 560 aa7.26□□□□□ -1.25
CNOT10-215ENST00000479397 GRAPLQ8TC17 118 aaPredicted RBP7.26□□□□□ -1.25
CNOT10-215ENST00000479397 RTF1Q92541 710 aaKnown RBP7.26□□□□□ -1.25
CNOT10-215ENST00000479397 ZNF333Q96JL9 665 aa7.26□□□□□ -1.25
CNOT10-215ENST00000479397 EYA3Q99504 573 aa7.26□□□□□ -1.25
CNOT10-215ENST00000479397 UTP14AQ9BVJ6 771 aaKnown RBP7.26□□□□□ -1.25
CNOT10-215ENST00000479397 R3HDMLQ9H3Y0 253 aa7.26□□□□□ -1.25
CNOT10-215ENST00000479397 ZBTB3Q9H5J0 574 aa7.26□□□□□ -1.25
CNOT10-215ENST00000479397 EFCC1Q9HA90 598 aa7.26□□□□□ -1.25
CNOT10-215ENST00000479397 SPEF2Q9C093 1822 aa7.26□□□□□ -1.25
CNOT10-215ENST00000479397 OTOFQ9HC10 1997 aa7.26□□□□□ -1.25
CNOT10-215ENST00000479397 MGAMO43451 1857 aa7.26□□□□□ -1.25
CNOT10-215ENST00000479397 ASTN2O75129 1339 aaPredicted RBP7.26□□□□□ -1.25
CNOT10-215ENST00000479397 MYH3P11055 1940 aa7.25□□□□□ -1.25
CNOT10-215ENST00000479397 EYSQ5T1H1 3165 aa7.25□□□□□ -1.25
CNOT10-215ENST00000479397 RTL9Q8NET4 1388 aa7.25□□□□□ -1.25
CNOT10-215ENST00000479397 A0A1W2PPC1 479 aa7.25□□□□□ -1.25
CNOT10-215ENST00000479397 G3V3G9 751 aa7.25□□□□□ -1.25
CNOT10-215ENST00000479397 C6orf229H3BNL8 230 aa7.25□□□□□ -1.25
CNOT10-215ENST00000479397 VIL1P09327 827 aaKnown RBP7.25□□□□□ -1.25
CNOT10-215ENST00000479397 ZNF280AP59817 542 aaPredicted RBP7.25□□□□□ -1.25
CNOT10-215ENST00000479397 OTUD7BQ6GQQ9 843 aa7.25□□□□□ -1.25
CNOT10-215ENST00000479397 ARMC9Q7Z3E5 817 aa7.25□□□□□ -1.25
CNOT10-215ENST00000479397 AGBL3Q8NEM8 1001 aa7.25□□□□□ -1.25
CNOT10-215ENST00000479397 DPF3Q92784 378 aa7.25□□□□□ -1.25
CNOT10-215ENST00000479397 NSFL1CQ9UNZ2 370 aaKnown RBP7.25□□□□□ -1.25
CNOT10-215ENST00000479397 ALPK3Q96L96 1907 aa7.25□□□□□ -1.25
CNOT10-215ENST00000479397 ZSWIM8A7E2V4 1837 aa7.24□□□□□ -1.25
CNOT10-215ENST00000479397 PRUNE2Q8WUY3 3088 aa7.24□□□□□ -1.25
CNOT10-215ENST00000479397 RIMBP2O15034 1052 aa7.24□□□□□ -1.25
CNOT10-215ENST00000479397 U2SURPO15042 1029 aaKnown RBP7.24□□□□□ -1.25
CNOT10-215ENST00000479397 SP3Q02447 781 aa7.24□□□□□ -1.25
CNOT10-215ENST00000479397 SPRYD7Q5W111 196 aa7.24□□□□□ -1.25
CNOT10-215ENST00000479397 TTLL7Q6ZT98 887 aa7.24□□□□□ -1.25
CNOT10-215ENST00000479397 ANKRD13DQ6ZTN6 518 aa7.24□□□□□ -1.25
CNOT10-215ENST00000479397 CD99L2Q8TCZ2 262 aa7.24□□□□□ -1.25
CNOT10-215ENST00000479397 MYOZ2Q9NPC6 264 aa7.24□□□□□ -1.25
CNOT10-215ENST00000479397 RRP7AQ9Y3A4 280 aaKnown RBP7.24□□□□□ -1.25
CNOT10-215ENST00000479397 COL3A1P02461 1466 aaPredicted RBP7.24□□□□□ -1.25
CNOT10-215ENST00000479397 USP17L8P0C7I0 530 aa7.23□□□□□ -1.25
CNOT10-215ENST00000479397 ZBTB48P10074 688 aaPredicted RBP7.23□□□□□ -1.25
CNOT10-215ENST00000479397 MYL6BP14649 208 aa7.23□□□□□ -1.25
CNOT10-215ENST00000479397 DOK7Q18PE1 504 aa7.23□□□□□ -1.25
CNOT10-215ENST00000479397 HTATIP2Q9BUP3 242 aa7.23□□□□□ -1.25
CNOT10-215ENST00000479397 ZC3H12CQ9C0D7 883 aaKnown RBP7.23□□□□□ -1.25
CNOT10-215ENST00000479397 KCNQ5Q9NR82 932 aa7.23□□□□□ -1.25
CNOT10-215ENST00000479397 NR2E3Q9Y5X4 410 aa7.23□□□□□ -1.25
CNOT10-215ENST00000479397 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.22□□□□□ -1.25
CNOT10-215ENST00000479397 PTPN12Q05209 780 aaKnown RBP7.22□□□□□ -1.25
CNOT10-215ENST00000479397 HSP90AB3PQ58FF7 597 aa7.22□□□□□ -1.25
CNOT10-215ENST00000479397 PRAMEF18Q5VWM3 479 aa7.22□□□□□ -1.25
CNOT10-215ENST00000479397 GPR153Q6NV75 609 aa7.22□□□□□ -1.25
CNOT10-215ENST00000479397 RSBN1LQ6PCB5 846 aaPredicted RBP7.22□□□□□ -1.25
CNOT10-215ENST00000479397 MCM10Q7L590 875 aa7.22□□□□□ -1.25
CNOT10-215ENST00000479397 ZFP91Q96JP5 570 aaPredicted RBP7.22□□□□□ -1.25
CNOT10-215ENST00000479397 PRO3102Q9H379 93 aa7.22□□□□□ -1.25
CNOT10-215ENST00000479397 POLLQ9UGP5 575 aa7.22□□□□□ -1.25
CNOT10-215ENST00000479397 COL1A1P02452 1464 aaPredicted RBP7.22□□□□□ -1.25
CNOT10-215ENST00000479397 ERBB4Q15303 1308 aa7.22□□□□□ -1.25
CNOT10-215ENST00000479397 SH3TC1Q8TE82 1336 aa7.22□□□□□ -1.25
CNOT10-215ENST00000479397 IGF2BP3O00425 579 aaKnown RBP eCLIP7.21□□□□□ -1.26
CNOT10-215ENST00000479397 ECM2O94769 699 aaPredicted RBP7.21□□□□□ -1.26
CNOT10-215ENST00000479397 HCLS1P14317 486 aaPredicted RBP7.21□□□□□ -1.26
CNOT10-215ENST00000479397 PRKAR2BP31323 418 aa7.21□□□□□ -1.26
CNOT10-215ENST00000479397 CRHR2Q13324 411 aa7.21□□□□□ -1.26
CNOT10-215ENST00000479397 TAF7Q15545 349 aaPredicted RBP7.21□□□□□ -1.26
CNOT10-215ENST00000479397 AMER1Q5JTC6 1135 aaPredicted RBP7.21□□□□□ -1.26
CNOT10-215ENST00000479397 LDLRAD1Q5T700 205 aa7.21□□□□□ -1.26
CNOT10-215ENST00000479397 OGFOD1Q8N543 542 aa7.21□□□□□ -1.26
CNOT10-215ENST00000479397 NKX2-3Q8TAU0 364 aa7.21□□□□□ -1.26
CNOT10-215ENST00000479397 TBC1D16Q8TBP0 767 aa7.21□□□□□ -1.26
CNOT10-215ENST00000479397 SLC10A4Q96EP9 437 aa7.21□□□□□ -1.26
CNOT10-215ENST00000479397 COL25A1Q9BXS0 654 aaPredicted RBP7.21□□□□□ -1.26
CNOT10-215ENST00000479397 TRMT112Q9UI30 125 aaKnown RBP7.21□□□□□ -1.26
CNOT10-215ENST00000479397 ANGEL1Q9UNK9 670 aaKnown RBP7.21□□□□□ -1.26
CNOT10-215ENST00000479397 SCAF8Q9UPN6 1271 aaKnown RBP7.21□□□□□ -1.26
CNOT10-215ENST00000479397 COL4A1P02462 1669 aa7.2□□□□□ -1.26
CNOT10-215ENST00000479397 UNCXA6NJT0 531 aa7.2□□□□□ -1.26
CNOT10-215ENST00000479397 HTATSF1O43719 755 aaKnown RBP7.2□□□□□ -1.26
CNOT10-215ENST00000479397 MYCP01106 439 aaPredicted RBP7.2□□□□□ -1.26
CNOT10-215ENST00000479397 MMP14P50281 582 aa7.2□□□□□ -1.26
CNOT10-215ENST00000479397 GPSM2P81274 684 aa7.2□□□□□ -1.26
CNOT10-215ENST00000479397 PRKG1Q13976 671 aa7.2□□□□□ -1.26
CNOT10-215ENST00000479397 APOBEC3FQ8IUX4 373 aaKnown RBP7.2□□□□□ -1.26
CNOT10-215ENST00000479397 EFCAB3Q8N7B9 438 aa7.2□□□□□ -1.26
CNOT10-215ENST00000479397 SLAIN1Q8ND83 568 aa7.2□□□□□ -1.26
CNOT10-215ENST00000479397 PNISRQ8TF01 805 aaKnown RBP7.2□□□□□ -1.26
CNOT10-215ENST00000479397 PHACTR3Q96KR7 559 aa7.2□□□□□ -1.26
CNOT10-215ENST00000479397 STXBP5LQ9Y2K9 1186 aa7.2□□□□□ -1.26
CNOT10-215ENST00000479397 PTCH2Q9Y6C5 1203 aa7.2□□□□□ -1.26
CNOT10-215ENST00000479397 SPTBN5Q9NRC6 3674 aaKnown RBP7.19□□□□□ -1.26
CNOT10-215ENST00000479397 USP17L3A6NCW0 530 aa7.19□□□□□ -1.26
CNOT10-215ENST00000479397 USP17L4A6NCW7 530 aa7.19□□□□□ -1.26
CNOT10-215ENST00000479397 WNT10BO00744 389 aa7.19□□□□□ -1.26
CNOT10-215ENST00000479397 PPP1R12BO60237 982 aaPredicted RBP7.19□□□□□ -1.26
CNOT10-215ENST00000479397 UFL1O94874 794 aa7.19□□□□□ -1.26
CNOT10-215ENST00000479397 NBPF9Q3BBW0 867 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms