RNA–Protein interactions for RNA: ENST00000479335.5

RAD51B-208, Transcript of RAD51 paralog B, humanhuman

TSL 1 (best)

Gene RAD51B, Length 1,615 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD51B-208ENST00000479335 CYP46A1Q9Y6A2 500 aa11.81□□□□□ -0.52
RAD51B-208ENST00000479335 COL24A1Q17RW2 1714 aa11.81□□□□□ -0.52
RAD51B-208ENST00000479335 ARAP2Q8WZ64 1704 aa11.81□□□□□ -0.52
RAD51B-208ENST00000479335 FKBP4Q02790 459 aaKnown RBP eCLIP11.8□□□□□ -0.52
RAD51B-208ENST00000479335 CLEC17AQ6ZS10 378 aa11.8□□□□□ -0.52
RAD51B-208ENST00000479335 RUFY3Q7L099 469 aa11.8□□□□□ -0.52
RAD51B-208ENST00000479335 ANKRD18AQ8IVF6 992 aa11.8□□□□□ -0.52
RAD51B-208ENST00000479335 ZSCAN31Q96LW9 406 aaPredicted RBP11.8□□□□□ -0.52
RAD51B-208ENST00000479335 NLRP3Q96P20 1036 aa11.8□□□□□ -0.52
RAD51B-208ENST00000479335 UPF3BQ9BZI7 483 aaKnown RBP11.8□□□□□ -0.52
RAD51B-208ENST00000479335 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.8□□□□□ -0.527e-9■■■■■ 54
RAD51B-208ENST00000479335 BSDC1Q9NW68 430 aaPredicted RBP11.8□□□□□ -0.52
RAD51B-208ENST00000479335 NDUFB9Q9Y6M9 179 aa11.8□□□□□ -0.52
RAD51B-208ENST00000479335 CASTP20810 708 aaKnown RBP11.79□□□□□ -0.52
RAD51B-208ENST00000479335 PTMSP20962 102 aa11.79□□□□□ -0.52
RAD51B-208ENST00000479335 ZAP70P43403 619 aa11.79□□□□□ -0.52
RAD51B-208ENST00000479335 CCDC102BQ68D86 513 aa11.79□□□□□ -0.52
RAD51B-208ENST00000479335 NBPF5PQ86XG9 351 aaPredicted RBP11.79□□□□□ -0.52
RAD51B-208ENST00000479335 LRRC4BQ9NT99 713 aa11.79□□□□□ -0.52
RAD51B-208ENST00000479335 LIMCH1Q9UPQ0 1083 aa11.79□□□□□ -0.52
RAD51B-208ENST00000479335 AKAP11Q9UKA4 1901 aa11.79□□□□□ -0.52
RAD51B-208ENST00000479335 RPAP1Q9BWH6 1393 aaPredicted RBP11.79□□□□□ -0.52
RAD51B-208ENST00000479335 BRWD3Q6RI45 1802 aa11.79□□□□□ -0.52
RAD51B-208ENST00000479335 MCM4P33991 863 aa11.78□□□□□ -0.52
RAD51B-208ENST00000479335 MCAMP43121 646 aa11.78□□□□□ -0.52
RAD51B-208ENST00000479335 UBE4AQ14139 1066 aa11.78□□□□□ -0.52
RAD51B-208ENST00000479335 ANKRD1Q15327 319 aa11.78□□□□□ -0.52
RAD51B-208ENST00000479335 JAKMIP1Q96N16 626 aaKnown RBP11.78□□□□□ -0.52
RAD51B-208ENST00000479335 GBP4Q96PP9 640 aa11.78□□□□□ -0.52
RAD51B-208ENST00000479335 SRP68Q9UHB9 627 aaKnown RBP11.78□□□□□ -0.52
RAD51B-208ENST00000479335 CHRNDQ07001 517 aa11.78□□□□□ -0.52
RAD51B-208ENST00000479335 SCARF1Q14162 830 aa11.78□□□□□ -0.52
RAD51B-208ENST00000479335 BICDL1Q6ZP65 573 aa11.78□□□□□ -0.52
RAD51B-208ENST00000479335 APPBP2Q92624 585 aa11.78□□□□□ -0.52
RAD51B-208ENST00000479335 SEC62Q99442 399 aaKnown RBP11.78□□□□□ -0.52
RAD51B-208ENST00000479335 SH2B1Q9NRF2 756 aaPredicted RBP11.78□□□□□ -0.52
RAD51B-208ENST00000479335 PDRG1Q9NUG6 133 aa11.78□□□□□ -0.52
RAD51B-208ENST00000479335 PLSCR1O15162 318 aa11.77□□□□□ -0.53
RAD51B-208ENST00000479335 CYP2E1P05181 493 aaPredicted RBP11.77□□□□□ -0.53
RAD51B-208ENST00000479335 PHKA1P46020 1223 aa11.77□□□□□ -0.53
RAD51B-208ENST00000479335 AK2P54819 239 aa11.77□□□□□ -0.53
RAD51B-208ENST00000479335 UBE3CQ15386 1083 aa11.77□□□□□ -0.53
RAD51B-208ENST00000479335 ADCK5Q3MIX3 580 aa11.77□□□□□ -0.53
RAD51B-208ENST00000479335 BLOC1S2Q6QNY1 142 aa11.77□□□□□ -0.53
RAD51B-208ENST00000479335 HELBQ8NG08 1087 aaPredicted RBP11.77□□□□□ -0.53
RAD51B-208ENST00000479335 TNPO1Q92973 898 aaKnown RBP11.77□□□□□ -0.53
RAD51B-208ENST00000479335 C4AP0C0L4 1744 aa11.77□□□□□ -0.53
RAD51B-208ENST00000479335 MYH7P12883 1935 aa11.77□□□□□ -0.53
RAD51B-208ENST00000479335 CARMIL3Q8ND23 1372 aa11.76□□□□□ -0.53
RAD51B-208ENST00000479335 MAST3O60307 1309 aa11.76□□□□□ -0.53
RAD51B-208ENST00000479335 DDX11L8A8MPP1 907 aa11.76□□□□□ -0.53
RAD51B-208ENST00000479335 HMGB1P09429 215 aaKnown RBP11.76□□□□□ -0.53
RAD51B-208ENST00000479335 HSPD1P10809 573 aaKnown RBP11.76□□□□□ -0.53
RAD51B-208ENST00000479335 RPS8P62241 208 aaKnown RBP11.76□□□□□ -0.53
RAD51B-208ENST00000479335 ANKRD2Q9GZV1 360 aa11.76□□□□□ -0.53
RAD51B-208ENST00000479335 CTNNA3Q9UI47 895 aa11.76□□□□□ -0.53
RAD51B-208ENST00000479335 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.76□□□□□ -0.53
RAD51B-208ENST00000479335 UBR3Q6ZT12 1888 aa11.76□□□□□ -0.53
RAD51B-208ENST00000479335 TRIM37O94972 964 aa11.75□□□□□ -0.53
RAD51B-208ENST00000479335 PDIA4P13667 645 aaKnown RBP11.75□□□□□ -0.53
RAD51B-208ENST00000479335 RPS6KB1P23443 525 aa11.75□□□□□ -0.53
RAD51B-208ENST00000479335 ADD2P35612 726 aa11.75□□□□□ -0.53
RAD51B-208ENST00000479335 CCDC129Q6ZRS4 1044 aa11.75□□□□□ -0.53
RAD51B-208ENST00000479335 AMIGO3Q86WK7 504 aa11.75□□□□□ -0.53
RAD51B-208ENST00000479335 SPATA5Q8NB90 893 aa11.75□□□□□ -0.53
RAD51B-208ENST00000479335 OSBP2Q969R2 916 aa11.75□□□□□ -0.53
RAD51B-208ENST00000479335 GNL3LQ9NVN8 582 aaKnown RBP11.75□□□□□ -0.53
RAD51B-208ENST00000479335 MINPP1Q9UNW1 487 aa11.75□□□□□ -0.53
RAD51B-208ENST00000479335 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.75□□□□□ -0.53
RAD51B-208ENST00000479335 CYP21A2P08686 494 aa11.75□□□□□ -0.53
RAD51B-208ENST00000479335 NFIXQ14938 502 aa11.75□□□□□ -0.53
RAD51B-208ENST00000479335 WASHC4Q2M389 1173 aa11.75□□□□□ -0.53
RAD51B-208ENST00000479335 C3orf67Q6ZVT6 689 aa11.75□□□□□ -0.53
RAD51B-208ENST00000479335 SMIM5Q71RC9 77 aa11.75□□□□□ -0.53
RAD51B-208ENST00000479335 ZGPATQ8N5A5 531 aaKnown RBP11.75□□□□□ -0.53
RAD51B-208ENST00000479335 NEK1Q96PY6 1258 aa11.75□□□□□ -0.53
RAD51B-208ENST00000479335 CASZ1Q86V15 1759 aa11.75□□□□□ -0.53
RAD51B-208ENST00000479335 ZNF804BA4D1E1 1349 aa11.74□□□□□ -0.53
RAD51B-208ENST00000479335 M0R2C6 588 aa11.74□□□□□ -0.53
RAD51B-208ENST00000479335 IGSF3O75054 1194 aa11.74□□□□□ -0.53
RAD51B-208ENST00000479335 CHGBP05060 677 aa11.74□□□□□ -0.53
RAD51B-208ENST00000479335 TM4SF1P30408 202 aa11.74□□□□□ -0.53
RAD51B-208ENST00000479335 MAP3K12Q12852 859 aa11.74□□□□□ -0.53
RAD51B-208ENST00000479335 TXNRD1Q16881 649 aa11.74□□□□□ -0.53
RAD51B-208ENST00000479335 RNF39Q9H2S5 420 aa11.74□□□□□ -0.53
RAD51B-208ENST00000479335 ATF5Q9Y2D1 282 aaPredicted RBP11.74□□□□□ -0.53
RAD51B-208ENST00000479335 GOLGA6L22H0YM25 854 aa11.73□□□□□ -0.53
RAD51B-208ENST00000479335 SEMA3EO15041 775 aa11.73□□□□□ -0.53
RAD51B-208ENST00000479335 PHF14O94880 888 aa11.73□□□□□ -0.53
RAD51B-208ENST00000479335 GYS1P13807 737 aa11.73□□□□□ -0.53
RAD51B-208ENST00000479335 RASGRF1Q13972 1273 aa11.73□□□□□ -0.53
RAD51B-208ENST00000479335 CAVIN4Q5BKX8 364 aa11.73□□□□□ -0.53
RAD51B-208ENST00000479335 SLC9C2Q5TAH2 1124 aa11.73□□□□□ -0.53
RAD51B-208ENST00000479335 TMED8Q6PL24 325 aaPredicted RBP11.73□□□□□ -0.53
RAD51B-208ENST00000479335 PI16Q6UXB8 463 aa11.73□□□□□ -0.53
RAD51B-208ENST00000479335 CELF1Q92879 486 aaKnown RBP11.73□□□□□ -0.53
RAD51B-208ENST00000479335 PIH1D3Q9NQM4 214 aaKnown RBP11.73□□□□□ -0.53
RAD51B-208ENST00000479335 A0A1B0GUL6 1792 aa11.73□□□□□ -0.53
RAD51B-208ENST00000479335 PDE6AP16499 860 aa11.72□□□□□ -0.53
RAD51B-208ENST00000479335 BCAMP50895 628 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms