RNA–Protein interactions for RNA: ENST00000479381.5

CMTM1-208, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 995 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-208ENST00000479381 ABT1Q9ULW3 272 aaKnown RBP11.45□□□□□ -0.58
CMTM1-208ENST00000479381 PTPRCP08575 1304 aa11.44□□□□□ -0.58
CMTM1-208ENST00000479381 PSMD14O00487 310 aa11.44□□□□□ -0.58
CMTM1-208ENST00000479381 ATMINO43313 823 aaPredicted RBP11.44□□□□□ -0.58
CMTM1-208ENST00000479381 ALDH1L1O75891 902 aa11.44□□□□□ -0.58
CMTM1-208ENST00000479381 SCNN1DP51172 638 aa11.44□□□□□ -0.58
CMTM1-208ENST00000479381 GRM1Q13255 1194 aa11.44□□□□□ -0.58
CMTM1-208ENST00000479381 LMBR1LQ6UX01 489 aa11.44□□□□□ -0.58
CMTM1-208ENST00000479381 USP50Q70EL3 339 aaPredicted RBP11.44□□□□□ -0.58
CMTM1-208ENST00000479381 CNTROBQ8N137 903 aa11.44□□□□□ -0.58
CMTM1-208ENST00000479381 MRPL50Q8N5N7 158 aaKnown RBP11.44□□□□□ -0.58
CMTM1-208ENST00000479381 SSH1Q8WYL5 1049 aa11.44□□□□□ -0.58
CMTM1-208ENST00000479381 ANKRD2Q9GZV1 360 aa11.44□□□□□ -0.58
CMTM1-208ENST00000479381 BMP2KQ9NSY1 1161 aaPredicted RBP11.44□□□□□ -0.58
CMTM1-208ENST00000479381 BSDC1Q9NW68 430 aaPredicted RBP11.44□□□□□ -0.58
CMTM1-208ENST00000479381 GPRC5DQ9NZD1 345 aa11.44□□□□□ -0.58
CMTM1-208ENST00000479381 MKRN1Q9UHC7 482 aaKnown RBP11.44□□□□□ -0.58
CMTM1-208ENST00000479381 TRPC6Q9Y210 931 aa11.44□□□□□ -0.58
CMTM1-208ENST00000479381 COL4A1P02462 1669 aa11.43□□□□□ -0.58
CMTM1-208ENST00000479381 DUOX1Q9NRD9 1551 aa11.43□□□□□ -0.58
CMTM1-208ENST00000479381 CCT4P50991 539 aaKnown RBP11.43□□□□□ -0.58
CMTM1-208ENST00000479381 MICALL2Q8IY33 904 aa11.43□□□□□ -0.58
CMTM1-208ENST00000479381 KLRG1Q96E93 195 aa11.43□□□□□ -0.58
CMTM1-208ENST00000479381 TMEM106CQ9BVX2 250 aa11.43□□□□□ -0.58
CMTM1-208ENST00000479381 PLA2G12BQ9BX93 195 aa11.43□□□□□ -0.58
CMTM1-208ENST00000479381 PODXL2Q9NZ53 605 aa11.43□□□□□ -0.58
CMTM1-208ENST00000479381 CNOT7Q9UIV1 285 aaKnown RBP11.43□□□□□ -0.58
CMTM1-208ENST00000479381 MINPP1Q9UNW1 487 aa11.43□□□□□ -0.58
CMTM1-208ENST00000479381 TMEM88BA6NKF7 163 aa11.42□□□□□ -0.58
CMTM1-208ENST00000479381 YDJCA8MPS7 323 aa11.42□□□□□ -0.58
CMTM1-208ENST00000479381 ALDH1L2Q3SY69 923 aa11.42□□□□□ -0.58
CMTM1-208ENST00000479381 TBC1D10BQ4KMP7 808 aaPredicted RBP11.42□□□□□ -0.58
CMTM1-208ENST00000479381 RTL9Q8NET4 1388 aa11.41□□□□□ -0.58
CMTM1-208ENST00000479381 ZNF804BA4D1E1 1349 aa11.41□□□□□ -0.58
CMTM1-208ENST00000479381 TTLL13PA6NNM8 815 aa11.41□□□□□ -0.58
CMTM1-208ENST00000479381 CHRNDQ07001 517 aa11.41□□□□□ -0.58
CMTM1-208ENST00000479381 LDHAL6AQ6ZMR3 332 aa11.41□□□□□ -0.58
CMTM1-208ENST00000479381 HELBQ8NG08 1087 aaPredicted RBP11.41□□□□□ -0.58
CMTM1-208ENST00000479381 SUCLG2Q96I99 432 aa11.41□□□□□ -0.58
CMTM1-208ENST00000479381 API5Q9BZZ5 524 aaKnown RBP11.41□□□□□ -0.58
CMTM1-208ENST00000479381 LEMD3Q9Y2U8 911 aa11.41□□□□□ -0.58
CMTM1-208ENST00000479381 LTBP1Q14766 1721 aa11.4□□□□□ -0.58
CMTM1-208ENST00000479381 USP17L3A6NCW0 530 aa11.4□□□□□ -0.58
CMTM1-208ENST00000479381 USP17L4A6NCW7 530 aa11.4□□□□□ -0.58
CMTM1-208ENST00000479381 TAF5LO75529 589 aa11.4□□□□□ -0.58
CMTM1-208ENST00000479381 CT47B1P0C2W7 299 aaPredicted RBP11.4□□□□□ -0.58
CMTM1-208ENST00000479381 RPS12P25398 132 aaKnown RBP11.4□□□□□ -0.58
CMTM1-208ENST00000479381 ATN1P54259 1190 aaPredicted RBP11.4□□□□□ -0.58
CMTM1-208ENST00000479381 CASP7P55210 303 aa11.4□□□□□ -0.58
CMTM1-208ENST00000479381 USP17L1Q7RTZ2 530 aa11.4□□□□□ -0.58
CMTM1-208ENST00000479381 SAMD7Q7Z3H4 446 aa11.4□□□□□ -0.58
CMTM1-208ENST00000479381 SLC39A7Q92504 469 aa11.4□□□□□ -0.58
CMTM1-208ENST00000479381 FRAT1Q92837 279 aaPredicted RBP11.4□□□□□ -0.58
CMTM1-208ENST00000479381 DCPSQ96C86 337 aaKnown RBP11.4□□□□□ -0.58
CMTM1-208ENST00000479381 ZNF594Q96JF6 807 aaPredicted RBP11.4□□□□□ -0.58
CMTM1-208ENST00000479381 NOB1Q9ULX3 412 aaKnown RBP11.4□□□□□ -0.58
CMTM1-208ENST00000479381 MED23Q9ULK4 1368 aa11.4□□□□□ -0.59
CMTM1-208ENST00000479381 KIF16BQ96L93 1317 aa11.39□□□□□ -0.59
CMTM1-208ENST00000479381 SHTN1A0MZ66 631 aa11.39□□□□□ -0.59
CMTM1-208ENST00000479381 CSF1RP07333 972 aa11.39□□□□□ -0.59
CMTM1-208ENST00000479381 FOXO4P98177 505 aa11.39□□□□□ -0.59
CMTM1-208ENST00000479381 KIF4BQ2VIQ3 1234 aa11.39□□□□□ -0.59
CMTM1-208ENST00000479381 PODNQ7Z5L7 613 aa11.39□□□□□ -0.59
CMTM1-208ENST00000479381 VPS37DQ86XT2 251 aa11.39□□□□□ -0.59
CMTM1-208ENST00000479381 TRPM4Q8TD43 1214 aa11.39□□□□□ -0.59
CMTM1-208ENST00000479381 KCNQ5Q9NR82 932 aa11.39□□□□□ -0.59
CMTM1-208ENST00000479381 TRAF5O00463 557 aa11.38□□□□□ -0.59
CMTM1-208ENST00000479381 FRAT2O75474 233 aaPredicted RBP11.38□□□□□ -0.59
CMTM1-208ENST00000479381 ECM2O94769 699 aaPredicted RBP11.38□□□□□ -0.59
CMTM1-208ENST00000479381 CELF2O95319 508 aaKnown RBP11.38□□□□□ -0.59
CMTM1-208ENST00000479381 NBPF7P0C2Y1 421 aaPredicted RBP11.38□□□□□ -0.59
CMTM1-208ENST00000479381 UBTFL1P0CB47 393 aaPredicted RBP11.38□□□□□ -0.59
CMTM1-208ENST00000479381 METTL24Q5JXM2 366 aa11.38□□□□□ -0.59
CMTM1-208ENST00000479381 EPHA10Q5JZY3 1008 aa11.38□□□□□ -0.59
CMTM1-208ENST00000479381 RSBN1LQ6PCB5 846 aaPredicted RBP11.38□□□□□ -0.59
CMTM1-208ENST00000479381 ZNF804AQ7Z570 1209 aa11.38□□□□□ -0.59
CMTM1-208ENST00000479381 OGFOD1Q8N543 542 aa11.38□□□□□ -0.59
CMTM1-208ENST00000479381 DPF2Q92785 391 aa11.38□□□□□ -0.59
CMTM1-208ENST00000479381 AIDAQ96BJ3 306 aa11.38□□□□□ -0.59
CMTM1-208ENST00000479381 GLIS2Q9BZE0 524 aaPredicted RBP11.38□□□□□ -0.59
CMTM1-208ENST00000479381 COA1Q9GZY4 146 aa11.38□□□□□ -0.59
CMTM1-208ENST00000479381 BICC1Q9H694 974 aaKnown RBP11.38□□□□□ -0.59
CMTM1-208ENST00000479381 HDAC9Q9UKV0 1011 aa11.38□□□□□ -0.59
CMTM1-208ENST00000479381 HDAC5Q9UQL6 1122 aa11.38□□□□□ -0.59
CMTM1-208ENST00000479381 IPO8O15397 1037 aaKnown RBP11.37□□□□□ -0.59
CMTM1-208ENST00000479381 DEFB115Q30KQ5 88 aa11.37□□□□□ -0.59
CMTM1-208ENST00000479381 CDC37L1Q7L3B6 337 aa11.37□□□□□ -0.59
CMTM1-208ENST00000479381 SULF1Q8IWU6 871 aa11.37□□□□□ -0.59
CMTM1-208ENST00000479381 PASKQ96RG2 1323 aa11.36□□□□□ -0.59
CMTM1-208ENST00000479381 ITGBL1O95965 494 aaPredicted RBP11.36□□□□□ -0.59
CMTM1-208ENST00000479381 VIL1P09327 827 aaKnown RBP11.36□□□□□ -0.59
CMTM1-208ENST00000479381 USP17L8P0C7I0 530 aa11.36□□□□□ -0.59
CMTM1-208ENST00000479381 C7P10643 843 aa11.36□□□□□ -0.59
CMTM1-208ENST00000479381 GTF2IP78347 998 aa11.36□□□□□ -0.59
CMTM1-208ENST00000479381 PDAP1Q13442 181 aaKnown RBP11.36□□□□□ -0.59
CMTM1-208ENST00000479381 TTLL5Q6EMB2 1281 aa11.36□□□□□ -0.59
CMTM1-208ENST00000479381 KRT26Q7Z3Y9 468 aa11.36□□□□□ -0.59
CMTM1-208ENST00000479381 USP48Q86UV5 1035 aa11.36□□□□□ -0.59
CMTM1-208ENST00000479381 AGBL3Q8NEM8 1001 aa11.36□□□□□ -0.59
CMTM1-208ENST00000479381 GGA3Q9NZ52 723 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms